RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-222	ENST00000589235	MSL1	Q68DK7	614 aa		28.79	■■■□□ 2.2
CIRBP-222	ENST00000589235	LINC00116	Q8NCU8	138 aa		28.78	■■■□□ 2.2
CIRBP-222	ENST00000589235	C4B	P0C0L5	1744 aa		28.77	■■■□□ 2.2
CIRBP-222	ENST00000589235	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.77	■■■□□ 2.2
CIRBP-222	ENST00000589235	DIAPH1	O60610	1272 aa	Known RBP	28.77	■■■□□ 2.2
CIRBP-222	ENST00000589235	RBM42	Q9BTD8	480 aa	Known RBP	28.77	■■■□□ 2.2
CIRBP-222	ENST00000589235	NPC1L1	Q9UHC9	1359 aa		28.76	■■■□□ 2.2
CIRBP-222	ENST00000589235	COL24A1	Q17RW2	1714 aa		28.76	■■■□□ 2.19
CIRBP-222	ENST00000589235	GNPAT	O15228	680 aa		28.75	■■■□□ 2.19
CIRBP-222	ENST00000589235	ITPK1	Q13572	414 aa		28.75	■■■□□ 2.19
CIRBP-222	ENST00000589235	TAF1L	Q8IZX4	1826 aa		28.74	■■■□□ 2.19
CIRBP-222	ENST00000589235	AKAP4	Q5JQC9	854 aa		28.74	■■■□□ 2.19
CIRBP-222	ENST00000589235	PELP1	Q8IZL8	1130 aa	Known RBP	28.72	■■■□□ 2.19
CIRBP-222	ENST00000589235	KDM6A	O15550	1401 aa	Predicted RBP	28.71	■■■□□ 2.19
CIRBP-222	ENST00000589235	CNGB1	Q14028	1251 aa	Predicted RBP	28.71	■■■□□ 2.19
CIRBP-222	ENST00000589235	NFATC2IP	Q8NCF5	419 aa		28.71	■■■□□ 2.19
CIRBP-222	ENST00000589235	RTCB	Q9Y3I0	505 aa	Known RBP	28.71	■■■□□ 2.19
CIRBP-222	ENST00000589235	CD2AP	Q9Y5K6	639 aa		28.71	■■■□□ 2.19
CIRBP-222	ENST00000589235	HMOX1	P09601	288 aa		28.7	■■■□□ 2.18
CIRBP-222	ENST00000589235	TRAPPC3L	Q5T215	181 aa		28.69	■■■□□ 2.18
CIRBP-222	ENST00000589235	RC3H1	Q5TC82	1133 aa	Known RBP	28.69	■■■□□ 2.18
CIRBP-222	ENST00000589235	NLGN2	Q8NFZ4	835 aa		28.69	■■■□□ 2.18
CIRBP-222	ENST00000589235	AMIGO3	Q86WK7	504 aa		28.68	■■■□□ 2.18
CIRBP-222	ENST00000589235	GRIN3B	O60391	1043 aa		28.66	■■■□□ 2.18
CIRBP-222	ENST00000589235	ADRA2B	P18089	450 aa		28.66	■■■□□ 2.18
CIRBP-222	ENST00000589235	PTCD1	O75127	700 aa	Known RBP	28.65	■■■□□ 2.18
CIRBP-222	ENST00000589235	SMIM5	Q71RC9	77 aa		28.65	■■■□□ 2.18
CIRBP-222	ENST00000589235	CNTNAP4	Q9C0A0	1308 aa		28.65	■■■□□ 2.18
CIRBP-222	ENST00000589235	CFAP53	Q96M91	514 aa		28.64	■■■□□ 2.18
CIRBP-222	ENST00000589235	SLC4A9	Q96Q91	983 aa		28.64	■■■□□ 2.18
CIRBP-222	ENST00000589235	U2SURP	O15042	1029 aa	Known RBP	28.63	■■■□□ 2.17
CIRBP-222	ENST00000589235	SLC52A2	Q9HAB3	445 aa		28.63	■■■□□ 2.17
CIRBP-222	ENST00000589235	UBR3	Q6ZT12	1888 aa		28.62	■■■□□ 2.17
CIRBP-222	ENST00000589235	RPS6KA4	O75676	772 aa		28.62	■■■□□ 2.17
CIRBP-222	ENST00000589235	ZNF831	Q5JPB2	1677 aa		28.61	■■■□□ 2.17
CIRBP-222	ENST00000589235	RNMT	O43148	476 aa	Known RBP	28.61	■■■□□ 2.17
CIRBP-222	ENST00000589235	MTHFSD	Q2M296	383 aa	Known RBP	28.61	■■■□□ 2.17
CIRBP-222	ENST00000589235	NLGN1	Q8N2Q7	840 aa		28.61	■■■□□ 2.17
CIRBP-222	ENST00000589235	RFC4	P35249	363 aa		28.6	■■■□□ 2.17
CIRBP-222	ENST00000589235	LGR6	Q9HBX8	967 aa		28.59	■■■□□ 2.17
CIRBP-222	ENST00000589235	ARHGEF1	Q92888	912 aa	Known RBP	28.58	■■■□□ 2.17
CIRBP-222	ENST00000589235	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.57	■■■□□ 2.16
CIRBP-222	ENST00000589235	NUDC	Q9Y266	331 aa		28.57	■■■□□ 2.16
CIRBP-222	ENST00000589235	GAS2L2	Q8NHY3	880 aa		28.56	■■■□□ 2.16
CIRBP-222	ENST00000589235	MMP10	P09238	476 aa		28.55	■■■□□ 2.16
CIRBP-222	ENST00000589235	CRKL	P46109	303 aa	Known RBP	28.55	■■■□□ 2.16
CIRBP-222	ENST00000589235	YBX3	P16989	372 aa	Known RBP eCLIP	28.53	■■■□□ 2.16
CIRBP-222	ENST00000589235	SCN11A	Q9UI33	1791 aa		28.52	■■■□□ 2.16
CIRBP-222	ENST00000589235	COL3A1	P02461	1466 aa	Predicted RBP	28.52	■■■□□ 2.16
CIRBP-222	ENST00000589235	GNAT3	A8MTJ3	354 aa		28.51	■■■□□ 2.15
CIRBP-222	ENST00000589235	GYS1	P13807	737 aa		28.5	■■■□□ 2.15
CIRBP-222	ENST00000589235	TTC5	Q8N0Z6	440 aa		28.5	■■■□□ 2.15
CIRBP-222	ENST00000589235	PARP3	Q9Y6F1	533 aa		28.5	■■■□□ 2.15
CIRBP-222	ENST00000589235	CHD4	Q14839	1912 aa		28.49	■■■□□ 2.15
CIRBP-222	ENST00000589235	TEF	Q10587	303 aa		28.49	■■■□□ 2.15
CIRBP-222	ENST00000589235	SLC39A6	Q13433	755 aa		28.49	■■■□□ 2.15
CIRBP-222	ENST00000589235	MRC1	P22897	1456 aa		28.48	■■■□□ 2.15
CIRBP-222	ENST00000589235	DNAJC10	Q8IXB1	793 aa		28.48	■■■□□ 2.15
CIRBP-222	ENST00000589235	VSIG10	Q8N0Z9	540 aa		28.48	■■■□□ 2.15
CIRBP-222	ENST00000589235	CCDC87	Q9NVE4	849 aa		28.48	■■■□□ 2.15
CIRBP-222	ENST00000589235	COL5A3	P25940	1745 aa	Predicted RBP	28.48	■■■□□ 2.15
CIRBP-222	ENST00000589235	PPP2R1A	P30153	589 aa		28.47	■■■□□ 2.15
CIRBP-222	ENST00000589235	TGFB2	P61812	414 aa		28.46	■■■□□ 2.15
CIRBP-222	ENST00000589235	INTS5	Q6P9B9	1019 aa	Known RBP	28.46	■■■□□ 2.15
CIRBP-222	ENST00000589235	PRKAR2B	P31323	418 aa		28.45	■■■□□ 2.14
CIRBP-222	ENST00000589235	ZPR1	O75312	459 aa		28.44	■■■□□ 2.14
CIRBP-222	ENST00000589235	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.44	■■■□□ 2.14
CIRBP-222	ENST00000589235	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.44	■■■□□ 2.14	7e-7	■■■■□ 23.3
CIRBP-222	ENST00000589235	CYP19A1	P11511	503 aa	Predicted RBP	28.43	■■■□□ 2.14
CIRBP-222	ENST00000589235	USP42	Q9H9J4	1324 aa	Known RBP	28.43	■■■□□ 2.14
CIRBP-222	ENST00000589235	RSPH6A	Q9H0K4	717 aa		28.42	■■■□□ 2.14
CIRBP-222	ENST00000589235	CIC	Q96RK0	1608 aa	Predicted RBP	28.41	■■■□□ 2.14
CIRBP-222	ENST00000589235	FCHSD2	O94868	740 aa		28.41	■■■□□ 2.14
CIRBP-222	ENST00000589235	STARD3NL	O95772	234 aa		28.41	■■■□□ 2.14
CIRBP-222	ENST00000589235	IL17RE	Q8NFR9	667 aa		28.41	■■■□□ 2.14
CIRBP-222	ENST00000589235	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.4	■■■□□ 2.14
CIRBP-222	ENST00000589235	SRP68	Q9UHB9	627 aa	Known RBP	28.4	■■■□□ 2.14
CIRBP-222	ENST00000589235	ADAMTS7	Q9UKP4	1686 aa		28.39	■■■□□ 2.14
CIRBP-222	ENST00000589235	TJP1	Q07157	1748 aa		28.39	■■■□□ 2.14
CIRBP-222	ENST00000589235	UTRN	P46939	3433 aa		28.38	■■■□□ 2.13
CIRBP-222	ENST00000589235	FKBP8	Q14318	412 aa		28.38	■■■□□ 2.13
CIRBP-222	ENST00000589235	ZNF790	Q6PG37	636 aa		28.38	■■■□□ 2.13
CIRBP-222	ENST00000589235	RTF1	Q92541	710 aa	Known RBP	28.38	■■■□□ 2.13
CIRBP-222	ENST00000589235	PHACTR3	Q96KR7	559 aa		28.38	■■■□□ 2.13
CIRBP-222	ENST00000589235	SOS1	Q07889	1333 aa	Predicted RBP	28.38	■■■□□ 2.13
CIRBP-222	ENST00000589235	NEFM	P07197	916 aa		28.37	■■■□□ 2.13
CIRBP-222	ENST00000589235	WWC3	Q9ULE0	1092 aa		28.37	■■■□□ 2.13
CIRBP-222	ENST00000589235	KCP	Q6ZWJ8	1503 aa		28.37	■■■□□ 2.13
CIRBP-222	ENST00000589235	MYH14	Q7Z406	1995 aa	Known RBP	28.37	■■■□□ 2.13
CIRBP-222	ENST00000589235	USPL1	Q5W0Q7	1092 aa		28.36	■■■□□ 2.13
CIRBP-222	ENST00000589235	C10orf71	Q711Q0	1435 aa		28.35	■■■□□ 2.13
CIRBP-222	ENST00000589235	NARF	Q9UHQ1	456 aa		28.35	■■■□□ 2.13
CIRBP-222	ENST00000589235		A0A087WZG4	1122 aa		28.34	■■■□□ 2.13
CIRBP-222	ENST00000589235		A0A0G2JLW4	131 aa		28.34	■■■□□ 2.13
CIRBP-222	ENST00000589235	BTBD11	A6QL63	1104 aa		28.34	■■■□□ 2.13
CIRBP-222	ENST00000589235	FMNL2	Q96PY5	1086 aa		28.34	■■■□□ 2.13
CIRBP-222	ENST00000589235	ZBTB1	Q9Y2K1	713 aa		28.34	■■■□□ 2.13
CIRBP-222	ENST00000589235	C4A	P0C0L4	1744 aa		28.33	■■■□□ 2.13
CIRBP-222	ENST00000589235	CANX	P27824	592 aa	Known RBP	28.33	■■■□□ 2.13
CIRBP-222	ENST00000589235	NPM2	Q86SE8	214 aa	Known RBP	28.33	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms