RNA–Protein interactions for RNA: ENST00000586737.5

ERCC2-208, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-208ENST00000586737 ITGB4P16144 1822 aa17.51■□□□□ 0.39
ERCC2-208ENST00000586737 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
ERCC2-208ENST00000586737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.51■□□□□ 0.39
ERCC2-208ENST00000586737 CABP4P57796 275 aa17.51■□□□□ 0.39
ERCC2-208ENST00000586737 CNGB1Q14028 1251 aaPredicted RBP17.51■□□□□ 0.39
ERCC2-208ENST00000586737 COL24A1Q17RW2 1714 aa17.51■□□□□ 0.39
ERCC2-208ENST00000586737 C1orf141Q5JVX7 400 aa17.51■□□□□ 0.39
ERCC2-208ENST00000586737 NFATC2IPQ8NCF5 419 aa17.5■□□□□ 0.39
ERCC2-208ENST00000586737 C5P01031 1676 aa17.5■□□□□ 0.39
ERCC2-208ENST00000586737 C4BP0C0L5 1744 aa17.5■□□□□ 0.39
ERCC2-208ENST00000586737 PHF14O94880 888 aa17.49■□□□□ 0.39
ERCC2-208ENST00000586737 SSFA2P28290 1259 aa17.49■□□□□ 0.39
ERCC2-208ENST00000586737 AKAP4Q5JQC9 854 aa17.49■□□□□ 0.39
ERCC2-208ENST00000586737 NLGN2Q8NFZ4 835 aa17.49■□□□□ 0.39
ERCC2-208ENST00000586737 LGR6Q9HBX8 967 aa17.49■□□□□ 0.39
ERCC2-208ENST00000586737 UTRNP46939 3433 aa17.49■□□□□ 0.39
ERCC2-208ENST00000586737 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
ERCC2-208ENST00000586737 YY1P25490 414 aa17.48■□□□□ 0.39
ERCC2-208ENST00000586737 MTHFSDQ2M296 383 aaKnown RBP17.48■□□□□ 0.39
ERCC2-208ENST00000586737 GNPATO15228 680 aa17.47■□□□□ 0.39
ERCC2-208ENST00000586737 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
ERCC2-208ENST00000586737 KLHL34Q8N239 644 aa17.46■□□□□ 0.39
ERCC2-208ENST00000586737 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
ERCC2-208ENST00000586737 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
ERCC2-208ENST00000586737 RC3H1Q5TC82 1133 aaKnown RBP17.45■□□□□ 0.38
ERCC2-208ENST00000586737 SLC52A2Q9HAB3 445 aa17.45■□□□□ 0.38
ERCC2-208ENST00000586737 PTCD1O75127 700 aaKnown RBP17.44■□□□□ 0.38
ERCC2-208ENST00000586737 CNTNAP4Q9C0A0 1308 aa17.44■□□□□ 0.38
ERCC2-208ENST00000586737 PPP2R1AP30153 589 aa17.43■□□□□ 0.38
ERCC2-208ENST00000586737 U2SURPO15042 1029 aaKnown RBP17.42■□□□□ 0.38
ERCC2-208ENST00000586737 RPS6KA4O75676 772 aa17.42■□□□□ 0.38
ERCC2-208ENST00000586737 RTCBQ9Y3I0 505 aaKnown RBP17.42■□□□□ 0.38
ERCC2-208ENST00000586737 CD2APQ9Y5K6 639 aa17.42■□□□□ 0.38
ERCC2-208ENST00000586737 MRC1P22897 1456 aa17.42■□□□□ 0.38
ERCC2-208ENST00000586737 ARHGEF1Q92888 912 aaKnown RBP17.41■□□□□ 0.38
ERCC2-208ENST00000586737 UBR3Q6ZT12 1888 aa17.4■□□□□ 0.38
ERCC2-208ENST00000586737 YBX3P16989 372 aaKnown RBP eCLIP17.4■□□□□ 0.38
ERCC2-208ENST00000586737 SLC39A6Q13433 755 aa17.4■□□□□ 0.38
ERCC2-208ENST00000586737 GPR162Q16538 588 aa17.4■□□□□ 0.38
ERCC2-208ENST00000586737 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
ERCC2-208ENST00000586737 ADRA2BP18089 450 aa17.39■□□□□ 0.37
ERCC2-208ENST00000586737 CRKLP46109 303 aaKnown RBP17.39■□□□□ 0.37
ERCC2-208ENST00000586737 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
ERCC2-208ENST00000586737 IL17REQ8NFR9 667 aa17.39■□□□□ 0.37
ERCC2-208ENST00000586737 PHACTR3Q96KR7 559 aa17.39■□□□□ 0.37
ERCC2-208ENST00000586737 RSPH6AQ9H0K4 717 aa17.39■□□□□ 0.37
ERCC2-208ENST00000586737 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
ERCC2-208ENST00000586737 DNAJC10Q8IXB1 793 aa17.38■□□□□ 0.37
ERCC2-208ENST00000586737 GOLGB1Q14789 3259 aaKnown RBP17.38■□□□□ 0.37
ERCC2-208ENST00000586737 MMP10P09238 476 aa17.37■□□□□ 0.37
ERCC2-208ENST00000586737 GYS1P13807 737 aa17.37■□□□□ 0.37
ERCC2-208ENST00000586737 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
ERCC2-208ENST00000586737 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
ERCC2-208ENST00000586737 GAS2L2Q8NHY3 880 aa17.36■□□□□ 0.37
ERCC2-208ENST00000586737 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
ERCC2-208ENST00000586737 GNAT3A8MTJ3 354 aa17.35■□□□□ 0.37
ERCC2-208ENST00000586737 CYP19A1P11511 503 aaPredicted RBP17.35■□□□□ 0.37
ERCC2-208ENST00000586737 PELP1Q8IZL8 1130 aaKnown RBP17.35■□□□□ 0.37
ERCC2-208ENST00000586737 NLGN1Q8N2Q7 840 aa17.35■□□□□ 0.37
ERCC2-208ENST00000586737 KCPQ6ZWJ8 1503 aa17.35■□□□□ 0.37
ERCC2-208ENST00000586737 ZNF784Q8NCA9 323 aaPredicted RBP17.34■□□□□ 0.37
ERCC2-208ENST00000586737 SRP68Q9UHB9 627 aaKnown RBP17.34■□□□□ 0.37
ERCC2-208ENST00000586737 SCN11AQ9UI33 1791 aa17.33■□□□□ 0.37
ERCC2-208ENST00000586737 COL5A3P25940 1745 aaPredicted RBP17.33■□□□□ 0.37
ERCC2-208ENST00000586737 CEMIPQ8WUJ3 1361 aa17.33■□□□□ 0.36
ERCC2-208ENST00000586737 RFC4P35249 363 aa17.33■□□□□ 0.36
ERCC2-208ENST00000586737 NUDCQ9Y266 331 aa17.33■□□□□ 0.36
ERCC2-208ENST00000586737 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
ERCC2-208ENST00000586737 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
ERCC2-208ENST00000586737 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
ERCC2-208ENST00000586737 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
ERCC2-208ENST00000586737 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
ERCC2-208ENST00000586737 CCDC87Q9NVE4 849 aa17.32■□□□□ 0.36
ERCC2-208ENST00000586737 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
ERCC2-208ENST00000586737 TJP1Q07157 1748 aa17.31■□□□□ 0.36
ERCC2-208ENST00000586737 GRIN3BO60391 1043 aa17.31■□□□□ 0.36
ERCC2-208ENST00000586737 FCHSD2O94868 740 aa17.31■□□□□ 0.36
ERCC2-208ENST00000586737 FKBP8Q14318 412 aa17.31■□□□□ 0.36
ERCC2-208ENST00000586737 ZNF496Q96IT1 587 aaPredicted RBP17.31■□□□□ 0.36
ERCC2-208ENST00000586737 MYH14Q7Z406 1995 aaKnown RBP17.3■□□□□ 0.36
ERCC2-208ENST00000586737 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
ERCC2-208ENST00000586737 ZBTB1Q9Y2K1 713 aa17.3■□□□□ 0.36
ERCC2-208ENST00000586737 DDR1Q08345 913 aa17.29■□□□□ 0.36
ERCC2-208ENST00000586737 TEFQ10587 303 aa17.29■□□□□ 0.36
ERCC2-208ENST00000586737 C10orf71Q711Q0 1435 aa17.29■□□□□ 0.36
ERCC2-208ENST00000586737 KCNQ3O43525 872 aa17.28■□□□□ 0.36
ERCC2-208ENST00000586737 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
ERCC2-208ENST00000586737 PXDNLA1KZ92 1463 aa17.28■□□□□ 0.36
ERCC2-208ENST00000586737 TM4SF1P30408 202 aa17.27■□□□□ 0.36
ERCC2-208ENST00000586737 HEG1Q9ULI3 1381 aa17.27■□□□□ 0.35
ERCC2-208ENST00000586737 TGFB2P61812 414 aa17.26■□□□□ 0.35
ERCC2-208ENST00000586737 USPL1Q5W0Q7 1092 aa17.26■□□□□ 0.35
ERCC2-208ENST00000586737 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
ERCC2-208ENST00000586737 BCL2L12Q9HB09 334 aa17.26■□□□□ 0.35
ERCC2-208ENST00000586737 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
ERCC2-208ENST00000586737 EIF5P55010 431 aaKnown RBP17.25■□□□□ 0.35
ERCC2-208ENST00000586737 MCM10Q7L590 875 aa17.25■□□□□ 0.35
ERCC2-208ENST00000586737 NARFQ9UHQ1 456 aa17.25■□□□□ 0.35
ERCC2-208ENST00000586737 PARP3Q9Y6F1 533 aa17.25■□□□□ 0.35
ERCC2-208ENST00000586737 COL15A1P39059 1388 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms