RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 LGR6Q9HBX8 967 aa21.82■■□□□ 1.08
ERCC2-211ENST00000588652 FKBP5Q13451 457 aaPredicted RBP21.81■■□□□ 1.08
ERCC2-211ENST00000588652 PLEKHM2Q8IWE5 1019 aa21.8■■□□□ 1.08
ERCC2-211ENST00000588652 HSCBQ8IWL3 235 aa21.8■■□□□ 1.08
ERCC2-211ENST00000588652 KDM3BQ7LBC6 1761 aa21.8■■□□□ 1.08
ERCC2-211ENST00000588652 MST1RQ04912 1400 aa21.8■■□□□ 1.08
ERCC2-211ENST00000588652 NCOA3Q9Y6Q9 1424 aa21.8■■□□□ 1.08
ERCC2-211ENST00000588652 PLEKHO1Q53GL0 409 aaPredicted RBP21.79■■□□□ 1.08
ERCC2-211ENST00000588652 AKAP4Q5JQC9 854 aa21.79■■□□□ 1.08
ERCC2-211ENST00000588652 ANKRD24Q8TF21 1146 aa21.79■■□□□ 1.08
ERCC2-211ENST00000588652 CHMP5Q9NZZ3 219 aa21.79■■□□□ 1.08
ERCC2-211ENST00000588652 ZNF530Q6P9A1 599 aaPredicted RBP21.79■■□□□ 1.08
ERCC2-211ENST00000588652 DNAJC5Q9H3Z4 198 aa21.79■■□□□ 1.08
ERCC2-211ENST00000588652 ALS2Q96Q42 1657 aa21.79■■□□□ 1.08
ERCC2-211ENST00000588652 AXIN2Q9Y2T1 843 aa21.78■■□□□ 1.08
ERCC2-211ENST00000588652 STRCP1A6NGW2 1772 aa21.78■■□□□ 1.08
ERCC2-211ENST00000588652 N4BP2Q86UW6 1770 aaPredicted RBP21.78■■□□□ 1.08
ERCC2-211ENST00000588652 CAMTA1Q9Y6Y1 1673 aa21.78■■□□□ 1.08
ERCC2-211ENST00000588652 AMOTQ4VCS5 1084 aa21.78■■□□□ 1.08
ERCC2-211ENST00000588652 HDGFL1Q5TGJ6 251 aa21.78■■□□□ 1.08
ERCC2-211ENST00000588652 RGPD5Q99666 1765 aa21.77■■□□□ 1.08
ERCC2-211ENST00000588652 TMEM94Q12767 1356 aa21.77■■□□□ 1.08
ERCC2-211ENST00000588652 HMMRO75330 724 aa21.77■■□□□ 1.08
ERCC2-211ENST00000588652 EIF4A1P60842 406 aaKnown RBP21.77■■□□□ 1.08
ERCC2-211ENST00000588652 GSPT1P15170 499 aaKnown RBP21.76■■□□□ 1.07
ERCC2-211ENST00000588652 TBC1D9Q6ZT07 1266 aa21.76■■□□□ 1.07
ERCC2-211ENST00000588652 C16orf71Q8IYS4 520 aaPredicted RBP21.76■■□□□ 1.07
ERCC2-211ENST00000588652 SNX21Q969T3 373 aa21.76■■□□□ 1.07
ERCC2-211ENST00000588652 GNAI2P04899 355 aa21.76■■□□□ 1.07
ERCC2-211ENST00000588652 ATF3P18847 181 aa21.76■■□□□ 1.07
ERCC2-211ENST00000588652 MCM4P33991 863 aa21.76■■□□□ 1.07
ERCC2-211ENST00000588652 PXDNQ92626 1479 aa21.76■■□□□ 1.07
ERCC2-211ENST00000588652 PXDNLA1KZ92 1463 aa21.75■■□□□ 1.07
ERCC2-211ENST00000588652 TEFQ10587 303 aa21.75■■□□□ 1.07
ERCC2-211ENST00000588652 MPRIPQ6WCQ1 1025 aa21.75■■□□□ 1.07
ERCC2-211ENST00000588652 DCCP43146 1447 aa21.74■■□□□ 1.07
ERCC2-211ENST00000588652 GNAI3P08754 354 aa21.74■■□□□ 1.07
ERCC2-211ENST00000588652 HOXB7P09629 217 aa21.74■■□□□ 1.07
ERCC2-211ENST00000588652 TTC22Q5TAA0 569 aa21.74■■□□□ 1.07
ERCC2-211ENST00000588652 PHAXQ9H814 394 aaKnown RBP21.73■■□□□ 1.07
ERCC2-211ENST00000588652 SMARCA5O60264 1052 aaPredicted RBP21.72■■□□□ 1.07
ERCC2-211ENST00000588652 DDIT3P35638 169 aa21.72■■□□□ 1.07
ERCC2-211ENST00000588652 C1orf141Q5JVX7 400 aa21.72■■□□□ 1.07
ERCC2-211ENST00000588652 OTUD7AQ8TE49 926 aaPredicted RBP21.72■■□□□ 1.07
ERCC2-211ENST00000588652 KIF2CQ99661 725 aa21.72■■□□□ 1.07
ERCC2-211ENST00000588652 BTBD11A6QL63 1104 aa21.72■■□□□ 1.07
ERCC2-211ENST00000588652 APBB1O00213 710 aa21.72■■□□□ 1.07
ERCC2-211ENST00000588652 RNMTO43148 476 aaKnown RBP21.72■■□□□ 1.07
ERCC2-211ENST00000588652 KCNQ3O43525 872 aa21.72■■□□□ 1.07
ERCC2-211ENST00000588652 CDC45O75419 566 aa21.72■■□□□ 1.07
ERCC2-211ENST00000588652 ERBB3P21860 1342 aa21.72■■□□□ 1.07
ERCC2-211ENST00000588652 ZC3H6P61129 1189 aaKnown RBP21.71■■□□□ 1.07
ERCC2-211ENST00000588652 OVOS2A0A0G2JMS6 1433 aa21.71■■□□□ 1.07
ERCC2-211ENST00000588652 EIF2S2P20042 333 aaKnown RBP21.71■■□□□ 1.07
ERCC2-211ENST00000588652 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
ERCC2-211ENST00000588652 CHMP4AQ9BY43 222 aa21.69■■□□□ 1.06
ERCC2-211ENST00000588652 USP44Q9H0E7 712 aa21.69■■□□□ 1.06
ERCC2-211ENST00000588652 CHPF2Q9P2E5 772 aa21.68■■□□□ 1.06
ERCC2-211ENST00000588652 EIF5BO60841 1220 aaKnown RBP21.67■■□□□ 1.06
ERCC2-211ENST00000588652 ATP8B2P98198 1209 aa21.67■■□□□ 1.06
ERCC2-211ENST00000588652 PNMA6EA0A0J9YXQ4 647 aa21.67■■□□□ 1.06
ERCC2-211ENST00000588652 CADPS2Q86UW7 1296 aa21.67■■□□□ 1.06
ERCC2-211ENST00000588652 SIPA1L3O60292 1781 aaPredicted RBP21.67■■□□□ 1.06
ERCC2-211ENST00000588652 EXOC6BQ9Y2D4 811 aa21.66■■□□□ 1.06
ERCC2-211ENST00000588652 LRRFIP2Q9Y608 721 aaKnown RBP21.66■■□□□ 1.06
ERCC2-211ENST00000588652 L1TD1Q5T7N2 865 aaKnown RBP21.66■■□□□ 1.06
ERCC2-211ENST00000588652 LMTK3Q96Q04 1460 aa21.66■■□□□ 1.06
ERCC2-211ENST00000588652 ADAMTS7Q9UKP4 1686 aa21.66■■□□□ 1.06
ERCC2-211ENST00000588652 NPHP3Q7Z494 1330 aa21.65■■□□□ 1.06
ERCC2-211ENST00000588652 HSP90AB1P08238 724 aaKnown RBP21.65■■□□□ 1.06
ERCC2-211ENST00000588652 CD2BP2O95400 341 aaKnown RBP21.64■■□□□ 1.05
ERCC2-211ENST00000588652 UBTFL1P0CB47 393 aaPredicted RBP21.64■■□□□ 1.05
ERCC2-211ENST00000588652 SDSP20132 328 aa21.64■■□□□ 1.05
ERCC2-211ENST00000588652 HSPA2P54652 639 aa21.64■■□□□ 1.05
ERCC2-211ENST00000588652 SRCIN1Q9C0H9 1055 aa21.64■■□□□ 1.05
ERCC2-211ENST00000588652 OSBPL3Q9H4L5 887 aa21.64■■□□□ 1.05
ERCC2-211ENST00000588652 COL18A1P39060 1754 aa21.64■■□□□ 1.05
ERCC2-211ENST00000588652 CRYBG1Q9Y4K1 1723 aa21.64■■□□□ 1.05
ERCC2-211ENST00000588652 HEG1Q9ULI3 1381 aa21.63■■□□□ 1.05
ERCC2-211ENST00000588652 CIZ1Q9ULV3 898 aaPredicted RBP21.63■■□□□ 1.05
ERCC2-211ENST00000588652 TRAK2O60296 914 aa21.63■■□□□ 1.05
ERCC2-211ENST00000588652 TNS3Q68CZ2 1445 aa21.62■■□□□ 1.05
ERCC2-211ENST00000588652 PI4KAP2A4QPH2 592 aa21.62■■□□□ 1.05
ERCC2-211ENST00000588652 GIGYF1O75420 1035 aaPredicted RBP21.62■■□□□ 1.05
ERCC2-211ENST00000588652 PI4KAP1Q8N8J0 262 aa21.62■■□□□ 1.05
ERCC2-211ENST00000588652 NLRP2Q9NX02 1062 aa21.62■■□□□ 1.05
ERCC2-211ENST00000588652 IBTKQ9P2D0 1353 aaPredicted RBP21.62■■□□□ 1.05
ERCC2-211ENST00000588652 DDX11L8A8MPP1 907 aa21.61■■□□□ 1.05
ERCC2-211ENST00000588652 ANXA1P04083 346 aa21.61■■□□□ 1.05
ERCC2-211ENST00000588652 PDE1AP54750 535 aa21.61■■□□□ 1.05
ERCC2-211ENST00000588652 DNAAF4Q8WXU2 420 aa21.61■■□□□ 1.05
ERCC2-211ENST00000588652 RAPGEF4Q8WZA2 1011 aa21.61■■□□□ 1.05
ERCC2-211ENST00000588652 LRRCC1Q9C099 1032 aa21.61■■□□□ 1.05
ERCC2-211ENST00000588652 DBF4Q9UBU7 674 aaPredicted RBP21.61■■□□□ 1.05
ERCC2-211ENST00000588652 CABLES1Q8TDN4 633 aa21.61■■□□□ 1.05
ERCC2-211ENST00000588652 FSD2A1L4K1 749 aa21.6■■□□□ 1.05
ERCC2-211ENST00000588652 BEND3Q5T5X7 828 aa21.6■■□□□ 1.05
ERCC2-211ENST00000588652 RBM42Q9BTD8 480 aaKnown RBP21.6■■□□□ 1.05
ERCC2-211ENST00000588652 SALL3Q9BXA9 1300 aa21.6■■□□□ 1.05
ERCC2-211ENST00000588652 K7ELQ4 463 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms