RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RAPGEF4Q8WZA2 1011 aa14.1□□□□□ -0.15
SDF2-208ENST00000589788 APBA3O96018 575 aa14.09□□□□□ -0.15
SDF2-208ENST00000589788 TPRNQ4KMQ1 711 aa14.09□□□□□ -0.15
SDF2-208ENST00000589788 CC2D1BQ5T0F9 858 aaKnown RBP14.09□□□□□ -0.15
SDF2-208ENST00000589788 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
SDF2-208ENST00000589788 CNGB1Q14028 1251 aaPredicted RBP14.08□□□□□ -0.16
SDF2-208ENST00000589788 TMEM106CQ9BVX2 250 aa14.08□□□□□ -0.16
SDF2-208ENST00000589788 SBF2Q86WG5 1849 aa14.08□□□□□ -0.16
SDF2-208ENST00000589788 TATP17735 454 aaPredicted RBP14.07□□□□□ -0.16
SDF2-208ENST00000589788 EN1Q05925 392 aaPredicted RBP14.07□□□□□ -0.16
SDF2-208ENST00000589788 DDX54Q8TDD1 881 aaKnown RBP14.07□□□□□ -0.16
SDF2-208ENST00000589788 MEGF6O75095 1541 aa14.06□□□□□ -0.16
SDF2-208ENST00000589788 BCL9O00512 1426 aa14.06□□□□□ -0.16
SDF2-208ENST00000589788 ZCRB1Q8TBF4 217 aaKnown RBP14.06□□□□□ -0.16
SDF2-208ENST00000589788 KAT6BQ8WYB5 2073 aa14.05□□□□□ -0.16
SDF2-208ENST00000589788 NPC1L1Q9UHC9 1359 aa14.05□□□□□ -0.16
SDF2-208ENST00000589788 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
SDF2-208ENST00000589788 EYA1Q99502 592 aa14.04□□□□□ -0.16
SDF2-208ENST00000589788 PARD3Q8TEW0 1356 aa14.04□□□□□ -0.16
SDF2-208ENST00000589788 EZH2Q15910 746 aaKnown RBP14.03□□□□□ -0.16
SDF2-208ENST00000589788 KCNV2Q8TDN2 545 aa14.03□□□□□ -0.16
SDF2-208ENST00000589788 ACSBG1Q96GR2 724 aa14.03□□□□□ -0.16
SDF2-208ENST00000589788 MTHFSP49914 203 aa14.02□□□□□ -0.17
SDF2-208ENST00000589788 CAMKK2Q96RR4 588 aa14.02□□□□□ -0.17
SDF2-208ENST00000589788 SHANK3Q9BYB0 1731 aa14.02□□□□□ -0.17
SDF2-208ENST00000589788 NCAPD2Q15021 1401 aa14.02□□□□□ -0.17
SDF2-208ENST00000589788 NHSQ6T4R5 1651 aa14.01□□□□□ -0.17
SDF2-208ENST00000589788 PTF1AQ7RTS3 328 aa14.01□□□□□ -0.17
SDF2-208ENST00000589788 PCDH11XQ9BZA7 1347 aa14.01□□□□□ -0.17
SDF2-208ENST00000589788 PCDH11YQ9BZA8 1340 aa14.01□□□□□ -0.17
SDF2-208ENST00000589788 KCNQ2O43526 872 aa14□□□□□ -0.17
SDF2-208ENST00000589788 TIE1P35590 1138 aa14□□□□□ -0.17
SDF2-208ENST00000589788 SPG7Q9UQ90 795 aa14□□□□□ -0.17
SDF2-208ENST00000589788 IGSF1Q8N6C5 1336 aa14□□□□□ -0.17
SDF2-208ENST00000589788 PLSCR1O15162 318 aa13.99□□□□□ -0.17
SDF2-208ENST00000589788 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
SDF2-208ENST00000589788 RGPD3A6NKT7 1758 aaPredicted RBP13.99□□□□□ -0.17
SDF2-208ENST00000589788 RGPD4Q7Z3J3 1758 aa13.99□□□□□ -0.17
SDF2-208ENST00000589788 PKD1L3Q7Z443 1732 aa13.98□□□□□ -0.17
SDF2-208ENST00000589788 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
SDF2-208ENST00000589788 RREB1Q92766 1687 aa13.98□□□□□ -0.17
SDF2-208ENST00000589788 TTLL13PA6NNM8 815 aa13.98□□□□□ -0.17
SDF2-208ENST00000589788 IL13P35225 146 aa13.97□□□□□ -0.17
SDF2-208ENST00000589788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.97□□□□□ -0.17
SDF2-208ENST00000589788 BTAF1O14981 1849 aa13.97□□□□□ -0.17
SDF2-208ENST00000589788 NUP188Q5SRE5 1749 aa13.97□□□□□ -0.17
SDF2-208ENST00000589788 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
SDF2-208ENST00000589788 DIAPH1O60610 1272 aaKnown RBP13.96□□□□□ -0.17
SDF2-208ENST00000589788 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
SDF2-208ENST00000589788 EVX2Q03828 476 aa13.96□□□□□ -0.17
SDF2-208ENST00000589788 BMP2KQ9NSY1 1161 aaPredicted RBP13.96□□□□□ -0.17
SDF2-208ENST00000589788 PLEKHG2Q9H7P9 1386 aa13.96□□□□□ -0.18
SDF2-208ENST00000589788 CYP27B1O15528 508 aa13.95□□□□□ -0.18
SDF2-208ENST00000589788 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
SDF2-208ENST00000589788 SULT6B1Q6IMI4 303 aa13.95□□□□□ -0.18
SDF2-208ENST00000589788 CFAP53Q96M91 514 aa13.95□□□□□ -0.18
SDF2-208ENST00000589788 PSDA5PKW4 1024 aaPredicted RBP13.94□□□□□ -0.18
SDF2-208ENST00000589788 GOLGA2Q08379 1002 aa13.94□□□□□ -0.18
SDF2-208ENST00000589788 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
SDF2-208ENST00000589788 PLEKHO1Q53GL0 409 aaPredicted RBP13.94□□□□□ -0.18
SDF2-208ENST00000589788 AEBP1Q8IUX7 1158 aa13.94□□□□□ -0.18
SDF2-208ENST00000589788 WDR70Q9NW82 654 aa13.94□□□□□ -0.18
SDF2-208ENST00000589788 R3HDM1Q15032 1099 aaKnown RBP13.93□□□□□ -0.18
SDF2-208ENST00000589788 TXNRD1Q16881 649 aa13.93□□□□□ -0.18
SDF2-208ENST00000589788 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
SDF2-208ENST00000589788 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
SDF2-208ENST00000589788 AMOTQ4VCS5 1084 aa13.92□□□□□ -0.18
SDF2-208ENST00000589788 KDRP35968 1356 aa13.92□□□□□ -0.18
SDF2-208ENST00000589788 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
SDF2-208ENST00000589788 HMOX1P09601 288 aa13.91□□□□□ -0.18
SDF2-208ENST00000589788 PHKG2P15735 406 aa13.91□□□□□ -0.18
SDF2-208ENST00000589788 MKRN3Q13064 507 aaKnown RBP13.91□□□□□ -0.18
SDF2-208ENST00000589788 ZNF530Q6P9A1 599 aaPredicted RBP13.91□□□□□ -0.18
SDF2-208ENST00000589788 COL3A1P02461 1466 aaPredicted RBP13.91□□□□□ -0.18
SDF2-208ENST00000589788 C1orf141Q5JVX7 400 aa13.9□□□□□ -0.18
SDF2-208ENST00000589788 MPRIPQ6WCQ1 1025 aa13.9□□□□□ -0.18
SDF2-208ENST00000589788 ITGB4P16144 1822 aa13.9□□□□□ -0.18
SDF2-208ENST00000589788 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
SDF2-208ENST00000589788 HSP90AB1P08238 724 aaKnown RBP13.9□□□□□ -0.19
SDF2-208ENST00000589788 STK32BQ9NY57 414 aa13.89□□□□□ -0.19
SDF2-208ENST00000589788 NUDCQ9Y266 331 aa13.89□□□□□ -0.19
SDF2-208ENST00000589788 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
SDF2-208ENST00000589788 HAX1O00165 279 aa13.88□□□□□ -0.19
SDF2-208ENST00000589788 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
SDF2-208ENST00000589788 DCAF5Q96JK2 942 aa13.88□□□□□ -0.19
SDF2-208ENST00000589788 CRISPLD2Q9H0B8 497 aa13.88□□□□□ -0.19
SDF2-208ENST00000589788 TMOD3Q9NYL9 352 aa13.88□□□□□ -0.19
SDF2-208ENST00000589788 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
SDF2-208ENST00000589788 LY75O60449 1722 aa13.87□□□□□ -0.19
SDF2-208ENST00000589788 SMARCC1Q92922 1105 aaPredicted RBP13.87□□□□□ -0.19
SDF2-208ENST00000589788 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
SDF2-208ENST00000589788 MFSD10Q14728 455 aa13.86□□□□□ -0.19
SDF2-208ENST00000589788 RALBP1Q15311 655 aa13.86□□□□□ -0.19
SDF2-208ENST00000589788 PIGBQ92521 554 aa13.86□□□□□ -0.19
SDF2-208ENST00000589788 CCNL1Q9UK58 526 aaPredicted RBP13.86□□□□□ -0.19
SDF2-208ENST00000589788 PALLDQ8WX93 1383 aa13.85□□□□□ -0.19
SDF2-208ENST00000589788 ERVV-2B6SEH9 535 aa13.85□□□□□ -0.19
SDF2-208ENST00000589788 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
SDF2-208ENST00000589788 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.19
SDF2-208ENST00000589788 SLC15A2Q16348 729 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms