RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 QSER1Q2KHR3 1735 aa13.69□□□□□ -0.22
APOC1-203ENST00000588802 TUBGCP6Q96RT7 1819 aa13.69□□□□□ -0.22
APOC1-203ENST00000588802 TOGARAM1Q9Y4F4 1720 aa13.68□□□□□ -0.22
APOC1-203ENST00000588802 LOC102724428A0A0B4J2F2 783 aa13.67□□□□□ -0.22
APOC1-203ENST00000588802 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
APOC1-203ENST00000588802 SIK1P57059 783 aa13.67□□□□□ -0.22
APOC1-203ENST00000588802 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
APOC1-203ENST00000588802 LINC00116Q8NCU8 138 aa13.67□□□□□ -0.22
APOC1-203ENST00000588802 PKD1L3Q7Z443 1732 aa13.67□□□□□ -0.22
APOC1-203ENST00000588802 ITPK1Q13572 414 aa13.66□□□□□ -0.22
APOC1-203ENST00000588802 PLEKHO1Q53GL0 409 aaPredicted RBP13.66□□□□□ -0.22
APOC1-203ENST00000588802 ZNF530Q6P9A1 599 aaPredicted RBP13.66□□□□□ -0.22
APOC1-203ENST00000588802 ATG3Q9NT62 314 aa13.66□□□□□ -0.22
APOC1-203ENST00000588802 WWC3Q9ULE0 1092 aa13.66□□□□□ -0.22
APOC1-203ENST00000588802 IGSF1Q8N6C5 1336 aa13.65□□□□□ -0.22
APOC1-203ENST00000588802 ITGB4P16144 1822 aa13.65□□□□□ -0.22
APOC1-203ENST00000588802 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
APOC1-203ENST00000588802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
APOC1-203ENST00000588802 ZNF784Q8NCA9 323 aaPredicted RBP13.65□□□□□ -0.22
APOC1-203ENST00000588802 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
APOC1-203ENST00000588802 C5P01031 1676 aa13.65□□□□□ -0.22
APOC1-203ENST00000588802 GNPATO15228 680 aa13.64□□□□□ -0.23
APOC1-203ENST00000588802 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
APOC1-203ENST00000588802 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
APOC1-203ENST00000588802 HSP90AB1P08238 724 aaKnown RBP13.63□□□□□ -0.23
APOC1-203ENST00000588802 CABP4P57796 275 aa13.63□□□□□ -0.23
APOC1-203ENST00000588802 COL24A1Q17RW2 1714 aa13.63□□□□□ -0.23
APOC1-203ENST00000588802 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
APOC1-203ENST00000588802 C4BP0C0L5 1744 aa13.62□□□□□ -0.23
APOC1-203ENST00000588802 YBX3P16989 372 aaKnown RBP eCLIP13.62□□□□□ -0.23
APOC1-203ENST00000588802 UTRNP46939 3433 aa13.62□□□□□ -0.23
APOC1-203ENST00000588802 HMOX1P09601 288 aa13.61□□□□□ -0.23
APOC1-203ENST00000588802 MTHFSP49914 203 aa13.61□□□□□ -0.23
APOC1-203ENST00000588802 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
APOC1-203ENST00000588802 AMOTQ4VCS5 1084 aa13.61□□□□□ -0.23
APOC1-203ENST00000588802 C1orf141Q5JVX7 400 aa13.61□□□□□ -0.23
APOC1-203ENST00000588802 DCAF5Q96JK2 942 aa13.61□□□□□ -0.23
APOC1-203ENST00000588802 SLC4A9Q96Q91 983 aa13.61□□□□□ -0.23
APOC1-203ENST00000588802 CD2APQ9Y5K6 639 aa13.61□□□□□ -0.23
APOC1-203ENST00000588802 TAF1LQ8IZX4 1826 aa13.6□□□□□ -0.23
APOC1-203ENST00000588802 ERVV-2B6SEH9 535 aa13.6□□□□□ -0.23
APOC1-203ENST00000588802 GRIN3BO60391 1043 aa13.6□□□□□ -0.23
APOC1-203ENST00000588802 PTCD1O75127 700 aaKnown RBP13.6□□□□□ -0.23
APOC1-203ENST00000588802 SSFA2P28290 1259 aa13.6□□□□□ -0.23
APOC1-203ENST00000588802 IL13P35225 146 aa13.6□□□□□ -0.23
APOC1-203ENST00000588802 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
APOC1-203ENST00000588802 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
APOC1-203ENST00000588802 ADAMTS8Q9UP79 889 aa13.58□□□□□ -0.24
APOC1-203ENST00000588802 RTCBQ9Y3I0 505 aaKnown RBP13.58□□□□□ -0.24
APOC1-203ENST00000588802 CHD4Q14839 1912 aa13.57□□□□□ -0.24
APOC1-203ENST00000588802 TRAPPC3LQ5T215 181 aa13.57□□□□□ -0.24
APOC1-203ENST00000588802 MMP10P09238 476 aa13.56□□□□□ -0.24
APOC1-203ENST00000588802 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
APOC1-203ENST00000588802 KDRP35968 1356 aa13.56□□□□□ -0.24
APOC1-203ENST00000588802 UBR3Q6ZT12 1888 aa13.55□□□□□ -0.24
APOC1-203ENST00000588802 ARHGEF1Q92888 912 aaKnown RBP13.55□□□□□ -0.24
APOC1-203ENST00000588802 CFAP53Q96M91 514 aa13.55□□□□□ -0.24
APOC1-203ENST00000588802 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
APOC1-203ENST00000588802 DIAPH1O60610 1272 aaKnown RBP13.54□□□□□ -0.24
APOC1-203ENST00000588802 ADRA2BP18089 450 aa13.54□□□□□ -0.24
APOC1-203ENST00000588802 RFC4P35249 363 aa13.54□□□□□ -0.24
APOC1-203ENST00000588802 RC3H1Q5TC82 1133 aaKnown RBP13.54□□□□□ -0.24
APOC1-203ENST00000588802 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
APOC1-203ENST00000588802 SALL2Q9Y467 1007 aaPredicted RBP13.54□□□□□ -0.24
APOC1-203ENST00000588802 U2SURPO15042 1029 aaKnown RBP13.53□□□□□ -0.24
APOC1-203ENST00000588802 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
APOC1-203ENST00000588802 SLC39A6Q13433 755 aa13.53□□□□□ -0.24
APOC1-203ENST00000588802 AKAP4Q5JQC9 854 aa13.53□□□□□ -0.24
APOC1-203ENST00000588802 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
APOC1-203ENST00000588802 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.25
APOC1-203ENST00000588802 MTHFSDQ2M296 383 aaKnown RBP13.52□□□□□ -0.25
APOC1-203ENST00000588802 ZNF526Q8TF50 670 aaPredicted RBP13.52□□□□□ -0.25
APOC1-203ENST00000588802 SRP68Q9UHB9 627 aaKnown RBP13.52□□□□□ -0.25
APOC1-203ENST00000588802 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
APOC1-203ENST00000588802 DNAJC10Q8IXB1 793 aa13.51□□□□□ -0.25
APOC1-203ENST00000588802 NLGN1Q8N2Q7 840 aa13.51□□□□□ -0.25
APOC1-203ENST00000588802 SLC52A2Q9HAB3 445 aa13.51□□□□□ -0.25
APOC1-203ENST00000588802 A0A0G2JLW4 131 aa13.5□□□□□ -0.25
APOC1-203ENST00000588802 GIGYF1O75420 1035 aaPredicted RBP13.5□□□□□ -0.25
APOC1-203ENST00000588802 GYS1P13807 737 aa13.5□□□□□ -0.25
APOC1-203ENST00000588802 C1QTNF8P60827 252 aa13.5□□□□□ -0.25
APOC1-203ENST00000588802 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
APOC1-203ENST00000588802 BCS1LQ9Y276 419 aa13.49□□□□□ -0.25
APOC1-203ENST00000588802 PARP3Q9Y6F1 533 aa13.49□□□□□ -0.25
APOC1-203ENST00000588802 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
APOC1-203ENST00000588802 FKBP8Q14318 412 aa13.48□□□□□ -0.25
APOC1-203ENST00000588802 CCDC87Q9NVE4 849 aa13.48□□□□□ -0.25
APOC1-203ENST00000588802 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
APOC1-203ENST00000588802 CICQ96RK0 1608 aaPredicted RBP13.47□□□□□ -0.25
APOC1-203ENST00000588802 DPEP1P16444 411 aa13.47□□□□□ -0.25
APOC1-203ENST00000588802 TGFB2P61812 414 aa13.47□□□□□ -0.25
APOC1-203ENST00000588802 INTS5Q6P9B9 1019 aaKnown RBP13.47□□□□□ -0.25
APOC1-203ENST00000588802 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
APOC1-203ENST00000588802 APAF1O14727 1248 aa13.46□□□□□ -0.25
APOC1-203ENST00000588802 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
APOC1-203ENST00000588802 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
APOC1-203ENST00000588802 PXDNLA1KZ92 1463 aa13.45□□□□□ -0.26
APOC1-203ENST00000588802 FCHSD2O94868 740 aa13.45□□□□□ -0.26
APOC1-203ENST00000588802 DDR1Q08345 913 aa13.45□□□□□ -0.26
APOC1-203ENST00000588802 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms