RNA–Protein interactions for RNA: ENST00000586799.1

DNMT1-209, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-209ENST00000586799 KCPQ6ZWJ8 1503 aa16.52■□□□□ 0.24
DNMT1-209ENST00000586799 CARD11Q9BXL7 1154 aa16.52■□□□□ 0.24
DNMT1-209ENST00000586799 RRAGCQ9HB90 399 aa16.52■□□□□ 0.24
DNMT1-209ENST00000586799 KDM2BQ8NHM5 1336 aa16.51■□□□□ 0.23
DNMT1-209ENST00000586799 PKD1L3Q7Z443 1732 aa16.51■□□□□ 0.23
DNMT1-209ENST00000586799 PCNTO95613 3336 aa16.51■□□□□ 0.23
DNMT1-209ENST00000586799 KCNA3P22001 575 aa16.51■□□□□ 0.23
DNMT1-209ENST00000586799 NKX1-1Q15270 411 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-209ENST00000586799 NLGN1Q8N2Q7 840 aa16.51■□□□□ 0.23
DNMT1-209ENST00000586799 ARFGEF1Q9Y6D6 1849 aa16.51■□□□□ 0.23
DNMT1-209ENST00000586799 ATP6V1AP38606 617 aa16.5■□□□□ 0.23
DNMT1-209ENST00000586799 TMF1P82094 1093 aa16.5■□□□□ 0.23
DNMT1-209ENST00000586799 HSP90AB2PQ58FF8 381 aa16.5■□□□□ 0.23
DNMT1-209ENST00000586799 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
DNMT1-209ENST00000586799 INSRP06213 1382 aa16.5■□□□□ 0.23
DNMT1-209ENST00000586799 HSPA1AP0DMV8 641 aaKnown RBP16.49■□□□□ 0.23
DNMT1-209ENST00000586799 HSPA1BP0DMV9 641 aaKnown RBP16.49■□□□□ 0.23
DNMT1-209ENST00000586799 TRIM26Q12899 539 aaPredicted RBP16.49■□□□□ 0.23
DNMT1-209ENST00000586799 CCDC87Q9NVE4 849 aa16.49■□□□□ 0.23
DNMT1-209ENST00000586799 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
DNMT1-209ENST00000586799 SMC1BQ8NDV3 1235 aa16.48■□□□□ 0.23
DNMT1-209ENST00000586799 RNF181Q9P0P0 153 aa16.48■□□□□ 0.23
DNMT1-209ENST00000586799 TNRC6CQ9HCJ0 1690 aaKnown RBP16.48■□□□□ 0.23
DNMT1-209ENST00000586799 TONSLQ96HA7 1378 aa16.48■□□□□ 0.23
DNMT1-209ENST00000586799 C4AP0C0L4 1744 aa16.48■□□□□ 0.23
DNMT1-209ENST00000586799 FYB1O15117 783 aa16.47■□□□□ 0.23
DNMT1-209ENST00000586799 GGNBP2Q9H3C7 697 aa16.47■□□□□ 0.23
DNMT1-209ENST00000586799 TMOD3Q9NYL9 352 aa16.47■□□□□ 0.23
DNMT1-209ENST00000586799 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
DNMT1-209ENST00000586799 SBF1O95248 1867 aa16.46■□□□□ 0.23
DNMT1-209ENST00000586799 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.23
DNMT1-209ENST00000586799 DCAF5Q96JK2 942 aa16.46■□□□□ 0.23
DNMT1-209ENST00000586799 PIM2Q9P1W9 311 aa16.46■□□□□ 0.23
DNMT1-209ENST00000586799 GYS1P13807 737 aa16.45■□□□□ 0.22
DNMT1-209ENST00000586799 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
DNMT1-209ENST00000586799 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
DNMT1-209ENST00000586799 PARP3Q9Y6F1 533 aa16.45■□□□□ 0.22
DNMT1-209ENST00000586799 FLT4P35916 1363 aa16.44■□□□□ 0.22
DNMT1-209ENST00000586799 DALRD3Q5D0E6 543 aaKnown RBP16.43■□□□□ 0.22
DNMT1-209ENST00000586799 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
DNMT1-209ENST00000586799 ADRA2BP18089 450 aa16.42■□□□□ 0.22
DNMT1-209ENST00000586799 RFC4P35249 363 aa16.42■□□□□ 0.22
DNMT1-209ENST00000586799 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
DNMT1-209ENST00000586799 SLC4A9Q96Q91 983 aa16.42■□□□□ 0.22
DNMT1-209ENST00000586799 TESK2Q96S53 571 aa16.42■□□□□ 0.22
DNMT1-209ENST00000586799 NCAPD2Q15021 1401 aa16.42■□□□□ 0.22
DNMT1-209ENST00000586799 KDRP35968 1356 aa16.41■□□□□ 0.22
DNMT1-209ENST00000586799 SLC34A2O95436 690 aa16.41■□□□□ 0.22
DNMT1-209ENST00000586799 RPS6KA4O75676 772 aa16.4■□□□□ 0.22
DNMT1-209ENST00000586799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.4■□□□□ 0.224e-6■■□□□ 13.6
DNMT1-209ENST00000586799 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
DNMT1-209ENST00000586799 PHKG2P15735 406 aa16.39■□□□□ 0.21
DNMT1-209ENST00000586799 IFNL2Q8IZJ0 200 aa16.39■□□□□ 0.21
DNMT1-209ENST00000586799 CNTNAP4Q9C0A0 1308 aa16.39■□□□□ 0.21
DNMT1-209ENST00000586799 VEGFAP15692 232 aaPredicted RBP16.38■□□□□ 0.21
DNMT1-209ENST00000586799 CHRNA5P30532 468 aa16.38■□□□□ 0.21
DNMT1-209ENST00000586799 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
DNMT1-209ENST00000586799 COL5A3P25940 1745 aaPredicted RBP16.38■□□□□ 0.21
DNMT1-209ENST00000586799 MYH14Q7Z406 1995 aaKnown RBP16.38■□□□□ 0.21
DNMT1-209ENST00000586799 ST20-MTHFSA0A0A6YYL1 179 aa16.37■□□□□ 0.21
DNMT1-209ENST00000586799 GLTPD2A6NH11 291 aa16.37■□□□□ 0.21
DNMT1-209ENST00000586799 EMILIN1Q9Y6C2 1016 aa16.37■□□□□ 0.21
DNMT1-209ENST00000586799 ZC3H4Q9UPT8 1303 aaKnown RBP16.37■□□□□ 0.21
DNMT1-209ENST00000586799 RASSF7Q02833 373 aa16.36■□□□□ 0.21
DNMT1-209ENST00000586799 EYA1Q99502 592 aa16.36■□□□□ 0.21
DNMT1-209ENST00000586799 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
DNMT1-209ENST00000586799 KIF20BQ96Q89 1820 aa16.35■□□□□ 0.21
DNMT1-209ENST00000586799 DDR1Q08345 913 aa16.35■□□□□ 0.21
DNMT1-209ENST00000586799 SRP68Q9UHB9 627 aaKnown RBP16.35■□□□□ 0.21
DNMT1-209ENST00000586799 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
DNMT1-209ENST00000586799 FKBP8Q14318 412 aa16.34■□□□□ 0.21
DNMT1-209ENST00000586799 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.2
DNMT1-209ENST00000586799 LMNB1P20700 586 aa16.33■□□□□ 0.2
DNMT1-209ENST00000586799 POTECB2RU33 542 aa16.32■□□□□ 0.2
DNMT1-209ENST00000586799 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
DNMT1-209ENST00000586799 CCDC88AQ3V6T2 1871 aa16.32■□□□□ 0.2
DNMT1-209ENST00000586799 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
DNMT1-209ENST00000586799 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
DNMT1-209ENST00000586799 POLRMTO00411 1230 aaKnown RBP16.31■□□□□ 0.2
DNMT1-209ENST00000586799 FOXN1O15353 648 aa16.31■□□□□ 0.2
DNMT1-209ENST00000586799 TM4SF1P30408 202 aa16.31■□□□□ 0.2
DNMT1-209ENST00000586799 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
DNMT1-209ENST00000586799 MKRN1Q9UHC7 482 aaKnown RBP16.3■□□□□ 0.2
DNMT1-209ENST00000586799 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
DNMT1-209ENST00000586799 TIAM2Q8IVF5 1701 aa16.29■□□□□ 0.2
DNMT1-209ENST00000586799 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
DNMT1-209ENST00000586799 CREBZFQ9NS37 354 aa16.29■□□□□ 0.2
DNMT1-209ENST00000586799 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.2
DNMT1-209ENST00000586799 CARD14Q9BXL6 1004 aa16.27■□□□□ 0.2
DNMT1-209ENST00000586799 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
DNMT1-209ENST00000586799 CABP4P57796 275 aa16.26■□□□□ 0.19
DNMT1-209ENST00000586799 DPY19L2Q6NUT2 758 aa16.26■□□□□ 0.19
DNMT1-209ENST00000586799 ADAMTS7Q9UKP4 1686 aa16.26■□□□□ 0.19
DNMT1-209ENST00000586799 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
DNMT1-209ENST00000586799 DLEC1Q9Y238 1755 aa16.26■□□□□ 0.19
DNMT1-209ENST00000586799 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
DNMT1-209ENST00000586799 NFKBIEO00221 500 aa16.25■□□□□ 0.19
DNMT1-209ENST00000586799 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
DNMT1-209ENST00000586799 TTLL6Q8N841 843 aa16.25■□□□□ 0.19
DNMT1-209ENST00000586799 USPL1Q5W0Q7 1092 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms