RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 IFNL1Q8IU54 200 aa11.32□□□□□ -0.6
MSI2-218ENST00000583821 NBPF4Q96M43 638 aa11.32□□□□□ -0.6
MSI2-218ENST00000583821 NSD3Q9BZ95 1437 aa11.32□□□□□ -0.6
MSI2-218ENST00000583821 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
MSI2-218ENST00000583821 ZCRB1Q8TBF4 217 aaKnown RBP11.31□□□□□ -0.6
MSI2-218ENST00000583821 SMG6Q86US8 1419 aaKnown RBP11.31□□□□□ -0.6
MSI2-218ENST00000583821 HSP90AB2PQ58FF8 381 aa11.3□□□□□ -0.6
MSI2-218ENST00000583821 SYT17Q9BSW7 474 aa11.3□□□□□ -0.6
MSI2-218ENST00000583821 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
MSI2-218ENST00000583821 ARXQ96QS3 562 aa11.29□□□□□ -0.6
MSI2-218ENST00000583821 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
MSI2-218ENST00000583821 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
MSI2-218ENST00000583821 UBR3Q6ZT12 1888 aa11.29□□□□□ -0.6
MSI2-218ENST00000583821 INSRP06213 1382 aa11.28□□□□□ -0.6
MSI2-218ENST00000583821 FLT4P35916 1363 aa11.28□□□□□ -0.6
MSI2-218ENST00000583821 C4BP0C0L5 1744 aa11.28□□□□□ -0.6
MSI2-218ENST00000583821 SLC27A3Q5K4L6 730 aa11.27□□□□□ -0.61
MSI2-218ENST00000583821 MAP3K5Q99683 1374 aa11.27□□□□□ -0.61
MSI2-218ENST00000583821 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
MSI2-218ENST00000583821 RAPGEF4Q8WZA2 1011 aa11.26□□□□□ -0.61
MSI2-218ENST00000583821 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
MSI2-218ENST00000583821 TFCP2L1Q9NZI6 479 aa11.26□□□□□ -0.61
MSI2-218ENST00000583821 CCNL1Q9UK58 526 aaPredicted RBP11.26□□□□□ -0.61
MSI2-218ENST00000583821 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
MSI2-218ENST00000583821 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
MSI2-218ENST00000583821 CHRM1P11229 460 aaPredicted RBP11.25□□□□□ -0.61
MSI2-218ENST00000583821 TATP17735 454 aaPredicted RBP11.25□□□□□ -0.61
MSI2-218ENST00000583821 PCDH11XQ9BZA7 1347 aa11.25□□□□□ -0.61
MSI2-218ENST00000583821 PCDH11YQ9BZA8 1340 aa11.25□□□□□ -0.61
MSI2-218ENST00000583821 CYP27B1O15528 508 aa11.24□□□□□ -0.61
MSI2-218ENST00000583821 MSL1Q68DK7 614 aa11.24□□□□□ -0.61
MSI2-218ENST00000583821 NLGN2Q8NFZ4 835 aa11.24□□□□□ -0.61
MSI2-218ENST00000583821 POLR3GLQ9BT43 218 aa11.24□□□□□ -0.61
MSI2-218ENST00000583821 CGNL1Q0VF96 1302 aa11.24□□□□□ -0.61
MSI2-218ENST00000583821 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
MSI2-218ENST00000583821 PALLDQ8WX93 1383 aa11.24□□□□□ -0.61
MSI2-218ENST00000583821 PPM1GO15355 546 aaPredicted RBP11.23□□□□□ -0.61
MSI2-218ENST00000583821 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
MSI2-218ENST00000583821 PCGF6Q9BYE7 350 aa11.23□□□□□ -0.61
MSI2-218ENST00000583821 POLD1P28340 1107 aa11.22□□□□□ -0.61
MSI2-218ENST00000583821 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
MSI2-218ENST00000583821 COL23A1Q86Y22 540 aaPredicted RBP11.22□□□□□ -0.61
MSI2-218ENST00000583821 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
MSI2-218ENST00000583821 ZNF784Q8NCA9 323 aaPredicted RBP11.22□□□□□ -0.61
MSI2-218ENST00000583821 VIRMAQ69YN4 1812 aaKnown RBP11.21□□□□□ -0.61
MSI2-218ENST00000583821 RGL2O15211 777 aa11.21□□□□□ -0.61
MSI2-218ENST00000583821 TNNT2P45379 298 aaPredicted RBP11.21□□□□□ -0.61
MSI2-218ENST00000583821 SMIM5Q71RC9 77 aa11.21□□□□□ -0.61
MSI2-218ENST00000583821 AMIGO3Q86WK7 504 aa11.21□□□□□ -0.61
MSI2-218ENST00000583821 SLC16A10Q8TF71 515 aa11.21□□□□□ -0.61
MSI2-218ENST00000583821 CEP350Q5VT06 3117 aa11.21□□□□□ -0.62
MSI2-218ENST00000583821 COL5A3P25940 1745 aaPredicted RBP11.21□□□□□ -0.62
MSI2-218ENST00000583821 GPR162Q16538 588 aa11.2□□□□□ -0.62
MSI2-218ENST00000583821 DCBLD2Q96PD2 775 aa11.2□□□□□ -0.62
MSI2-218ENST00000583821 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
MSI2-218ENST00000583821 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
MSI2-218ENST00000583821 EYA1Q99502 592 aa11.19□□□□□ -0.62
MSI2-218ENST00000583821 POLKQ9UBT6 870 aa11.19□□□□□ -0.62
MSI2-218ENST00000583821 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
MSI2-218ENST00000583821 WASHC2AQ641Q2 1341 aa11.18□□□□□ -0.62
MSI2-218ENST00000583821 HSPA5P11021 654 aaKnown RBP11.18□□□□□ -0.62
MSI2-218ENST00000583821 CLCN6P51797 869 aa11.18□□□□□ -0.62
MSI2-218ENST00000583821 PIGBQ92521 554 aa11.18□□□□□ -0.62
MSI2-218ENST00000583821 KIAA1551Q9HCM1 1747 aa11.18□□□□□ -0.62
MSI2-218ENST00000583821 PHF14O94880 888 aa11.17□□□□□ -0.62
MSI2-218ENST00000583821 YBX3P16989 372 aaKnown RBP eCLIP11.17□□□□□ -0.62
MSI2-218ENST00000583821 ATN1P54259 1190 aaPredicted RBP11.17□□□□□ -0.62
MSI2-218ENST00000583821 EIF4A2Q14240 407 aaKnown RBP11.17□□□□□ -0.62
MSI2-218ENST00000583821 N4BP2Q86UW6 1770 aaPredicted RBP11.16□□□□□ -0.62
MSI2-218ENST00000583821 MYH14Q7Z406 1995 aaKnown RBP11.16□□□□□ -0.62
MSI2-218ENST00000583821 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
MSI2-218ENST00000583821 LINC00116Q8NCU8 138 aa11.16□□□□□ -0.62
MSI2-218ENST00000583821 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
MSI2-218ENST00000583821 SPG7Q9UQ90 795 aa11.16□□□□□ -0.62
MSI2-218ENST00000583821 ZNF831Q5JPB2 1677 aa11.16□□□□□ -0.62
MSI2-218ENST00000583821 SCN11AQ9UI33 1791 aa11.16□□□□□ -0.62
MSI2-218ENST00000583821 TJP1Q07157 1748 aa11.15□□□□□ -0.62
MSI2-218ENST00000583821 CLSPNQ9HAW4 1339 aa11.15□□□□□ -0.62
MSI2-218ENST00000583821 KIF13BQ9NQT8 1826 aa11.15□□□□□ -0.62
MSI2-218ENST00000583821 TTLL13PA6NNM8 815 aa11.15□□□□□ -0.62
MSI2-218ENST00000583821 PHKG2P15735 406 aa11.15□□□□□ -0.62
MSI2-218ENST00000583821 ITPK1Q13572 414 aa11.15□□□□□ -0.62
MSI2-218ENST00000583821 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
MSI2-218ENST00000583821 AK7Q96M32 723 aa11.15□□□□□ -0.62
MSI2-218ENST00000583821 TMEM106CQ9BVX2 250 aa11.15□□□□□ -0.62
MSI2-218ENST00000583821 ASAP1Q9ULH1 1129 aa11.15□□□□□ -0.62
MSI2-218ENST00000583821 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
MSI2-218ENST00000583821 PANK3Q9H999 370 aa11.14□□□□□ -0.63
MSI2-218ENST00000583821 TMOD3Q9NYL9 352 aa11.14□□□□□ -0.63
MSI2-218ENST00000583821 KDM6AO15550 1401 aaPredicted RBP11.14□□□□□ -0.63
MSI2-218ENST00000583821 KDRP35968 1356 aa11.14□□□□□ -0.63
MSI2-218ENST00000583821 IGSF1Q8N6C5 1336 aa11.13□□□□□ -0.63
MSI2-218ENST00000583821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
MSI2-218ENST00000583821 LOC102724428A0A0B4J2F2 783 aa11.13□□□□□ -0.63
MSI2-218ENST00000583821 SIK1P57059 783 aa11.13□□□□□ -0.63
MSI2-218ENST00000583821 EIF4G2P78344 907 aaKnown RBP eCLIP11.13□□□□□ -0.63
MSI2-218ENST00000583821 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
MSI2-218ENST00000583821 ZNF467Q7Z7K2 595 aaPredicted RBP11.13□□□□□ -0.63
MSI2-218ENST00000583821 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
MSI2-218ENST00000583821 CICQ96RK0 1608 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms