RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 AXIN2Q9Y2T1 843 aa13.04□□□□□ -0.32
VPS25-203ENST00000589520 CAMTA1Q9Y6Y1 1673 aa13.03□□□□□ -0.32
VPS25-203ENST00000589520 BTBD11A6QL63 1104 aa13.03□□□□□ -0.32
VPS25-203ENST00000589520 EIF4A1P60842 406 aaKnown RBP13.03□□□□□ -0.32
VPS25-203ENST00000589520 ZC3H6P61129 1189 aaKnown RBP13.03□□□□□ -0.32
VPS25-203ENST00000589520 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
VPS25-203ENST00000589520 HMMRO75330 724 aa13.02□□□□□ -0.33
VPS25-203ENST00000589520 CHD1LQ86WJ1 897 aa13.02□□□□□ -0.33
VPS25-203ENST00000589520 ANKRD44Q8N8A2 993 aa13.02□□□□□ -0.33
VPS25-203ENST00000589520 UPF2Q9HAU5 1272 aaKnown RBP13.02□□□□□ -0.33
VPS25-203ENST00000589520 GNAI3P08754 354 aa13.01□□□□□ -0.33
VPS25-203ENST00000589520 CSB-PGBD3P0DP91 1061 aa13.01□□□□□ -0.33
VPS25-203ENST00000589520 FLIIQ13045 1269 aa13.01□□□□□ -0.33
VPS25-203ENST00000589520 HDGFL1Q5TGJ6 251 aa13.01□□□□□ -0.33
VPS25-203ENST00000589520 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
VPS25-203ENST00000589520 DCTPP1Q9H773 170 aa13.01□□□□□ -0.33
VPS25-203ENST00000589520 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
VPS25-203ENST00000589520 NLRP2Q9NX02 1062 aa13.01□□□□□ -0.33
VPS25-203ENST00000589520 NOP58Q9Y2X3 529 aaKnown RBP13.01□□□□□ -0.33
VPS25-203ENST00000589520 RGS12O14924 1447 aa13.01□□□□□ -0.33
VPS25-203ENST00000589520 LMO7Q8WWI1 1683 aa13□□□□□ -0.33
VPS25-203ENST00000589520 MSH5O43196 834 aa13□□□□□ -0.33
VPS25-203ENST00000589520 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
VPS25-203ENST00000589520 HDAC5Q9UQL6 1122 aa13□□□□□ -0.33
VPS25-203ENST00000589520 MPRIPQ6WCQ1 1025 aa12.99□□□□□ -0.33
VPS25-203ENST00000589520 PXDNLA1KZ92 1463 aa12.98□□□□□ -0.33
VPS25-203ENST00000589520 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
VPS25-203ENST00000589520 GNAI2P04899 355 aa12.98□□□□□ -0.33
VPS25-203ENST00000589520 FKBP5Q13451 457 aaPredicted RBP12.98□□□□□ -0.33
VPS25-203ENST00000589520 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
VPS25-203ENST00000589520 DBF4Q9UBU7 674 aaPredicted RBP12.98□□□□□ -0.33
VPS25-203ENST00000589520 FAM208AQ9UK61 1670 aaKnown RBP12.98□□□□□ -0.33
VPS25-203ENST00000589520 HEG1Q9ULI3 1381 aa12.97□□□□□ -0.33
VPS25-203ENST00000589520 MYT1Q01538 1121 aa12.97□□□□□ -0.33
VPS25-203ENST00000589520 ANKRD45Q5TZF3 282 aa12.97□□□□□ -0.33
VPS25-203ENST00000589520 G2E3Q7L622 706 aa12.97□□□□□ -0.33
VPS25-203ENST00000589520 NPM2Q86SE8 214 aaKnown RBP12.97□□□□□ -0.33
VPS25-203ENST00000589520 SIRT2Q8IXJ6 389 aa12.97□□□□□ -0.33
VPS25-203ENST00000589520 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
VPS25-203ENST00000589520 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
VPS25-203ENST00000589520 PHKG2P15735 406 aa12.96□□□□□ -0.33
VPS25-203ENST00000589520 BMP2KLQ5H9B9 411 aa12.96□□□□□ -0.33
VPS25-203ENST00000589520 CEP85Q6P2H3 762 aa12.96□□□□□ -0.33
VPS25-203ENST00000589520 SLC52A2Q9HAB3 445 aa12.96□□□□□ -0.33
VPS25-203ENST00000589520 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.33
VPS25-203ENST00000589520 COL18A1P39060 1754 aa12.96□□□□□ -0.34
VPS25-203ENST00000589520 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
VPS25-203ENST00000589520 GIGYF1O75420 1035 aaPredicted RBP12.95□□□□□ -0.34
VPS25-203ENST00000589520 SLC4A10Q6U841 1118 aa12.95□□□□□ -0.34
VPS25-203ENST00000589520 PRDM11Q9NQV5 511 aa12.95□□□□□ -0.34
VPS25-203ENST00000589520 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
VPS25-203ENST00000589520 XIRP1Q702N8 1843 aaKnown RBP12.95□□□□□ -0.34
VPS25-203ENST00000589520 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
VPS25-203ENST00000589520 CABLES1Q8TDN4 633 aa12.94□□□□□ -0.34
VPS25-203ENST00000589520 MEIS3Q99687 375 aa12.94□□□□□ -0.34
VPS25-203ENST00000589520 C1orf115Q9H7X2 142 aa12.94□□□□□ -0.34
VPS25-203ENST00000589520 IBTKQ9P2D0 1353 aaPredicted RBP12.94□□□□□ -0.34
VPS25-203ENST00000589520 ADAMTS7Q9UKP4 1686 aa12.93□□□□□ -0.34
VPS25-203ENST00000589520 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
VPS25-203ENST00000589520 EIF2S2P20042 333 aaKnown RBP12.93□□□□□ -0.34
VPS25-203ENST00000589520 ATP8B2P98198 1209 aa12.93□□□□□ -0.34
VPS25-203ENST00000589520 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
VPS25-203ENST00000589520 LNPKQ9C0E8 428 aa12.93□□□□□ -0.34
VPS25-203ENST00000589520 SRCIN1Q9C0H9 1055 aa12.93□□□□□ -0.34
VPS25-203ENST00000589520 KDM3BQ7LBC6 1761 aa12.92□□□□□ -0.34
VPS25-203ENST00000589520 F6X3S4 739 aa12.92□□□□□ -0.34
VPS25-203ENST00000589520 ALDH1L1O75891 902 aa12.92□□□□□ -0.34
VPS25-203ENST00000589520 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
VPS25-203ENST00000589520 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
VPS25-203ENST00000589520 DNAAF4Q8WXU2 420 aa12.92□□□□□ -0.34
VPS25-203ENST00000589520 ATP10DQ9P241 1426 aa12.92□□□□□ -0.34
VPS25-203ENST00000589520 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
VPS25-203ENST00000589520 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
VPS25-203ENST00000589520 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
VPS25-203ENST00000589520 BECN1Q14457 450 aa12.91□□□□□ -0.34
VPS25-203ENST00000589520 KSR2Q6VAB6 950 aa12.91□□□□□ -0.34
VPS25-203ENST00000589520 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
VPS25-203ENST00000589520 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
VPS25-203ENST00000589520 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
VPS25-203ENST00000589520 DDX21Q9NR30 783 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS25-203ENST00000589520 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
VPS25-203ENST00000589520 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
VPS25-203ENST00000589520 KCNQ3O43525 872 aa12.9□□□□□ -0.34
VPS25-203ENST00000589520 UBTFL1P0CB47 393 aaPredicted RBP12.9□□□□□ -0.34
VPS25-203ENST00000589520 EVA1CP58658 441 aa12.9□□□□□ -0.34
VPS25-203ENST00000589520 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
VPS25-203ENST00000589520 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
VPS25-203ENST00000589520 CHPF2Q9P2E5 772 aa12.9□□□□□ -0.34
VPS25-203ENST00000589520 RAB11FIP3O75154 756 aa12.89□□□□□ -0.35
VPS25-203ENST00000589520 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
VPS25-203ENST00000589520 IL2RBP14784 551 aa12.89□□□□□ -0.35
VPS25-203ENST00000589520 CABP4P57796 275 aa12.89□□□□□ -0.35
VPS25-203ENST00000589520 HSP90AB4PQ58FF6 505 aa12.89□□□□□ -0.35
VPS25-203ENST00000589520 BEND3Q5T5X7 828 aa12.89□□□□□ -0.35
VPS25-203ENST00000589520 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
VPS25-203ENST00000589520 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
VPS25-203ENST00000589520 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
VPS25-203ENST00000589520 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
VPS25-203ENST00000589520 ERBB4Q15303 1308 aa12.88□□□□□ -0.35
VPS25-203ENST00000589520 MEGF6O75095 1541 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms