RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 DDX54Q8TDD1 881 aaKnown RBP28.46■■■□□ 2.15
RBM42-203ENST00000588161 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.46■■■□□ 2.15
RBM42-203ENST00000588161 MRC1P22897 1456 aa28.44■■■□□ 2.14
RBM42-203ENST00000588161 ELL2O00472 640 aaPredicted RBP28.44■■■□□ 2.14
RBM42-203ENST00000588161 PLIN1O60240 522 aa28.44■■■□□ 2.14
RBM42-203ENST00000588161 SOS1Q07889 1333 aaPredicted RBP28.44■■■□□ 2.14
RBM42-203ENST00000588161 SIPA1L3O60292 1781 aaPredicted RBP28.44■■■□□ 2.14
RBM42-203ENST00000588161 SSH1Q8WYL5 1049 aa28.43■■■□□ 2.14
RBM42-203ENST00000588161 SMC4Q9NTJ3 1288 aa28.43■■■□□ 2.14
RBM42-203ENST00000588161 KDM3BQ7LBC6 1761 aa28.42■■■□□ 2.14
RBM42-203ENST00000588161 ERVV-2B6SEH9 535 aa28.42■■■□□ 2.14
RBM42-203ENST00000588161 KRT24Q2M2I5 525 aa28.42■■■□□ 2.14
RBM42-203ENST00000588161 TNS2Q63HR2 1409 aa28.42■■■□□ 2.14
RBM42-203ENST00000588161 BRPF1P55201 1214 aaPredicted RBP28.41■■■□□ 2.14
RBM42-203ENST00000588161 BCL2L13Q9BXK5 485 aa28.41■■■□□ 2.14
RBM42-203ENST00000588161 NFATC2IPQ8NCF5 419 aa28.4■■■□□ 2.14
RBM42-203ENST00000588161 AFF2P51816 1311 aa28.4■■■□□ 2.14
RBM42-203ENST00000588161 CABP4P57796 275 aa28.4■■■□□ 2.14
RBM42-203ENST00000588161 EIF4A1P60842 406 aaKnown RBP28.39■■■□□ 2.13
RBM42-203ENST00000588161 DDB1Q16531 1140 aa28.39■■■□□ 2.13
RBM42-203ENST00000588161 CANXP27824 592 aaKnown RBP28.36■■■□□ 2.13
RBM42-203ENST00000588161 KIF16BQ96L93 1317 aa28.36■■■□□ 2.13
RBM42-203ENST00000588161 HOXB7P09629 217 aa28.36■■■□□ 2.13
RBM42-203ENST00000588161 FRAT1Q92837 279 aaPredicted RBP28.36■■■□□ 2.13
RBM42-203ENST00000588161 KCNQ3O43525 872 aa28.35■■■□□ 2.13
RBM42-203ENST00000588161 PDE3AQ14432 1141 aa28.35■■■□□ 2.13
RBM42-203ENST00000588161 MRPL50Q8N5N7 158 aaKnown RBP28.35■■■□□ 2.13
RBM42-203ENST00000588161 ZNF790Q6PG37 636 aa28.34■■■□□ 2.13
RBM42-203ENST00000588161 FAM98CQ17RN3 349 aaKnown RBP28.33■■■□□ 2.13
RBM42-203ENST00000588161 ZKSCAN2Q63HK3 967 aa28.33■■■□□ 2.13
RBM42-203ENST00000588161 FBXO41Q8TF61 875 aa28.33■■■□□ 2.13
RBM42-203ENST00000588161 CHMP4AQ9BY43 222 aa28.33■■■□□ 2.13
RBM42-203ENST00000588161 TRPC5Q9UL62 973 aaPredicted RBP28.32■■■□□ 2.12
RBM42-203ENST00000588161 HEG1Q9ULI3 1381 aa28.32■■■□□ 2.12
RBM42-203ENST00000588161 ATRNO75882 1429 aa28.32■■■□□ 2.12
RBM42-203ENST00000588161 IPO8O15397 1037 aaKnown RBP28.32■■■□□ 2.12
RBM42-203ENST00000588161 C20orf194Q5TEA3 1177 aa28.32■■■□□ 2.12
RBM42-203ENST00000588161 GJD4Q96KN9 370 aaPredicted RBP28.31■■■□□ 2.12
RBM42-203ENST00000588161 MS4A1P11836 297 aa28.3■■■□□ 2.12
RBM42-203ENST00000588161 NOB1Q9ULX3 412 aaKnown RBP28.3■■■□□ 2.12
RBM42-203ENST00000588161 CCDC30Q5VVM6 783 aa28.29■■■□□ 2.12
RBM42-203ENST00000588161 SLC39A6Q13433 755 aa28.29■■■□□ 2.12
RBM42-203ENST00000588161 TTC5Q8N0Z6 440 aa28.29■■■□□ 2.12
RBM42-203ENST00000588161 ARHGAP45Q92619 1136 aa28.29■■■□□ 2.12
RBM42-203ENST00000588161 TOGARAM1Q9Y4F4 1720 aa28.28■■■□□ 2.12
RBM42-203ENST00000588161 TCERG1O14776 1098 aaKnown RBP28.27■■■□□ 2.12
RBM42-203ENST00000588161 GIGYF1O75420 1035 aaPredicted RBP28.27■■■□□ 2.12
RBM42-203ENST00000588161 ATF7IPQ6VMQ6 1270 aa28.27■■■□□ 2.12
RBM42-203ENST00000588161 TMOD3Q9NYL9 352 aa28.27■■■□□ 2.12
RBM42-203ENST00000588161 MARCH10Q8NA82 808 aaPredicted RBP28.26■■■□□ 2.11
RBM42-203ENST00000588161 CRBNQ96SW2 442 aa28.26■■■□□ 2.11
RBM42-203ENST00000588161 GLI3P10071 1580 aa28.26■■■□□ 2.11
RBM42-203ENST00000588161 EXOC6Q8TAG9 804 aa28.25■■■□□ 2.11
RBM42-203ENST00000588161 STK31Q9BXU1 1019 aa28.25■■■□□ 2.11
RBM42-203ENST00000588161 HDGFL1Q5TGJ6 251 aa28.25■■■□□ 2.11
RBM42-203ENST00000588161 THSD7AQ9UPZ6 1657 aa28.24■■■□□ 2.11
RBM42-203ENST00000588161 SLC4A2P04920 1241 aa28.24■■■□□ 2.11
RBM42-203ENST00000588161 TRIM27P14373 513 aa28.24■■■□□ 2.11
RBM42-203ENST00000588161 FMNL2Q96PY5 1086 aa28.24■■■□□ 2.11
RBM42-203ENST00000588161 QTRT2Q9H974 415 aaKnown RBP28.24■■■□□ 2.11
RBM42-203ENST00000588161 PPP4R2Q9NY27 417 aa28.24■■■□□ 2.11
RBM42-203ENST00000588161 ONECUT3O60422 494 aaPredicted RBP28.23■■■□□ 2.11
RBM42-203ENST00000588161 DZIP1LQ8IYY4 767 aaKnown RBP28.23■■■□□ 2.11
RBM42-203ENST00000588161 PANK1Q8TE04 598 aa28.22■■■□□ 2.11
RBM42-203ENST00000588161 ZNF496Q96IT1 587 aaPredicted RBP28.22■■■□□ 2.11
RBM42-203ENST00000588161 PIGBQ92521 554 aa28.21■■■□□ 2.11
RBM42-203ENST00000588161 PAPPAQ13219 1627 aa28.21■■■□□ 2.11
RBM42-203ENST00000588161 FTSJ3Q8IY81 847 aaKnown RBP28.21■■■□□ 2.11
RBM42-203ENST00000588161 BCL9O00512 1426 aa28.2■■■□□ 2.1
RBM42-203ENST00000588161 PTPRCP08575 1304 aa28.2■■■□□ 2.1
RBM42-203ENST00000588161 A0A0G2JS52 829 aa28.2■■■□□ 2.1
RBM42-203ENST00000588161 SNRPA1P09661 255 aaKnown RBP28.2■■■□□ 2.1
RBM42-203ENST00000588161 MYT1Q01538 1121 aa28.2■■■□□ 2.1
RBM42-203ENST00000588161 CLUAP1Q96AJ1 413 aa28.2■■■□□ 2.1
RBM42-203ENST00000588161 API5Q9BZZ5 524 aaKnown RBP28.2■■■□□ 2.1
RBM42-203ENST00000588161 TNNQ9UQP3 1299 aa28.2■■■□□ 2.1
RBM42-203ENST00000588161 ITGB4P16144 1822 aa28.19■■■□□ 2.1
RBM42-203ENST00000588161 RLBP1P12271 317 aa28.19■■■□□ 2.1
RBM42-203ENST00000588161 EIF2S2P20042 333 aaKnown RBP28.19■■■□□ 2.1
RBM42-203ENST00000588161 ZNF772Q68DY9 489 aaPredicted RBP28.18■■■□□ 2.1
RBM42-203ENST00000588161 NECTIN2Q92692 538 aa28.18■■■□□ 2.1
RBM42-203ENST00000588161 UBR2Q8IWV8 1755 aa28.17■■■□□ 2.1
RBM42-203ENST00000588161 CACNA1FO60840 1977 aa28.17■■■□□ 2.1
RBM42-203ENST00000588161 PRIM1P49642 420 aaKnown RBP28.17■■■□□ 2.1
RBM42-203ENST00000588161 COG6Q9Y2V7 657 aa28.17■■■□□ 2.1
RBM42-203ENST00000588161 DOT1LQ8TEK3 1739 aa28.16■■■□□ 2.1
RBM42-203ENST00000588161 KCPQ6ZWJ8 1503 aa28.16■■■□□ 2.1
RBM42-203ENST00000588161 PRAMEF22A3QJZ6 481 aa28.15■■■□□ 2.1
RBM42-203ENST00000588161 MVPQ14764 893 aaKnown RBP28.14■■■□□ 2.1
RBM42-203ENST00000588161 DBF4Q9UBU7 674 aaPredicted RBP28.14■■■□□ 2.1
RBM42-203ENST00000588161 SYTL4Q96C24 671 aaPredicted RBP28.14■■■□□ 2.09
RBM42-203ENST00000588161 ATG3Q9NT62 314 aa28.14■■■□□ 2.09
RBM42-203ENST00000588161 G2E3Q7L622 706 aa28.13■■■□□ 2.09
RBM42-203ENST00000588161 CHPF2Q9P2E5 772 aa28.13■■■□□ 2.09
RBM42-203ENST00000588161 ASAP1Q9ULH1 1129 aa28.13■■■□□ 2.09
RBM42-203ENST00000588161 ABCC4O15439 1325 aa28.12■■■□□ 2.09
RBM42-203ENST00000588161 FLIIQ13045 1269 aa28.12■■■□□ 2.09
RBM42-203ENST00000588161 AAMPQ13685 434 aa28.12■■■□□ 2.09
RBM42-203ENST00000588161 SEPT12Q8IYM1 358 aa28.12■■■□□ 2.09
RBM42-203ENST00000588161 C5P01031 1676 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms