RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
CCDC43-203ENST00000588210 C1orf141Q5JVX7 400 aa18.77■□□□□ 0.6
CCDC43-203ENST00000588210 PNNQ9H307 717 aaKnown RBP18.77■□□□□ 0.6
CCDC43-203ENST00000588210 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.59
CCDC43-203ENST00000588210 KCNQ2O43526 872 aa18.77■□□□□ 0.59
CCDC43-203ENST00000588210 NHSQ6T4R5 1651 aa18.77■□□□□ 0.59
CCDC43-203ENST00000588210 APBA3O96018 575 aa18.76■□□□□ 0.59
CCDC43-203ENST00000588210 BAG6P46379 1132 aa18.76■□□□□ 0.59
CCDC43-203ENST00000588210 MTHFSDQ2M296 383 aaKnown RBP18.76■□□□□ 0.59
CCDC43-203ENST00000588210 AKAP4Q5JQC9 854 aa18.75■□□□□ 0.59
CCDC43-203ENST00000588210 SKAP1Q86WV1 359 aa18.75■□□□□ 0.59
CCDC43-203ENST00000588210 DDRGK1Q96HY6 314 aa18.75■□□□□ 0.59
CCDC43-203ENST00000588210 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
CCDC43-203ENST00000588210 GAS2L2Q8NHY3 880 aa18.75■□□□□ 0.59
CCDC43-203ENST00000588210 DCAF5Q96JK2 942 aa18.75■□□□□ 0.59
CCDC43-203ENST00000588210 KAT6BQ8WYB5 2073 aa18.75■□□□□ 0.59
CCDC43-203ENST00000588210 DOT1LQ8TEK3 1739 aa18.74■□□□□ 0.59
CCDC43-203ENST00000588210 NEFMP07197 916 aa18.74■□□□□ 0.59
CCDC43-203ENST00000588210 PRIM1P49642 420 aaKnown RBP18.74■□□□□ 0.59
CCDC43-203ENST00000588210 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
CCDC43-203ENST00000588210 PHACTR3Q96KR7 559 aa18.74■□□□□ 0.59
CCDC43-203ENST00000588210 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
CCDC43-203ENST00000588210 DEFB132Q7Z7B7 95 aa18.73■□□□□ 0.59
CCDC43-203ENST00000588210 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
CCDC43-203ENST00000588210 PLSCR1O15162 318 aa18.72■□□□□ 0.59
CCDC43-203ENST00000588210 ERVV-2B6SEH9 535 aa18.7■□□□□ 0.58
CCDC43-203ENST00000588210 EN1Q05925 392 aaPredicted RBP18.7■□□□□ 0.58
CCDC43-203ENST00000588210 TOGARAM1Q9Y4F4 1720 aa18.7■□□□□ 0.58
CCDC43-203ENST00000588210 KDM6AO15550 1401 aaPredicted RBP18.7■□□□□ 0.58
CCDC43-203ENST00000588210 FAM161AQ3B820 660 aa18.7■□□□□ 0.58
CCDC43-203ENST00000588210 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
CCDC43-203ENST00000588210 CAMKK2Q96RR4 588 aa18.69■□□□□ 0.58
CCDC43-203ENST00000588210 BTAF1O14981 1849 aa18.69■□□□□ 0.58
CCDC43-203ENST00000588210 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
CCDC43-203ENST00000588210 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
CCDC43-203ENST00000588210 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
CCDC43-203ENST00000588210 ITGB4P16144 1822 aa18.68■□□□□ 0.58
CCDC43-203ENST00000588210 BCAR3O75815 825 aa18.68■□□□□ 0.58
CCDC43-203ENST00000588210 TMOD3Q9NYL9 352 aa18.68■□□□□ 0.58
CCDC43-203ENST00000588210 RGPD3A6NKT7 1758 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-203ENST00000588210 RGPD4Q7Z3J3 1758 aa18.67■□□□□ 0.58
CCDC43-203ENST00000588210 PDE3AQ14432 1141 aa18.67■□□□□ 0.58
CCDC43-203ENST00000588210 WWC1Q8IX03 1113 aa18.67■□□□□ 0.58
CCDC43-203ENST00000588210 RNMTO43148 476 aaKnown RBP18.67■□□□□ 0.58
CCDC43-203ENST00000588210 EZH2Q15910 746 aaKnown RBP18.67■□□□□ 0.58
CCDC43-203ENST00000588210 C8orf34Q49A92 452 aa18.67■□□□□ 0.58
CCDC43-203ENST00000588210 SCN11AQ9UI33 1791 aa18.66■□□□□ 0.58
CCDC43-203ENST00000588210 CABP4P57796 275 aa18.66■□□□□ 0.58
CCDC43-203ENST00000588210 PIGBQ92521 554 aa18.66■□□□□ 0.58
CCDC43-203ENST00000588210 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
CCDC43-203ENST00000588210 RUNDC1Q96C34 613 aa18.65■□□□□ 0.58
CCDC43-203ENST00000588210 ADAMTS7Q9UKP4 1686 aa18.65■□□□□ 0.58
CCDC43-203ENST00000588210 HTATSF1O43719 755 aaKnown RBP18.64■□□□□ 0.57
CCDC43-203ENST00000588210 NFE2L2Q16236 605 aa18.64■□□□□ 0.57
CCDC43-203ENST00000588210 RTF1Q92541 710 aaKnown RBP18.64■□□□□ 0.57
CCDC43-203ENST00000588210 LAS1LQ9Y4W2 734 aaKnown RBP18.64■□□□□ 0.57
CCDC43-203ENST00000588210 NFATC2IPQ8NCF5 419 aa18.63■□□□□ 0.57
CCDC43-203ENST00000588210 IL17REQ8NFR9 667 aa18.63■□□□□ 0.57
CCDC43-203ENST00000588210 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
CCDC43-203ENST00000588210 SLC52A2Q9HAB3 445 aa18.63■□□□□ 0.57
CCDC43-203ENST00000588210 TXNRD1Q16881 649 aa18.62■□□□□ 0.57
CCDC43-203ENST00000588210 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
CCDC43-203ENST00000588210 PROM2Q8N271 834 aa18.62■□□□□ 0.57
CCDC43-203ENST00000588210 MRC1P22897 1456 aa18.62■□□□□ 0.57
CCDC43-203ENST00000588210 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
CCDC43-203ENST00000588210 RREB1Q92766 1687 aa18.61■□□□□ 0.57
CCDC43-203ENST00000588210 TMPOP42166 694 aaKnown RBP18.6■□□□□ 0.57
CCDC43-203ENST00000588210 CCDC27Q2M243 656 aa18.6■□□□□ 0.57
CCDC43-203ENST00000588210 SLC27A3Q5K4L6 730 aa18.6■□□□□ 0.57
CCDC43-203ENST00000588210 WDR63Q8IWG1 891 aa18.6■□□□□ 0.57
CCDC43-203ENST00000588210 PALLDQ8WX93 1383 aa18.6■□□□□ 0.57
CCDC43-203ENST00000588210 TEFQ10587 303 aa18.59■□□□□ 0.57
CCDC43-203ENST00000588210 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
CCDC43-203ENST00000588210 ASAP1Q9ULH1 1129 aa18.59■□□□□ 0.57
CCDC43-203ENST00000588210 DLG5Q8TDM6 1919 aa18.59■□□□□ 0.57
CCDC43-203ENST00000588210 LY75O60449 1722 aa18.59■□□□□ 0.57
CCDC43-203ENST00000588210 RIPK4P57078 832 aa18.59■□□□□ 0.57
CCDC43-203ENST00000588210 CLUAP1Q96AJ1 413 aa18.59■□□□□ 0.57
CCDC43-203ENST00000588210 RGS3P49796 1198 aa18.58■□□□□ 0.57
CCDC43-203ENST00000588210 AAMPQ13685 434 aa18.58■□□□□ 0.57
CCDC43-203ENST00000588210 MCM10Q7L590 875 aa18.58■□□□□ 0.57
CCDC43-203ENST00000588210 LMOD3Q0VAK6 560 aa18.58■□□□□ 0.56
CCDC43-203ENST00000588210 CANXP27824 592 aaKnown RBP18.57■□□□□ 0.56
CCDC43-203ENST00000588210 NUP188Q5SRE5 1749 aa18.57■□□□□ 0.56
CCDC43-203ENST00000588210 IGHDP01880 384 aa18.56■□□□□ 0.56
CCDC43-203ENST00000588210 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
CCDC43-203ENST00000588210 DCTN1Q14203 1278 aa18.56■□□□□ 0.56
CCDC43-203ENST00000588210 CCNL1Q9UK58 526 aaPredicted RBP18.56■□□□□ 0.56
CCDC43-203ENST00000588210 RARSP54136 660 aaKnown RBP18.56■□□□□ 0.56
CCDC43-203ENST00000588210 LRRC4BQ9NT99 713 aa18.56■□□□□ 0.56
CCDC43-203ENST00000588210 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
CCDC43-203ENST00000588210 NBPF14Q5TI25 921 aa18.55■□□□□ 0.56
CCDC43-203ENST00000588210 RRP7AQ9Y3A4 280 aaKnown RBP18.55■□□□□ 0.56
CCDC43-203ENST00000588210 PANK1Q8TE04 598 aa18.54■□□□□ 0.56
CCDC43-203ENST00000588210 LOC102724428A0A0B4J2F2 783 aa18.54■□□□□ 0.56
CCDC43-203ENST00000588210 SIK1P57059 783 aa18.54■□□□□ 0.56
CCDC43-203ENST00000588210 COG6Q9Y2V7 657 aa18.54■□□□□ 0.56
CCDC43-203ENST00000588210 SIPA1L3O60292 1781 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-203ENST00000588210 BTBD11A6QL63 1104 aa18.52■□□□□ 0.56
CCDC43-203ENST00000588210 SLC39A6Q13433 755 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms