RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	CPSF1	Q10570	1443 aa	Known RBP	11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	TTC21A	Q8NDW8	1320 aa		11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	EDC4	Q6P2E9	1401 aa	Known RBP	11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ITSN1	Q15811	1721 aa		11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	SPATA31A3	Q5VYP0	1347 aa		11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ZNF500	O60304	480 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ZSCAN23	Q3MJ62	389 aa		11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	KIF2C	Q99661	725 aa		11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	FYB1	O15117	783 aa		11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	PKP1	Q13835	747 aa		11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	MVP	Q14764	893 aa	Known RBP	11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	KLHL40	Q2TBA0	621 aa		11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	RNF214	Q8ND24	703 aa		11.62	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	GOLGA6L22	H0YM25	854 aa		11.61	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	SNX21	Q969T3	373 aa		11.61	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ZKSCAN5	Q9Y2L8	839 aa		11.61	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	CD163L1	Q9NR16	1453 aa		11.6	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	RBM25	P49756	843 aa	Known RBP	11.6	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	SASS6	Q6UVJ0	657 aa		11.6	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ITPRIP	Q8IWB1	547 aa		11.6	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	KIF1A	Q12756	1690 aa		11.6	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ARHGEF10	O15013	1369 aa		11.6	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ADAMTS2	O95450	1211 aa		11.6	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ZBTB9	Q96C00	473 aa		11.6	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	SBNO1	A3KN83	1393 aa		11.6	□□□□□ -0.55
CACNA2D4-223	ENST00000588077		K7ELQ4	463 aa	Predicted RBP	11.59	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	ZC3H6	P61129	1189 aa	Known RBP	11.59	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	CSPP1	Q1MSJ5	1256 aa		11.59	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	TCP11L2	Q8N4U5	519 aa		11.59	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	TNS3	Q68CZ2	1445 aa		11.59	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	CLGN	O14967	610 aa		11.59	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	CHMP4C	Q96CF2	233 aa		11.59	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	SPDYE4	A6NLX3	237 aa		11.58	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	MYCN	P04198	464 aa	Predicted RBP	11.58	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.58	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	DZIP1L	Q8IYY4	767 aa	Known RBP	11.58	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.58	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	TSR2	Q969E8	191 aa	Known RBP	11.58	□□□□□ -0.55
CACNA2D4-223	ENST00000588077	TOPAZ1	Q8N9V7	1692 aa		11.58	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	PATL2	C9JE40	543 aa	Known RBP	11.58	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	FBLN1	P23142	703 aa		11.58	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	ATP2B3	Q16720	1220 aa		11.58	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	MEX3C	Q5U5Q3	659 aa	Known RBP	11.58	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	PDLIM2	Q96JY6	352 aa		11.58	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	PXDN	Q92626	1479 aa		11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	PRPF40A	O75400	957 aa	Known RBP	11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	GC	P02774	474 aa		11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	ZNF445	P59923	1031 aa		11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	ZNF710	Q8N1W2	664 aa		11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	JCAD	Q9P266	1359 aa		11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	SYCE3	A1L190	88 aa		11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	ZKSCAN2	Q63HK3	967 aa		11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	NGEF	Q8N5V2	710 aa		11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.57	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	KCNH5	Q8NCM2	988 aa		11.56	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	PHLPP1	O60346	1717 aa		11.56	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	PTMA	P06454	111 aa	Known RBP	11.56	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	TRIM27	P14373	513 aa		11.56	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	PRDM11	Q9NQV5	511 aa		11.56	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	SMC4	Q9NTJ3	1288 aa		11.56	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	LMBRD1	Q9NUN5	540 aa		11.56	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	AMPH	P49418	695 aa		11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	GPT2	Q8TD30	523 aa		11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	FAM193A	P78312	1265 aa		11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	RRS1	Q15050	365 aa	Known RBP	11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	HS1BP3	Q53T59	392 aa		11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	PNPLA6	Q8IY17	1366 aa		11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	SSH2	Q76I76	1423 aa		11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	TRIM6-TRIM34	B2RNG4	842 aa		11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	PTMS	P20962	102 aa		11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	ILDR1	Q86SU0	546 aa	Predicted RBP	11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	TRIM34	Q9BYJ4	488 aa		11.55	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.54	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	CHRNA2	Q15822	529 aa		11.54	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	SLC20A2	Q08357	652 aa		11.54	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	NSD2	O96028	1365 aa		11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	TMEM63C	Q9P1W3	806 aa		11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	TBC1D9	Q6ZT07	1266 aa		11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	TMEM57	Q8N5G2	664 aa		11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	C8orf37	Q96NL8	207 aa		11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.53	□□□□□ -0.56	8e-8	■■■■□ 25.3
CACNA2D4-223	ENST00000588077	HDAC1	Q13547	482 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	TPRN	Q4KMQ1	711 aa		11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	LTV1	Q96GA3	475 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	NGLY1	Q96IV0	654 aa		11.53	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	NHSL1	Q5SYE7	1610 aa		11.52	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	MMP14	P50281	582 aa		11.52	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	ZGPAT	Q8N5A5	531 aa	Known RBP	11.52	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	C1orf115	Q9H7X2	142 aa		11.52	□□□□□ -0.56
CACNA2D4-223	ENST00000588077	HSP90B1	P14625	803 aa	Known RBP	11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	ANKRD45	Q5TZF3	282 aa		11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	CNKSR2	Q8WXI2	1034 aa		11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	RUNDC1	Q96C34	613 aa		11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	CCDC39	Q9UFE4	941 aa		11.52	□□□□□ -0.57
CACNA2D4-223	ENST00000588077	SHPRH	Q149N8	1683 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms