RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 PNPLA7Q6ZV29 1317 aa28.92■■■□□ 2.22
R3HDM4-202ENST00000586080 MAP3K5Q99683 1374 aa28.91■■■□□ 2.22
R3HDM4-202ENST00000586080 ATP6V1AP38606 617 aa28.91■■■□□ 2.22
R3HDM4-202ENST00000586080 PHACTR3Q96KR7 559 aa28.91■■■□□ 2.22
R3HDM4-202ENST00000586080 MYBBP1AQ9BQG0 1328 aaKnown RBP28.91■■■□□ 2.22
R3HDM4-202ENST00000586080 FCHSD2O94868 740 aa28.9■■■□□ 2.22
R3HDM4-202ENST00000586080 AK7Q96M32 723 aa28.9■■■□□ 2.22
R3HDM4-202ENST00000586080 SLC52A2Q9HAB3 445 aa28.9■■■□□ 2.22
R3HDM4-202ENST00000586080 MSH5O43196 834 aa28.89■■■□□ 2.22
R3HDM4-202ENST00000586080 MTFR1LQ9H019 292 aa28.89■■■□□ 2.22
R3HDM4-202ENST00000586080 C5P01031 1676 aa28.89■■■□□ 2.21
R3HDM4-202ENST00000586080 ZNF316A6NFI3 1004 aaPredicted RBP28.88■■■□□ 2.21
R3HDM4-202ENST00000586080 GNAT3A8MTJ3 354 aa28.88■■■□□ 2.21
R3HDM4-202ENST00000586080 LINC00116Q8NCU8 138 aa28.88■■■□□ 2.21
R3HDM4-202ENST00000586080 PTCD1O75127 700 aaKnown RBP28.87■■■□□ 2.21
R3HDM4-202ENST00000586080 ITPK1Q13572 414 aa28.87■■■□□ 2.21
R3HDM4-202ENST00000586080 SCN11AQ9UI33 1791 aa28.85■■■□□ 2.21
R3HDM4-202ENST00000586080 MRC1P22897 1456 aa28.85■■■□□ 2.21
R3HDM4-202ENST00000586080 NEFMP07197 916 aa28.84■■■□□ 2.21
R3HDM4-202ENST00000586080 C4BP0C0L5 1744 aa28.83■■■□□ 2.21
R3HDM4-202ENST00000586080 PHF14O94880 888 aa28.83■■■□□ 2.21
R3HDM4-202ENST00000586080 SLC4A9Q96Q91 983 aa28.83■■■□□ 2.21
R3HDM4-202ENST00000586080 TEFQ10587 303 aa28.82■■■□□ 2.2
R3HDM4-202ENST00000586080 PRKRIP1Q9H875 184 aaPredicted RBP28.82■■■□□ 2.2
R3HDM4-202ENST00000586080 PTGER2P43116 358 aa28.81■■■□□ 2.2
R3HDM4-202ENST00000586080 SLC39A6Q13433 755 aa28.81■■■□□ 2.2
R3HDM4-202ENST00000586080 COL23A1Q86Y22 540 aaPredicted RBP28.81■■■□□ 2.2
R3HDM4-202ENST00000586080 IL17REQ8NFR9 667 aa28.81■■■□□ 2.2
R3HDM4-202ENST00000586080 TUBGCP6Q96RT7 1819 aa28.8■■■□□ 2.2
R3HDM4-202ENST00000586080 GNPATO15228 680 aa28.8■■■□□ 2.2
R3HDM4-202ENST00000586080 SLC16A10Q8TF71 515 aa28.8■■■□□ 2.2
R3HDM4-202ENST00000586080 TAF1LQ8IZX4 1826 aa28.79■■■□□ 2.2
R3HDM4-202ENST00000586080 SMIM5Q71RC9 77 aa28.79■■■□□ 2.2
R3HDM4-202ENST00000586080 FLAD1Q8NFF5 587 aa28.79■■■□□ 2.2
R3HDM4-202ENST00000586080 RTF1Q92541 710 aaKnown RBP28.79■■■□□ 2.2
R3HDM4-202ENST00000586080 QSER1Q2KHR3 1735 aa28.79■■■□□ 2.2
R3HDM4-202ENST00000586080 ADAMTS7Q9UKP4 1686 aa28.78■■■□□ 2.2
R3HDM4-202ENST00000586080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.77■■■□□ 2.2
R3HDM4-202ENST00000586080 AMIGO3Q86WK7 504 aa28.77■■■□□ 2.2
R3HDM4-202ENST00000586080 MAPK8IP3Q9UPT6 1336 aa28.76■■■□□ 2.19
R3HDM4-202ENST00000586080 PNNQ9H307 717 aaKnown RBP28.76■■■□□ 2.19
R3HDM4-202ENST00000586080 MSL1Q68DK7 614 aa28.75■■■□□ 2.19
R3HDM4-202ENST00000586080 TTC5Q8N0Z6 440 aa28.75■■■□□ 2.19
R3HDM4-202ENST00000586080 SSFA2P28290 1259 aa28.74■■■□□ 2.19
R3HDM4-202ENST00000586080 POLD1P28340 1107 aa28.74■■■□□ 2.19
R3HDM4-202ENST00000586080 MCM10Q7L590 875 aa28.74■■■□□ 2.19
R3HDM4-202ENST00000586080 SGIP1Q9BQI5 828 aa28.74■■■□□ 2.19
R3HDM4-202ENST00000586080 CEMIPQ8WUJ3 1361 aa28.74■■■□□ 2.19
R3HDM4-202ENST00000586080 WDR43Q15061 677 aaKnown RBP eCLIP28.73■■■□□ 2.19
R3HDM4-202ENST00000586080 PLEKHF1Q96S99 279 aa28.73■■■□□ 2.19
R3HDM4-202ENST00000586080 CNTNAP4Q9C0A0 1308 aa28.72■■■□□ 2.19
R3HDM4-202ENST00000586080 DCTN1Q14203 1278 aa28.72■■■□□ 2.19
R3HDM4-202ENST00000586080 RTCBQ9Y3I0 505 aaKnown RBP28.72■■■□□ 2.19
R3HDM4-202ENST00000586080 ARXQ96QS3 562 aa28.71■■■□□ 2.19
R3HDM4-202ENST00000586080 RC3H1Q5TC82 1133 aaKnown RBP28.7■■■□□ 2.18
R3HDM4-202ENST00000586080 DNAJC10Q8IXB1 793 aa28.7■■■□□ 2.18
R3HDM4-202ENST00000586080 ZNF831Q5JPB2 1677 aa28.7■■■□□ 2.18
R3HDM4-202ENST00000586080 KCPQ6ZWJ8 1503 aa28.69■■■□□ 2.18
R3HDM4-202ENST00000586080 VIRMAQ69YN4 1812 aaKnown RBP28.69■■■□□ 2.18
R3HDM4-202ENST00000586080 CRKLP46109 303 aaKnown RBP28.69■■■□□ 2.18
R3HDM4-202ENST00000586080 NFE2L2Q16236 605 aa28.69■■■□□ 2.18
R3HDM4-202ENST00000586080 BTBD11A6QL63 1104 aa28.68■■■□□ 2.18
R3HDM4-202ENST00000586080 HTATSF1O43719 755 aaKnown RBP28.68■■■□□ 2.18
R3HDM4-202ENST00000586080 ZNF790Q6PG37 636 aa28.68■■■□□ 2.18
R3HDM4-202ENST00000586080 KLHL34Q8N239 644 aa28.68■■■□□ 2.18
R3HDM4-202ENST00000586080 UBR3Q6ZT12 1888 aa28.67■■■□□ 2.18
R3HDM4-202ENST00000586080 TRAPPC3LQ5T215 181 aa28.66■■■□□ 2.18
R3HDM4-202ENST00000586080 FHDC1Q9C0D6 1143 aaPredicted RBP28.66■■■□□ 2.18
R3HDM4-202ENST00000586080 RPS6KA4O75676 772 aa28.65■■■□□ 2.18
R3HDM4-202ENST00000586080 CCDC146Q8IYE0 955 aa28.65■■■□□ 2.18
R3HDM4-202ENST00000586080 COL5A3P25940 1745 aaPredicted RBP28.65■■■□□ 2.18
R3HDM4-202ENST00000586080 TJP1Q07157 1748 aa28.65■■■□□ 2.18
R3HDM4-202ENST00000586080 ZNF496Q96IT1 587 aaPredicted RBP28.64■■■□□ 2.18
R3HDM4-202ENST00000586080 VSIG10Q8N0Z9 540 aa28.63■■■□□ 2.17
R3HDM4-202ENST00000586080 CCDC87Q9NVE4 849 aa28.63■■■□□ 2.17
R3HDM4-202ENST00000586080 KCNQ3O43525 872 aa28.62■■■□□ 2.17
R3HDM4-202ENST00000586080 ADRA2BP18089 450 aa28.62■■■□□ 2.17
R3HDM4-202ENST00000586080 FMNL2Q96PY5 1086 aa28.62■■■□□ 2.17
R3HDM4-202ENST00000586080 ANP32CO43423 234 aa28.61■■■□□ 2.17
R3HDM4-202ENST00000586080 CYP19A1P11511 503 aaPredicted RBP28.61■■■□□ 2.17
R3HDM4-202ENST00000586080 RFC4P35249 363 aa28.61■■■□□ 2.17
R3HDM4-202ENST00000586080 INTS5Q6P9B9 1019 aaKnown RBP28.61■■■□□ 2.17
R3HDM4-202ENST00000586080 ARHGEF1Q92888 912 aaKnown RBP28.61■■■□□ 2.17
R3HDM4-202ENST00000586080 HEG1Q9ULI3 1381 aa28.61■■■□□ 2.17
R3HDM4-202ENST00000586080 SYT17Q9BSW7 474 aa28.6■■■□□ 2.17
R3HDM4-202ENST00000586080 THUMPD2Q9BTF0 503 aaKnown RBP28.6■■■□□ 2.17
R3HDM4-202ENST00000586080 ADAMTS8Q9UP79 889 aa28.6■■■□□ 2.17
R3HDM4-202ENST00000586080 CICQ96RK0 1608 aaPredicted RBP28.6■■■□□ 2.17
R3HDM4-202ENST00000586080 SIPA1L3O60292 1781 aaPredicted RBP28.6■■■□□ 2.17
R3HDM4-202ENST00000586080 UBR2Q8IWV8 1755 aa28.58■■■□□ 2.17
R3HDM4-202ENST00000586080 STARD3NLO95772 234 aa28.58■■■□□ 2.17
R3HDM4-202ENST00000586080 RIPK4P57078 832 aa28.58■■■□□ 2.17
R3HDM4-202ENST00000586080 TAF7Q15545 349 aaPredicted RBP28.58■■■□□ 2.17
R3HDM4-202ENST00000586080 RRP7AQ9Y3A4 280 aaKnown RBP28.58■■■□□ 2.17
R3HDM4-202ENST00000586080 RUNDC1Q96C34 613 aa28.57■■■□□ 2.16
R3HDM4-202ENST00000586080 ZBTB1Q9Y2K1 713 aa28.57■■■□□ 2.16
R3HDM4-202ENST00000586080 TMPOP42166 694 aaKnown RBP28.56■■■□□ 2.16
R3HDM4-202ENST00000586080 NEUROD2Q15784 382 aa28.56■■■□□ 2.16
R3HDM4-202ENST00000586080 MIS18AQ9NYP9 233 aa28.56■■■□□ 2.16
R3HDM4-202ENST00000586080 MYH14Q7Z406 1995 aaKnown RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms