RNA–Protein interactions for RNA: ENST00000588136.5

TCF3-212, Transcript of transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TCF3, Length 2,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-212ENST00000588136 SBNO1A3KN83 1393 aa20.55■□□□□ 0.88
TCF3-212ENST00000588136 GNAI2P04899 355 aa20.55■□□□□ 0.88
TCF3-212ENST00000588136 CASC1Q6TDU7 716 aa20.55■□□□□ 0.88
TCF3-212ENST00000588136 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
TCF3-212ENST00000588136 IL17REQ8NFR9 667 aa20.55■□□□□ 0.88
TCF3-212ENST00000588136 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
TCF3-212ENST00000588136 HMMRO75330 724 aa20.54■□□□□ 0.88
TCF3-212ENST00000588136 MAP4K4O95819 1239 aaPredicted RBP20.54■□□□□ 0.88
TCF3-212ENST00000588136 PALD1Q9ULE6 856 aa20.54■□□□□ 0.88
TCF3-212ENST00000588136 EID1Q9Y6B2 187 aa20.54■□□□□ 0.88
TCF3-212ENST00000588136 IGSF1Q8N6C5 1336 aa20.54■□□□□ 0.88
TCF3-212ENST00000588136 TRIM6-TRIM34B2RNG4 842 aa20.54■□□□□ 0.88
TCF3-212ENST00000588136 ERC2O15083 957 aa20.54■□□□□ 0.88
TCF3-212ENST00000588136 CCT4P50991 539 aaKnown RBP20.54■□□□□ 0.88
TCF3-212ENST00000588136 CAVIN1Q6NZI2 390 aaKnown RBP20.52■□□□□ 0.88
TCF3-212ENST00000588136 ZDHHC9Q9Y397 364 aa20.52■□□□□ 0.88
TCF3-212ENST00000588136 PIK3C2AO00443 1686 aa20.52■□□□□ 0.88
TCF3-212ENST00000588136 HOXC9P31274 260 aa20.52■□□□□ 0.88
TCF3-212ENST00000588136 NEK4P51957 841 aa20.52■□□□□ 0.88
TCF3-212ENST00000588136 IL25Q9H293 177 aa20.52■□□□□ 0.88
TCF3-212ENST00000588136 RBM27Q9P2N5 1060 aaKnown RBP20.52■□□□□ 0.88
TCF3-212ENST00000588136 KDRP35968 1356 aa20.52■□□□□ 0.87
TCF3-212ENST00000588136 GNAT3A8MTJ3 354 aa20.51■□□□□ 0.87
TCF3-212ENST00000588136 EIF2S2P20042 333 aaKnown RBP20.51■□□□□ 0.87
TCF3-212ENST00000588136 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
TCF3-212ENST00000588136 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
TCF3-212ENST00000588136 ABTB2Q8N961 1025 aa20.51■□□□□ 0.87
TCF3-212ENST00000588136 ANXA1P04083 346 aa20.51■□□□□ 0.87
TCF3-212ENST00000588136 KCNA6P17658 529 aa20.51■□□□□ 0.87
TCF3-212ENST00000588136 GOLGA6L22H0YM25 854 aa20.5■□□□□ 0.87
TCF3-212ENST00000588136 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
TCF3-212ENST00000588136 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
TCF3-212ENST00000588136 TTC21AQ8NDW8 1320 aa20.5■□□□□ 0.87
TCF3-212ENST00000588136 ST18O60284 1047 aa20.5■□□□□ 0.87
TCF3-212ENST00000588136 REC8O95072 547 aa20.5■□□□□ 0.87
TCF3-212ENST00000588136 DIP2AQ14689 1571 aa20.5■□□□□ 0.87
TCF3-212ENST00000588136 SKOR2Q2VWA4 1001 aaPredicted RBP20.5■□□□□ 0.87
TCF3-212ENST00000588136 PRPF40AO75400 957 aaKnown RBP20.5■□□□□ 0.87
TCF3-212ENST00000588136 MX1P20591 662 aa20.5■□□□□ 0.87
TCF3-212ENST00000588136 ANO2Q9NQ90 1003 aa20.5■□□□□ 0.87
TCF3-212ENST00000588136 DTNBO60941 627 aa20.49■□□□□ 0.87
TCF3-212ENST00000588136 CYP2E1P05181 493 aaPredicted RBP20.49■□□□□ 0.87
TCF3-212ENST00000588136 CCDC30Q5VVM6 783 aa20.49■□□□□ 0.87
TCF3-212ENST00000588136 UPF3BQ9BZI7 483 aaKnown RBP20.49■□□□□ 0.87
TCF3-212ENST00000588136 LMBRD1Q9NUN5 540 aa20.48■□□□□ 0.87
TCF3-212ENST00000588136 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
TCF3-212ENST00000588136 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
TCF3-212ENST00000588136 SALL3Q9BXA9 1300 aa20.47■□□□□ 0.87
TCF3-212ENST00000588136 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
TCF3-212ENST00000588136 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
TCF3-212ENST00000588136 KCNQ3O43525 872 aa20.47■□□□□ 0.87
TCF3-212ENST00000588136 LGR6Q9HBX8 967 aa20.46■□□□□ 0.87
TCF3-212ENST00000588136 TPRNQ4KMQ1 711 aa20.46■□□□□ 0.87
TCF3-212ENST00000588136 HDGFL1Q5TGJ6 251 aa20.46■□□□□ 0.87
TCF3-212ENST00000588136 TMX3Q96JJ7 454 aa20.46■□□□□ 0.87
TCF3-212ENST00000588136 OSBPL3Q9H4L5 887 aa20.46■□□□□ 0.87
TCF3-212ENST00000588136 ESPNB1AK53 854 aa20.45■□□□□ 0.86
TCF3-212ENST00000588136 ATP8B2P98198 1209 aa20.45■□□□□ 0.86
TCF3-212ENST00000588136 GPT2Q8TD30 523 aa20.45■□□□□ 0.86
TCF3-212ENST00000588136 LARP6Q9BRS8 491 aaKnown RBP20.45■□□□□ 0.86
TCF3-212ENST00000588136 FAM208AQ9UK61 1670 aaKnown RBP20.45■□□□□ 0.86
TCF3-212ENST00000588136 NASPP49321 788 aaPredicted RBP20.45■□□□□ 0.86
TCF3-212ENST00000588136 NUCB2P80303 420 aa20.45■□□□□ 0.86
TCF3-212ENST00000588136 TRIM44Q96DX7 344 aaPredicted RBP20.45■□□□□ 0.86
TCF3-212ENST00000588136 CHMLP26374 656 aa20.44■□□□□ 0.86
TCF3-212ENST00000588136 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
TCF3-212ENST00000588136 CLCN1P35523 988 aa20.44■□□□□ 0.86
TCF3-212ENST00000588136 ZSCAN23Q3MJ62 389 aa20.44■□□□□ 0.86
TCF3-212ENST00000588136 CLEC17AQ6ZS10 378 aa20.44■□□□□ 0.86
TCF3-212ENST00000588136 MAP3K5Q99683 1374 aa20.44■□□□□ 0.86
TCF3-212ENST00000588136 GNAI3P08754 354 aa20.43■□□□□ 0.86
TCF3-212ENST00000588136 UBTFL1P0CB47 393 aaPredicted RBP20.43■□□□□ 0.86
TCF3-212ENST00000588136 TAF7Q15545 349 aaPredicted RBP20.43■□□□□ 0.86
TCF3-212ENST00000588136 IBTKQ9P2D0 1353 aaPredicted RBP20.43■□□□□ 0.86
TCF3-212ENST00000588136 NBPF7P0C2Y1 421 aaPredicted RBP20.43■□□□□ 0.86
TCF3-212ENST00000588136 NWD1Q149M9 1564 aa20.43■□□□□ 0.86
TCF3-212ENST00000588136 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
TCF3-212ENST00000588136 VSIG10Q8N0Z9 540 aa20.42■□□□□ 0.86
TCF3-212ENST00000588136 TBX22Q9Y458 520 aa20.42■□□□□ 0.86
TCF3-212ENST00000588136 PPP1R42Q7Z4L9 355 aa20.42■□□□□ 0.86
TCF3-212ENST00000588136 LRRC59Q96AG4 307 aaKnown RBP20.42■□□□□ 0.86
TCF3-212ENST00000588136 SURF6O75683 361 aaKnown RBP20.41■□□□□ 0.86
TCF3-212ENST00000588136 XPCQ01831 940 aaPredicted RBP20.41■□□□□ 0.86
TCF3-212ENST00000588136 NBPF6Q5VWK0 638 aa20.4■□□□□ 0.86
TCF3-212ENST00000588136 NBPF4Q96M43 638 aa20.4■□□□□ 0.86
TCF3-212ENST00000588136 CHPF2Q9P2E5 772 aa20.4■□□□□ 0.86
TCF3-212ENST00000588136 PRIM1P49642 420 aaKnown RBP20.4■□□□□ 0.86
TCF3-212ENST00000588136 RBSNQ9H1K0 784 aa20.4■□□□□ 0.86
TCF3-212ENST00000588136 GDPD2Q9HCC8 539 aa20.4■□□□□ 0.86
TCF3-212ENST00000588136 HSP90AA2PQ14568 343 aaPredicted RBP20.4■□□□□ 0.86
TCF3-212ENST00000588136 MARF1Q9Y4F3 1742 aaKnown RBP20.39■□□□□ 0.86
TCF3-212ENST00000588136 TUBGCP6Q96RT7 1819 aa20.39■□□□□ 0.85
TCF3-212ENST00000588136 SOS1Q07889 1333 aaPredicted RBP20.39■□□□□ 0.85
TCF3-212ENST00000588136 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
TCF3-212ENST00000588136 LRRC37A3O60309 1634 aa20.38■□□□□ 0.85
TCF3-212ENST00000588136 SRGAP3O43295 1099 aa20.38■□□□□ 0.85
TCF3-212ENST00000588136 PTMSP20962 102 aa20.38■□□□□ 0.85
TCF3-212ENST00000588136 CWC22Q9HCG8 908 aaKnown RBP20.38■□□□□ 0.85
TCF3-212ENST00000588136 TMEM63CQ9P1W3 806 aa20.38■□□□□ 0.85
TCF3-212ENST00000588136 MPRIPQ6WCQ1 1025 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms