RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 MCM10Q7L590 875 aa29.57■■■□□ 2.32
R3HDM4-205ENST00000589445 APAF1O14727 1248 aa29.56■■■□□ 2.32
R3HDM4-205ENST00000589445 RIPK4P57078 832 aa29.56■■■□□ 2.32
R3HDM4-205ENST00000589445 DCTN1Q14203 1278 aa29.56■■■□□ 2.32
R3HDM4-205ENST00000589445 TEFQ10587 303 aa29.55■■■□□ 2.32
R3HDM4-205ENST00000589445 NUP188Q5SRE5 1749 aa29.54■■■□□ 2.32
R3HDM4-205ENST00000589445 LMOD3Q0VAK6 560 aa29.54■■■□□ 2.32
R3HDM4-205ENST00000589445 PIGBQ92521 554 aa29.54■■■□□ 2.32
R3HDM4-205ENST00000589445 CEMIPQ8WUJ3 1361 aa29.53■■■□□ 2.32
R3HDM4-205ENST00000589445 IL17REQ8NFR9 667 aa29.53■■■□□ 2.32
R3HDM4-205ENST00000589445 SLC52A2Q9HAB3 445 aa29.53■■■□□ 2.32
R3HDM4-205ENST00000589445 HTATSF1O43719 755 aaKnown RBP29.51■■■□□ 2.31
R3HDM4-205ENST00000589445 EN1Q05925 392 aaPredicted RBP29.51■■■□□ 2.31
R3HDM4-205ENST00000589445 NFATC2IPQ8NCF5 419 aa29.51■■■□□ 2.31
R3HDM4-205ENST00000589445 THUMPD2Q9BTF0 503 aaKnown RBP29.51■■■□□ 2.31
R3HDM4-205ENST00000589445 UBR2Q8IWV8 1755 aa29.51■■■□□ 2.31
R3HDM4-205ENST00000589445 PALLDQ8WX93 1383 aa29.51■■■□□ 2.31
R3HDM4-205ENST00000589445 KDM3BQ7LBC6 1761 aa29.49■■■□□ 2.31
R3HDM4-205ENST00000589445 C5P01031 1676 aa29.48■■■□□ 2.31
R3HDM4-205ENST00000589445 EZH2Q15910 746 aaKnown RBP29.46■■■□□ 2.31
R3HDM4-205ENST00000589445 ASAP1Q9ULH1 1129 aa29.46■■■□□ 2.31
R3HDM4-205ENST00000589445 SALL2Q9Y467 1007 aaPredicted RBP29.45■■■□□ 2.31
R3HDM4-205ENST00000589445 TAF1LQ8IZX4 1826 aa29.45■■■□□ 2.3
R3HDM4-205ENST00000589445 SMARCC1Q92922 1105 aaPredicted RBP29.44■■■□□ 2.3
R3HDM4-205ENST00000589445 ATG3Q9NT62 314 aa29.43■■■□□ 2.3
R3HDM4-205ENST00000589445 TRIM35Q9UPQ4 493 aa29.43■■■□□ 2.3
R3HDM4-205ENST00000589445 KCPQ6ZWJ8 1503 aa29.43■■■□□ 2.3
R3HDM4-205ENST00000589445 TJP1Q07157 1748 aa29.42■■■□□ 2.3
R3HDM4-205ENST00000589445 PLSCR1O15162 318 aa29.42■■■□□ 2.3
R3HDM4-205ENST00000589445 SLC39A6Q13433 755 aa29.41■■■□□ 2.3
R3HDM4-205ENST00000589445 CAMKK2Q96RR4 588 aa29.41■■■□□ 2.3
R3HDM4-205ENST00000589445 BTBD11A6QL63 1104 aa29.4■■■□□ 2.3
R3HDM4-205ENST00000589445 TXNRD1Q16881 649 aa29.4■■■□□ 2.3
R3HDM4-205ENST00000589445 TTC5Q8N0Z6 440 aa29.4■■■□□ 2.3
R3HDM4-205ENST00000589445 ZNF831Q5JPB2 1677 aa29.4■■■□□ 2.3
R3HDM4-205ENST00000589445 COL5A3P25940 1745 aaPredicted RBP29.4■■■□□ 2.3
R3HDM4-205ENST00000589445 RBM42Q9BTD8 480 aaKnown RBP29.39■■■□□ 2.3
R3HDM4-205ENST00000589445 CCNL1Q9UK58 526 aaPredicted RBP29.39■■■□□ 2.3
R3HDM4-205ENST00000589445 CICQ96RK0 1608 aaPredicted RBP29.38■■■□□ 2.29
R3HDM4-205ENST00000589445 PTCD1O75127 700 aaKnown RBP29.37■■■□□ 2.29
R3HDM4-205ENST00000589445 KCNQ4P56696 695 aa29.37■■■□□ 2.29
R3HDM4-205ENST00000589445 R3HDM1Q15032 1099 aaKnown RBP29.37■■■□□ 2.29
R3HDM4-205ENST00000589445 LAS1LQ9Y4W2 734 aaKnown RBP29.37■■■□□ 2.29
R3HDM4-205ENST00000589445 LAMB4A4D0S4 1761 aa29.36■■■□□ 2.29
R3HDM4-205ENST00000589445 TAF7Q15545 349 aaPredicted RBP29.35■■■□□ 2.29
R3HDM4-205ENST00000589445 MIS18AQ9NYP9 233 aa29.35■■■□□ 2.29
R3HDM4-205ENST00000589445 C4BP0C0L5 1744 aa29.34■■■□□ 2.29
R3HDM4-205ENST00000589445 LOC102724428A0A0B4J2F2 783 aa29.34■■■□□ 2.29
R3HDM4-205ENST00000589445 SIK1P57059 783 aa29.34■■■□□ 2.29
R3HDM4-205ENST00000589445 TUBGCP6Q96RT7 1819 aa29.34■■■□□ 2.29
R3HDM4-205ENST00000589445 CALD1Q05682 793 aaKnown RBP29.33■■■□□ 2.29
R3HDM4-205ENST00000589445 SLC27A3Q5K4L6 730 aa29.33■■■□□ 2.29
R3HDM4-205ENST00000589445 ZNF790Q6PG37 636 aa29.33■■■□□ 2.29
R3HDM4-205ENST00000589445 TSPYL4Q9UJ04 414 aa29.33■■■□□ 2.29
R3HDM4-205ENST00000589445 KCNQ3O43525 872 aa29.31■■■□□ 2.28
R3HDM4-205ENST00000589445 YY1P25490 414 aa29.31■■■□□ 2.28
R3HDM4-205ENST00000589445 CCDC27Q2M243 656 aa29.31■■■□□ 2.28
R3HDM4-205ENST00000589445 WWC1Q8IX03 1113 aa29.31■■■□□ 2.28
R3HDM4-205ENST00000589445 PROM2Q8N271 834 aa29.31■■■□□ 2.28
R3HDM4-205ENST00000589445 LRRC4BQ9NT99 713 aa29.31■■■□□ 2.28
R3HDM4-205ENST00000589445 ATP6V1AP38606 617 aa29.3■■■□□ 2.28
R3HDM4-205ENST00000589445 NGEFQ8N5V2 710 aa29.27■■■□□ 2.28
R3HDM4-205ENST00000589445 ZNF496Q96IT1 587 aaPredicted RBP29.27■■■□□ 2.28
R3HDM4-205ENST00000589445 FMNL2Q96PY5 1086 aa29.27■■■□□ 2.28
R3HDM4-205ENST00000589445 HEG1Q9ULI3 1381 aa29.26■■■□□ 2.28
R3HDM4-205ENST00000589445 ITPK1Q13572 414 aa29.26■■■□□ 2.27
R3HDM4-205ENST00000589445 SLC4A9Q96Q91 983 aa29.26■■■□□ 2.27
R3HDM4-205ENST00000589445 HNRNPUQ00839 825 aaKnown RBP eCLIP29.25■■■□□ 2.27
R3HDM4-205ENST00000589445 NCBP3Q53F19 620 aaKnown RBP29.25■■■□□ 2.27
R3HDM4-205ENST00000589445 GNAI1P63096 354 aa29.24■■■□□ 2.27
R3HDM4-205ENST00000589445 QSER1Q2KHR3 1735 aa29.24■■■□□ 2.27
R3HDM4-205ENST00000589445 UBR3Q6ZT12 1888 aa29.24■■■□□ 2.27
R3HDM4-205ENST00000589445 ANO8Q9HCE9 1232 aaPredicted RBP29.24■■■□□ 2.27
R3HDM4-205ENST00000589445 IFT57Q9NWB7 429 aa29.24■■■□□ 2.27
R3HDM4-205ENST00000589445 LINC00116Q8NCU8 138 aa29.23■■■□□ 2.27
R3HDM4-205ENST00000589445 CFAP44Q96MT7 982 aa29.23■■■□□ 2.27
R3HDM4-205ENST00000589445 DNAJC10Q8IXB1 793 aa29.22■■■□□ 2.27
R3HDM4-205ENST00000589445 STK32BQ9NY57 414 aa29.22■■■□□ 2.27
R3HDM4-205ENST00000589445 NBPF14Q5TI25 921 aa29.21■■■□□ 2.27
R3HDM4-205ENST00000589445 MBIPQ9NS73 344 aa29.21■■■□□ 2.27
R3HDM4-205ENST00000589445 BABAM1Q9NWV8 329 aa29.21■■■□□ 2.27
R3HDM4-205ENST00000589445 MYH14Q7Z406 1995 aaKnown RBP29.21■■■□□ 2.27
R3HDM4-205ENST00000589445 CHL1O00533 1208 aa29.2■■■□□ 2.26
R3HDM4-205ENST00000589445 ZNF827Q17R98 1081 aa29.2■■■□□ 2.26
R3HDM4-205ENST00000589445 AK7Q96M32 723 aa29.2■■■□□ 2.26
R3HDM4-205ENST00000589445 VSIG10Q8N0Z9 540 aa29.19■■■□□ 2.26
R3HDM4-205ENST00000589445 TSR2Q969E8 191 aaKnown RBP29.19■■■□□ 2.26
R3HDM4-205ENST00000589445 IL16Q14005 1332 aa29.19■■■□□ 2.26
R3HDM4-205ENST00000589445 EIF4A1P60842 406 aaKnown RBP29.18■■■□□ 2.26
R3HDM4-205ENST00000589445 WDR63Q8IWG1 891 aa29.18■■■□□ 2.26
R3HDM4-205ENST00000589445 ZNF521Q96K83 1311 aa29.17■■■□□ 2.26
R3HDM4-205ENST00000589445 C4AP0C0L4 1744 aa29.17■■■□□ 2.26
R3HDM4-205ENST00000589445 ZNF853P0CG23 659 aa29.16■■■□□ 2.26
R3HDM4-205ENST00000589445 PRAMEF22A3QJZ6 481 aa29.15■■■□□ 2.26
R3HDM4-205ENST00000589445 SNRPA1P09661 255 aaKnown RBP29.15■■■□□ 2.26
R3HDM4-205ENST00000589445 HMGB2P26583 209 aaKnown RBP29.15■■■□□ 2.26
R3HDM4-205ENST00000589445 CNTNAP4Q9C0A0 1308 aa29.15■■■□□ 2.26
R3HDM4-205ENST00000589445 FANCIQ9NVI1 1328 aa29.15■■■□□ 2.26
R3HDM4-205ENST00000589445 GNPATO15228 680 aa29.14■■■□□ 2.26
R3HDM4-205ENST00000589445 CRKLP46109 303 aaKnown RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms