RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 GNAT3A8MTJ3 354 aa21.86■■□□□ 1.09
DNMT1-221ENST00000589538 ZNF827Q17R98 1081 aa21.86■■□□□ 1.09
DNMT1-221ENST00000589538 NFATC2IPQ8NCF5 419 aa21.86■■□□□ 1.09
DNMT1-221ENST00000589538 PRKRIP1Q9H875 184 aaPredicted RBP21.86■■□□□ 1.09
DNMT1-221ENST00000589538 SLC52A2Q9HAB3 445 aa21.86■■□□□ 1.09
DNMT1-221ENST00000589538 ZNF831Q5JPB2 1677 aa21.85■■□□□ 1.09
DNMT1-221ENST00000589538 MRC1P22897 1456 aa21.85■■□□□ 1.09
DNMT1-221ENST00000589538 KCNQ4P56696 695 aa21.85■■□□□ 1.09
DNMT1-221ENST00000589538 TFCP2L1Q9NZI6 479 aa21.85■■□□□ 1.09
DNMT1-221ENST00000589538 LGR6Q9HBX8 967 aa21.84■■□□□ 1.09
DNMT1-221ENST00000589538 SPON1Q9HCB6 807 aa21.84■■□□□ 1.09
DNMT1-221ENST00000589538 PHACTR3Q96KR7 559 aa21.83■■□□□ 1.09
DNMT1-221ENST00000589538 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
DNMT1-221ENST00000589538 ATP6V1AP38606 617 aa21.81■■□□□ 1.08
DNMT1-221ENST00000589538 SLC16A10Q8TF71 515 aa21.81■■□□□ 1.08
DNMT1-221ENST00000589538 TEFQ10587 303 aa21.8■■□□□ 1.08
DNMT1-221ENST00000589538 FLAD1Q8NFF5 587 aa21.8■■□□□ 1.08
DNMT1-221ENST00000589538 RBM42Q9BTD8 480 aaKnown RBP21.8■■□□□ 1.08
DNMT1-221ENST00000589538 TUBGCP6Q96RT7 1819 aa21.8■■□□□ 1.08
DNMT1-221ENST00000589538 HTATSF1O43719 755 aaKnown RBP21.79■■□□□ 1.08
DNMT1-221ENST00000589538 RTF1Q92541 710 aaKnown RBP21.79■■□□□ 1.08
DNMT1-221ENST00000589538 AK7Q96M32 723 aa21.79■■□□□ 1.08
DNMT1-221ENST00000589538 MTFR1LQ9H019 292 aa21.79■■□□□ 1.08
DNMT1-221ENST00000589538 MAPK8IP3Q9UPT6 1336 aa21.79■■□□□ 1.08
DNMT1-221ENST00000589538 PNPLA7Q6ZV29 1317 aa21.78■■□□□ 1.08
DNMT1-221ENST00000589538 CEMIPQ8WUJ3 1361 aa21.77■■□□□ 1.08
DNMT1-221ENST00000589538 WDR43Q15061 677 aaKnown RBP eCLIP21.77■■□□□ 1.08
DNMT1-221ENST00000589538 IL17REQ8NFR9 667 aa21.77■■□□□ 1.08
DNMT1-221ENST00000589538 PDGFDQ9GZP0 370 aaPredicted RBP21.77■■□□□ 1.08
DNMT1-221ENST00000589538 ZBTB7AO95365 584 aa21.76■■□□□ 1.07
DNMT1-221ENST00000589538 LINC00116Q8NCU8 138 aa21.76■■□□□ 1.07
DNMT1-221ENST00000589538 PLEKHF1Q96S99 279 aa21.76■■□□□ 1.07
DNMT1-221ENST00000589538 CICQ96RK0 1608 aaPredicted RBP21.76■■□□□ 1.07
DNMT1-221ENST00000589538 SRCAPQ6ZRS2 3230 aa21.76■■□□□ 1.07
DNMT1-221ENST00000589538 PTCD1O75127 700 aaKnown RBP21.75■■□□□ 1.07
DNMT1-221ENST00000589538 ITPK1Q13572 414 aa21.75■■□□□ 1.07
DNMT1-221ENST00000589538 SIPA1L3O60292 1781 aaPredicted RBP21.74■■□□□ 1.07
DNMT1-221ENST00000589538 RC3H1Q5TC82 1133 aaKnown RBP21.74■■□□□ 1.07
DNMT1-221ENST00000589538 TTC5Q8N0Z6 440 aa21.74■■□□□ 1.07
DNMT1-221ENST00000589538 PPP1R1BQ9UD71 204 aaPredicted RBP21.74■■□□□ 1.07
DNMT1-221ENST00000589538 UBR3Q6ZT12 1888 aa21.73■■□□□ 1.07
DNMT1-221ENST00000589538 COL5A3P25940 1745 aaPredicted RBP21.73■■□□□ 1.07
DNMT1-221ENST00000589538 MSH5O43196 834 aa21.73■■□□□ 1.07
DNMT1-221ENST00000589538 SSFA2P28290 1259 aa21.73■■□□□ 1.07
DNMT1-221ENST00000589538 NFE2L2Q16236 605 aa21.73■■□□□ 1.07
DNMT1-221ENST00000589538 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
DNMT1-221ENST00000589538 ANP32CO43423 234 aa21.72■■□□□ 1.07
DNMT1-221ENST00000589538 ATF5Q9Y2D1 282 aaPredicted RBP21.72■■□□□ 1.07
DNMT1-221ENST00000589538 CNTNAP4Q9C0A0 1308 aa21.72■■□□□ 1.07
DNMT1-221ENST00000589538 DLG5Q8TDM6 1919 aa21.71■■□□□ 1.07
DNMT1-221ENST00000589538 SLC39A6Q13433 755 aa21.71■■□□□ 1.07
DNMT1-221ENST00000589538 COL23A1Q86Y22 540 aaPredicted RBP21.71■■□□□ 1.07
DNMT1-221ENST00000589538 VSIG10Q8N0Z9 540 aa21.71■■□□□ 1.07
DNMT1-221ENST00000589538 UBR2Q8IWV8 1755 aa21.71■■□□□ 1.07
DNMT1-221ENST00000589538 GNPATO15228 680 aa21.7■■□□□ 1.06
DNMT1-221ENST00000589538 KCPQ6ZWJ8 1503 aa21.7■■□□□ 1.06
DNMT1-221ENST00000589538 PTGER2P43116 358 aa21.69■■□□□ 1.06
DNMT1-221ENST00000589538 ZNF790Q6PG37 636 aa21.69■■□□□ 1.06
DNMT1-221ENST00000589538 MCM10Q7L590 875 aa21.69■■□□□ 1.06
DNMT1-221ENST00000589538 RTCBQ9Y3I0 505 aaKnown RBP21.69■■□□□ 1.06
DNMT1-221ENST00000589538 TJP1Q07157 1748 aa21.69■■□□□ 1.06
DNMT1-221ENST00000589538 COL24A1Q17RW2 1714 aa21.69■■□□□ 1.06
DNMT1-221ENST00000589538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.68■■□□□ 1.06
DNMT1-221ENST00000589538 BTBD11A6QL63 1104 aa21.68■■□□□ 1.06
DNMT1-221ENST00000589538 ADRA2BP18089 450 aa21.68■■□□□ 1.06
DNMT1-221ENST00000589538 POLD1P28340 1107 aa21.68■■□□□ 1.06
DNMT1-221ENST00000589538 LMOD3Q0VAK6 560 aa21.67■■□□□ 1.06
DNMT1-221ENST00000589538 RUNDC1Q96C34 613 aa21.67■■□□□ 1.06
DNMT1-221ENST00000589538 SGIP1Q9BQI5 828 aa21.67■■□□□ 1.06
DNMT1-221ENST00000589538 RPS6KA4O75676 772 aa21.66■■□□□ 1.06
DNMT1-221ENST00000589538 PHF14O94880 888 aa21.66■■□□□ 1.06
DNMT1-221ENST00000589538 TEX13AQ9BXU3 409 aaPredicted RBP21.66■■□□□ 1.06
DNMT1-221ENST00000589538 ADAMTS8Q9UP79 889 aa21.66■■□□□ 1.06
DNMT1-221ENST00000589538 CRKLP46109 303 aaKnown RBP21.65■■□□□ 1.06
DNMT1-221ENST00000589538 TAF7Q15545 349 aaPredicted RBP21.65■■□□□ 1.06
DNMT1-221ENST00000589538 TRAPPC3LQ5T215 181 aa21.65■■□□□ 1.06
DNMT1-221ENST00000589538 PNISRQ8TF01 805 aaKnown RBP21.65■■□□□ 1.06
DNMT1-221ENST00000589538 FMNL2Q96PY5 1086 aa21.65■■□□□ 1.06
DNMT1-221ENST00000589538 DCTN1Q14203 1278 aa21.64■■□□□ 1.05
DNMT1-221ENST00000589538 DNAJC10Q8IXB1 793 aa21.64■■□□□ 1.05
DNMT1-221ENST00000589538 ARXQ96QS3 562 aa21.64■■□□□ 1.05
DNMT1-221ENST00000589538 HEG1Q9ULI3 1381 aa21.63■■□□□ 1.05
DNMT1-221ENST00000589538 MYH14Q7Z406 1995 aaKnown RBP21.63■■□□□ 1.05
DNMT1-221ENST00000589538 STARD3NLO95772 234 aa21.63■■□□□ 1.05
DNMT1-221ENST00000589538 TMPOP42166 694 aaKnown RBP21.63■■□□□ 1.05
DNMT1-221ENST00000589538 RIPK4P57078 832 aa21.63■■□□□ 1.05
DNMT1-221ENST00000589538 AMIGO3Q86WK7 504 aa21.63■■□□□ 1.05
DNMT1-221ENST00000589538 ZNF496Q96IT1 587 aaPredicted RBP21.63■■□□□ 1.05
DNMT1-221ENST00000589538 CCDC87Q9NVE4 849 aa21.63■■□□□ 1.05
DNMT1-221ENST00000589538 CYP19A1P11511 503 aaPredicted RBP21.62■■□□□ 1.05
DNMT1-221ENST00000589538 CCDC146Q8IYE0 955 aa21.61■■□□□ 1.05
DNMT1-221ENST00000589538 RFC4P35249 363 aa21.6■■□□□ 1.05
DNMT1-221ENST00000589538 INTS5Q6P9B9 1019 aaKnown RBP21.59■■□□□ 1.05
DNMT1-221ENST00000589538 ARHGEF1Q92888 912 aaKnown RBP21.58■■□□□ 1.05
DNMT1-221ENST00000589538 MSL1Q68DK7 614 aa21.57■■□□□ 1.04
DNMT1-221ENST00000589538 SMIM5Q71RC9 77 aa21.57■■□□□ 1.04
DNMT1-221ENST00000589538 MRS2Q9HD23 443 aa21.57■■□□□ 1.04
DNMT1-221ENST00000589538 BABAM1Q9NWV8 329 aa21.57■■□□□ 1.04
DNMT1-221ENST00000589538 C4AP0C0L4 1744 aa21.56■■□□□ 1.04
DNMT1-221ENST00000589538 KCNQ3O43525 872 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms