RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 NEFMP07197 916 aa16.73■□□□□ 0.27
RETREG3-203ENST00000585894 LRRC4BQ9NT99 713 aa16.73■□□□□ 0.27
RETREG3-203ENST00000585894 NFE2L2Q16236 605 aa16.72■□□□□ 0.27
RETREG3-203ENST00000585894 PNISRQ8TF01 805 aaKnown RBP16.72■□□□□ 0.27
RETREG3-203ENST00000585894 SLC52A2Q9HAB3 445 aa16.72■□□□□ 0.27
RETREG3-203ENST00000585894 ATG3Q9NT62 314 aa16.72■□□□□ 0.27
RETREG3-203ENST00000585894 PAPPAQ13219 1627 aa16.71■□□□□ 0.27
RETREG3-203ENST00000585894 PNNQ9H307 717 aaKnown RBP16.71■□□□□ 0.27
RETREG3-203ENST00000585894 TAF1LQ8IZX4 1826 aa16.7■□□□□ 0.26
RETREG3-203ENST00000585894 NEUROD2Q15784 382 aa16.7■□□□□ 0.26
RETREG3-203ENST00000585894 RUNDC1Q96C34 613 aa16.7■□□□□ 0.26
RETREG3-203ENST00000585894 THUMPD2Q9BTF0 503 aaKnown RBP16.7■□□□□ 0.26
RETREG3-203ENST00000585894 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
RETREG3-203ENST00000585894 C5P01031 1676 aa16.69■□□□□ 0.26
RETREG3-203ENST00000585894 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
RETREG3-203ENST00000585894 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
RETREG3-203ENST00000585894 CCNL1Q9UK58 526 aaPredicted RBP16.69■□□□□ 0.26
RETREG3-203ENST00000585894 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
RETREG3-203ENST00000585894 TMPOP42166 694 aaKnown RBP16.68■□□□□ 0.26
RETREG3-203ENST00000585894 TEFQ10587 303 aa16.68■□□□□ 0.26
RETREG3-203ENST00000585894 RTF1Q92541 710 aaKnown RBP16.68■□□□□ 0.26
RETREG3-203ENST00000585894 RIPK4P57078 832 aa16.67■□□□□ 0.26
RETREG3-203ENST00000585894 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
RETREG3-203ENST00000585894 MIER1Q8N108 512 aa16.67■□□□□ 0.26
RETREG3-203ENST00000585894 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
RETREG3-203ENST00000585894 TUBGCP6Q96RT7 1819 aa16.67■□□□□ 0.26
RETREG3-203ENST00000585894 PTCD1O75127 700 aaKnown RBP16.67■□□□□ 0.26
RETREG3-203ENST00000585894 R3HDM1Q15032 1099 aaKnown RBP16.67■□□□□ 0.26
RETREG3-203ENST00000585894 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
RETREG3-203ENST00000585894 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
RETREG3-203ENST00000585894 LOC102724428A0A0B4J2F2 783 aa16.66■□□□□ 0.26
RETREG3-203ENST00000585894 APAF1O14727 1248 aa16.66■□□□□ 0.26
RETREG3-203ENST00000585894 SIK1P57059 783 aa16.66■□□□□ 0.26
RETREG3-203ENST00000585894 SLC4A9Q96Q91 983 aa16.66■□□□□ 0.26
RETREG3-203ENST00000585894 ZNF827Q17R98 1081 aa16.65■□□□□ 0.26
RETREG3-203ENST00000585894 SLC27A3Q5K4L6 730 aa16.65■□□□□ 0.26
RETREG3-203ENST00000585894 TJP1Q07157 1748 aa16.65■□□□□ 0.26
RETREG3-203ENST00000585894 KCPQ6ZWJ8 1503 aa16.65■□□□□ 0.26
RETREG3-203ENST00000585894 ITPK1Q13572 414 aa16.65■□□□□ 0.26
RETREG3-203ENST00000585894 KCNQ3O43525 872 aa16.64■□□□□ 0.25
RETREG3-203ENST00000585894 HTATSF1O43719 755 aaKnown RBP16.64■□□□□ 0.25
RETREG3-203ENST00000585894 MIS18AQ9NYP9 233 aa16.64■□□□□ 0.25
RETREG3-203ENST00000585894 C4BP0C0L5 1744 aa16.64■□□□□ 0.25
RETREG3-203ENST00000585894 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
RETREG3-203ENST00000585894 NBPF14Q5TI25 921 aa16.63■□□□□ 0.25
RETREG3-203ENST00000585894 TRIM35Q9UPQ4 493 aa16.63■□□□□ 0.25
RETREG3-203ENST00000585894 COL5A3P25940 1745 aaPredicted RBP16.63■□□□□ 0.25
RETREG3-203ENST00000585894 LINC00116Q8NCU8 138 aa16.62■□□□□ 0.25
RETREG3-203ENST00000585894 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
RETREG3-203ENST00000585894 KDM3BQ7LBC6 1761 aa16.62■□□□□ 0.25
RETREG3-203ENST00000585894 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
RETREG3-203ENST00000585894 PDGFDQ9GZP0 370 aaPredicted RBP16.62■□□□□ 0.25
RETREG3-203ENST00000585894 STK32BQ9NY57 414 aa16.62■□□□□ 0.25
RETREG3-203ENST00000585894 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
RETREG3-203ENST00000585894 AKT1S1Q96B36 256 aa16.61■□□□□ 0.25
RETREG3-203ENST00000585894 SLC15A2Q16348 729 aa16.6■□□□□ 0.25
RETREG3-203ENST00000585894 ZNF790Q6PG37 636 aa16.6■□□□□ 0.25
RETREG3-203ENST00000585894 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
RETREG3-203ENST00000585894 UBR3Q6ZT12 1888 aa16.6■□□□□ 0.25
RETREG3-203ENST00000585894 CCER2I3L3R5 266 aa16.59■□□□□ 0.25
RETREG3-203ENST00000585894 TTC5Q8N0Z6 440 aa16.59■□□□□ 0.25
RETREG3-203ENST00000585894 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
RETREG3-203ENST00000585894 LMOD3Q0VAK6 560 aa16.59■□□□□ 0.25
RETREG3-203ENST00000585894 TAF7Q15545 349 aaPredicted RBP16.59■□□□□ 0.25
RETREG3-203ENST00000585894 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
RETREG3-203ENST00000585894 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
RETREG3-203ENST00000585894 CICQ96RK0 1608 aaPredicted RBP16.59■□□□□ 0.25
RETREG3-203ENST00000585894 SALL2Q9Y467 1007 aaPredicted RBP16.59■□□□□ 0.25
RETREG3-203ENST00000585894 DNAJC10Q8IXB1 793 aa16.58■□□□□ 0.24
RETREG3-203ENST00000585894 QSER1Q2KHR3 1735 aa16.58■□□□□ 0.24
RETREG3-203ENST00000585894 TFCP2L1Q9NZI6 479 aa16.57■□□□□ 0.24
RETREG3-203ENST00000585894 PRAMEF22A3QJZ6 481 aa16.56■□□□□ 0.24
RETREG3-203ENST00000585894 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
RETREG3-203ENST00000585894 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
RETREG3-203ENST00000585894 PNPLA7Q6ZV29 1317 aa16.55■□□□□ 0.24
RETREG3-203ENST00000585894 PHF14O94880 888 aa16.55■□□□□ 0.24
RETREG3-203ENST00000585894 AK7Q96M32 723 aa16.55■□□□□ 0.24
RETREG3-203ENST00000585894 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
RETREG3-203ENST00000585894 GNPATO15228 680 aa16.54■□□□□ 0.24
RETREG3-203ENST00000585894 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
RETREG3-203ENST00000585894 CRKLP46109 303 aaKnown RBP16.53■□□□□ 0.24
RETREG3-203ENST00000585894 TSPYL4Q9UJ04 414 aa16.53■□□□□ 0.24
RETREG3-203ENST00000585894 CYP19A1P11511 503 aaPredicted RBP16.52■□□□□ 0.24
RETREG3-203ENST00000585894 COL23A1Q86Y22 540 aaPredicted RBP16.52■□□□□ 0.24
RETREG3-203ENST00000585894 LAMB4A4D0S4 1761 aa16.52■□□□□ 0.23
RETREG3-203ENST00000585894 CNTNAP4Q9C0A0 1308 aa16.52■□□□□ 0.23
RETREG3-203ENST00000585894 MSH5O43196 834 aa16.51■□□□□ 0.23
RETREG3-203ENST00000585894 ZBTB7AO95365 584 aa16.51■□□□□ 0.23
RETREG3-203ENST00000585894 EIF4A1P60842 406 aaKnown RBP16.51■□□□□ 0.23
RETREG3-203ENST00000585894 INTS5Q6P9B9 1019 aaKnown RBP16.51■□□□□ 0.23
RETREG3-203ENST00000585894 VSIG10Q8N0Z9 540 aa16.51■□□□□ 0.23
RETREG3-203ENST00000585894 C4AP0C0L4 1744 aa16.51■□□□□ 0.23
RETREG3-203ENST00000585894 KRT24Q2M2I5 525 aa16.5■□□□□ 0.23
RETREG3-203ENST00000585894 WWC1Q8IX03 1113 aa16.5■□□□□ 0.23
RETREG3-203ENST00000585894 USP16Q9Y5T5 823 aa16.5■□□□□ 0.23
RETREG3-203ENST00000585894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.5■□□□□ 0.23
RETREG3-203ENST00000585894 CHL1O00533 1208 aa16.5■□□□□ 0.23
RETREG3-203ENST00000585894 PIP4K2AP48426 406 aaPredicted RBP16.5■□□□□ 0.23
RETREG3-203ENST00000585894 ZBTB1Q9Y2K1 713 aa16.5■□□□□ 0.23
RETREG3-203ENST00000585894 CCDC87Q9NVE4 849 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms