RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 BTAF1O14981 1849 aa13.27□□□□□ -0.29
APOC1-205ENST00000589781 PAPPAQ13219 1627 aa13.26□□□□□ -0.29
APOC1-205ENST00000589781 TOGARAM1Q9Y4F4 1720 aa13.26□□□□□ -0.29
APOC1-205ENST00000589781 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
APOC1-205ENST00000589781 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
APOC1-205ENST00000589781 THUMPD2Q9BTF0 503 aaKnown RBP13.25□□□□□ -0.29
APOC1-205ENST00000589781 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
APOC1-205ENST00000589781 NKX1-1Q15270 411 aaPredicted RBP13.24□□□□□ -0.29
APOC1-205ENST00000589781 ZNF827Q17R98 1081 aa13.24□□□□□ -0.29
APOC1-205ENST00000589781 MYH16Q9H6N6 1097 aa13.24□□□□□ -0.29
APOC1-205ENST00000589781 IL16Q14005 1332 aa13.23□□□□□ -0.29
APOC1-205ENST00000589781 PCDH11XQ9BZA7 1347 aa13.23□□□□□ -0.29
APOC1-205ENST00000589781 PCDH11YQ9BZA8 1340 aa13.23□□□□□ -0.29
APOC1-205ENST00000589781 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
APOC1-205ENST00000589781 LRP5O75197 1615 aa13.22□□□□□ -0.29
APOC1-205ENST00000589781 PHKG2P15735 406 aa13.22□□□□□ -0.29
APOC1-205ENST00000589781 LMOD3Q0VAK6 560 aa13.22□□□□□ -0.29
APOC1-205ENST00000589781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.29
APOC1-205ENST00000589781 PLIN1O60240 522 aa13.21□□□□□ -0.29
APOC1-205ENST00000589781 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
APOC1-205ENST00000589781 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.29
APOC1-205ENST00000589781 CASZ1Q86V15 1759 aa13.21□□□□□ -0.29
APOC1-205ENST00000589781 SLC15A2Q16348 729 aa13.2□□□□□ -0.3
APOC1-205ENST00000589781 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
APOC1-205ENST00000589781 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
APOC1-205ENST00000589781 PIGBQ92521 554 aa13.2□□□□□ -0.3
APOC1-205ENST00000589781 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
APOC1-205ENST00000589781 LY75O60449 1722 aa13.19□□□□□ -0.3
APOC1-205ENST00000589781 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
APOC1-205ENST00000589781 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
APOC1-205ENST00000589781 CALD1Q05682 793 aaKnown RBP13.18□□□□□ -0.3
APOC1-205ENST00000589781 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
APOC1-205ENST00000589781 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
APOC1-205ENST00000589781 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
APOC1-205ENST00000589781 SPG7Q9UQ90 795 aa13.18□□□□□ -0.3
APOC1-205ENST00000589781 MAP3K5Q99683 1374 aa13.18□□□□□ -0.3
APOC1-205ENST00000589781 BCAR3O75815 825 aa13.17□□□□□ -0.3
APOC1-205ENST00000589781 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
APOC1-205ENST00000589781 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
APOC1-205ENST00000589781 MCM10Q7L590 875 aa13.17□□□□□ -0.3
APOC1-205ENST00000589781 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
APOC1-205ENST00000589781 IFT57Q9NWB7 429 aa13.17□□□□□ -0.3
APOC1-205ENST00000589781 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
APOC1-205ENST00000589781 ITGB4P16144 1822 aa13.16□□□□□ -0.3
APOC1-205ENST00000589781 PTGER2P43116 358 aa13.16□□□□□ -0.3
APOC1-205ENST00000589781 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
APOC1-205ENST00000589781 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
APOC1-205ENST00000589781 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
APOC1-205ENST00000589781 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
APOC1-205ENST00000589781 ZBTB7AO95365 584 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
APOC1-205ENST00000589781 GNAI1P63096 354 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 STK32BQ9NY57 414 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
APOC1-205ENST00000589781 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.31
APOC1-205ENST00000589781 PNPLA7Q6ZV29 1317 aa13.14□□□□□ -0.31
APOC1-205ENST00000589781 PLEKHO1Q53GL0 409 aaPredicted RBP13.14□□□□□ -0.31
APOC1-205ENST00000589781 ZNF530Q6P9A1 599 aaPredicted RBP13.14□□□□□ -0.31
APOC1-205ENST00000589781 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
APOC1-205ENST00000589781 ATG3Q9NT62 314 aa13.14□□□□□ -0.31
APOC1-205ENST00000589781 KAT6BQ8WYB5 2073 aa13.13□□□□□ -0.31
APOC1-205ENST00000589781 SIPA1L3O60292 1781 aaPredicted RBP13.13□□□□□ -0.31
APOC1-205ENST00000589781 ADAMTS7Q9UKP4 1686 aa13.13□□□□□ -0.31
APOC1-205ENST00000589781 ITPK1Q13572 414 aa13.13□□□□□ -0.31
APOC1-205ENST00000589781 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
APOC1-205ENST00000589781 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
APOC1-205ENST00000589781 LGR6Q9HBX8 967 aa13.13□□□□□ -0.31
APOC1-205ENST00000589781 CCNL1Q9UK58 526 aaPredicted RBP13.13□□□□□ -0.31
APOC1-205ENST00000589781 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
APOC1-205ENST00000589781 TUBGCP6Q96RT7 1819 aa13.12□□□□□ -0.31
APOC1-205ENST00000589781 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
APOC1-205ENST00000589781 CT47B1P0C2W7 299 aaPredicted RBP13.12□□□□□ -0.31
APOC1-205ENST00000589781 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
APOC1-205ENST00000589781 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
APOC1-205ENST00000589781 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
APOC1-205ENST00000589781 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
APOC1-205ENST00000589781 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
APOC1-205ENST00000589781 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
APOC1-205ENST00000589781 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
APOC1-205ENST00000589781 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
APOC1-205ENST00000589781 ERVV-2B6SEH9 535 aa13.1□□□□□ -0.31
APOC1-205ENST00000589781 COL23A1Q86Y22 540 aaPredicted RBP13.1□□□□□ -0.31
APOC1-205ENST00000589781 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
APOC1-205ENST00000589781 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
APOC1-205ENST00000589781 TMOD3Q9NYL9 352 aa13.1□□□□□ -0.31
APOC1-205ENST00000589781 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
APOC1-205ENST00000589781 LOC102724428A0A0B4J2F2 783 aa13.09□□□□□ -0.31
APOC1-205ENST00000589781 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
APOC1-205ENST00000589781 SIK1P57059 783 aa13.09□□□□□ -0.31
APOC1-205ENST00000589781 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
APOC1-205ENST00000589781 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
APOC1-205ENST00000589781 CHL1O00533 1208 aa13.08□□□□□ -0.32
APOC1-205ENST00000589781 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms