RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 KCNQ4P56696 695 aa13.44□□□□□ -0.26
TPM4-207ENST00000588032 PHACTR3Q96KR7 559 aa13.44□□□□□ -0.26
TPM4-207ENST00000588032 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
TPM4-207ENST00000588032 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
TPM4-207ENST00000588032 MAP3K5Q99683 1374 aa13.44□□□□□ -0.26
TPM4-207ENST00000588032 TFCP2L1Q9NZI6 479 aa13.43□□□□□ -0.26
TPM4-207ENST00000588032 PAPPAQ13219 1627 aa13.42□□□□□ -0.26
TPM4-207ENST00000588032 HTATSF1O43719 755 aaKnown RBP13.42□□□□□ -0.26
TPM4-207ENST00000588032 ATP6V1AP38606 617 aa13.42□□□□□ -0.26
TPM4-207ENST00000588032 ZNF827Q17R98 1081 aa13.42□□□□□ -0.26
TPM4-207ENST00000588032 SPON1Q9HCB6 807 aa13.42□□□□□ -0.26
TPM4-207ENST00000588032 FLAD1Q8NFF5 587 aa13.41□□□□□ -0.26
TPM4-207ENST00000588032 IL17REQ8NFR9 667 aa13.41□□□□□ -0.26
TPM4-207ENST00000588032 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
TPM4-207ENST00000588032 RTF1Q92541 710 aaKnown RBP13.41□□□□□ -0.26
TPM4-207ENST00000588032 PLEKHF1Q96S99 279 aa13.41□□□□□ -0.26
TPM4-207ENST00000588032 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
TPM4-207ENST00000588032 TEFQ10587 303 aa13.4□□□□□ -0.26
TPM4-207ENST00000588032 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
TPM4-207ENST00000588032 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
TPM4-207ENST00000588032 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
TPM4-207ENST00000588032 DCAF8L1A6NGE4 600 aa13.39□□□□□ -0.27
TPM4-207ENST00000588032 WDR43Q15061 677 aaKnown RBP eCLIP13.39□□□□□ -0.27
TPM4-207ENST00000588032 AK7Q96M32 723 aa13.39□□□□□ -0.27
TPM4-207ENST00000588032 MRC1P22897 1456 aa13.39□□□□□ -0.27
TPM4-207ENST00000588032 LRP5O75197 1615 aa13.39□□□□□ -0.27
TPM4-207ENST00000588032 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
TPM4-207ENST00000588032 CEMIPQ8WUJ3 1361 aa13.38□□□□□ -0.27
TPM4-207ENST00000588032 ANP32CO43423 234 aa13.38□□□□□ -0.27
TPM4-207ENST00000588032 PTCD1O75127 700 aaKnown RBP13.38□□□□□ -0.27
TPM4-207ENST00000588032 RC3H1Q5TC82 1133 aaKnown RBP13.38□□□□□ -0.27
TPM4-207ENST00000588032 PDGFDQ9GZP0 370 aaPredicted RBP13.38□□□□□ -0.27
TPM4-207ENST00000588032 PNPLA7Q6ZV29 1317 aa13.38□□□□□ -0.27
TPM4-207ENST00000588032 ITPK1Q13572 414 aa13.37□□□□□ -0.27
TPM4-207ENST00000588032 NFE2L2Q16236 605 aa13.37□□□□□ -0.27
TPM4-207ENST00000588032 VSIG10Q8N0Z9 540 aa13.37□□□□□ -0.27
TPM4-207ENST00000588032 LINC00116Q8NCU8 138 aa13.37□□□□□ -0.27
TPM4-207ENST00000588032 ZBTB7AO95365 584 aa13.36□□□□□ -0.27
TPM4-207ENST00000588032 SSFA2P28290 1259 aa13.36□□□□□ -0.27
TPM4-207ENST00000588032 TTC5Q8N0Z6 440 aa13.36□□□□□ -0.27
TPM4-207ENST00000588032 SLC4A9Q96Q91 983 aa13.36□□□□□ -0.27
TPM4-207ENST00000588032 C5P01031 1676 aa13.36□□□□□ -0.27
TPM4-207ENST00000588032 ZNF831Q5JPB2 1677 aa13.36□□□□□ -0.27
TPM4-207ENST00000588032 CASZ1Q86V15 1759 aa13.35□□□□□ -0.27
TPM4-207ENST00000588032 SLC39A6Q13433 755 aa13.35□□□□□ -0.27
TPM4-207ENST00000588032 ZNF790Q6PG37 636 aa13.35□□□□□ -0.27
TPM4-207ENST00000588032 COL23A1Q86Y22 540 aaPredicted RBP13.35□□□□□ -0.27
TPM4-207ENST00000588032 CNTNAP4Q9C0A0 1308 aa13.35□□□□□ -0.27
TPM4-207ENST00000588032 C4BP0C0L5 1744 aa13.34□□□□□ -0.27
TPM4-207ENST00000588032 QSER1Q2KHR3 1735 aa13.34□□□□□ -0.27
TPM4-207ENST00000588032 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
TPM4-207ENST00000588032 GNPATO15228 680 aa13.34□□□□□ -0.27
TPM4-207ENST00000588032 MCM10Q7L590 875 aa13.34□□□□□ -0.27
TPM4-207ENST00000588032 RUNDC1Q96C34 613 aa13.34□□□□□ -0.27
TPM4-207ENST00000588032 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
TPM4-207ENST00000588032 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
TPM4-207ENST00000588032 ADAMTS8Q9UP79 889 aa13.34□□□□□ -0.27
TPM4-207ENST00000588032 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
TPM4-207ENST00000588032 RTCBQ9Y3I0 505 aaKnown RBP13.34□□□□□ -0.27
TPM4-207ENST00000588032 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
TPM4-207ENST00000588032 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
TPM4-207ENST00000588032 RPS6KA4O75676 772 aa13.33□□□□□ -0.28
TPM4-207ENST00000588032 PTGER2P43116 358 aa13.33□□□□□ -0.28
TPM4-207ENST00000588032 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.28
TPM4-207ENST00000588032 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
TPM4-207ENST00000588032 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.28
TPM4-207ENST00000588032 POLD1P28340 1107 aa13.32□□□□□ -0.28
TPM4-207ENST00000588032 TMPOP42166 694 aaKnown RBP13.32□□□□□ -0.28
TPM4-207ENST00000588032 RIPK4P57078 832 aa13.32□□□□□ -0.28
TPM4-207ENST00000588032 TRAPPC3LQ5T215 181 aa13.32□□□□□ -0.28
TPM4-207ENST00000588032 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
TPM4-207ENST00000588032 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
TPM4-207ENST00000588032 STARD3NLO95772 234 aa13.31□□□□□ -0.28
TPM4-207ENST00000588032 CRKLP46109 303 aaKnown RBP13.31□□□□□ -0.28
TPM4-207ENST00000588032 DCTN1Q14203 1278 aa13.31□□□□□ -0.28
TPM4-207ENST00000588032 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
TPM4-207ENST00000588032 ZNF496Q96IT1 587 aaPredicted RBP13.31□□□□□ -0.28
TPM4-207ENST00000588032 PHF14O94880 888 aa13.3□□□□□ -0.28
TPM4-207ENST00000588032 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
TPM4-207ENST00000588032 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
TPM4-207ENST00000588032 CCDC87Q9NVE4 849 aa13.3□□□□□ -0.28
TPM4-207ENST00000588032 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
TPM4-207ENST00000588032 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
TPM4-207ENST00000588032 KCPQ6ZWJ8 1503 aa13.29□□□□□ -0.28
TPM4-207ENST00000588032 CICQ96RK0 1608 aaPredicted RBP13.29□□□□□ -0.28
TPM4-207ENST00000588032 INTS5Q6P9B9 1019 aaKnown RBP13.29□□□□□ -0.28
TPM4-207ENST00000588032 CCDC146Q8IYE0 955 aa13.29□□□□□ -0.28
TPM4-207ENST00000588032 ARXQ96QS3 562 aa13.29□□□□□ -0.28
TPM4-207ENST00000588032 BABAM1Q9NWV8 329 aa13.29□□□□□ -0.28
TPM4-207ENST00000588032 RFC4P35249 363 aa13.28□□□□□ -0.28
TPM4-207ENST00000588032 AMIGO3Q86WK7 504 aa13.28□□□□□ -0.28
TPM4-207ENST00000588032 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
TPM4-207ENST00000588032 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
TPM4-207ENST00000588032 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.28
TPM4-207ENST00000588032 KCNQ3O43525 872 aa13.27□□□□□ -0.29
TPM4-207ENST00000588032 SNRPA1P09661 255 aaKnown RBP13.27□□□□□ -0.29
TPM4-207ENST00000588032 NLGN1Q8N2Q7 840 aa13.27□□□□□ -0.29
TPM4-207ENST00000588032 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
TPM4-207ENST00000588032 TUBGCP6Q96RT7 1819 aa13.27□□□□□ -0.29
TPM4-207ENST00000588032 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms