RNA–Protein interactions for RNA: ENST00000583092.1

PPP4R1-224, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-224ENST00000583092 SHANK3Q9BYB0 1731 aa13.91□□□□□ -0.18
PPP4R1-224ENST00000583092 ADRA2BP18089 450 aa13.91□□□□□ -0.18
PPP4R1-224ENST00000583092 RFC4P35249 363 aa13.91□□□□□ -0.18
PPP4R1-224ENST00000583092 RC3H1Q5TC82 1133 aaKnown RBP13.91□□□□□ -0.18
PPP4R1-224ENST00000583092 CHD4Q14839 1912 aa13.91□□□□□ -0.18
PPP4R1-224ENST00000583092 C1QTNF8P60827 252 aa13.9□□□□□ -0.18
PPP4R1-224ENST00000583092 ITPK1Q13572 414 aa13.9□□□□□ -0.18
PPP4R1-224ENST00000583092 YBX3P16989 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
PPP4R1-224ENST00000583092 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
PPP4R1-224ENST00000583092 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
PPP4R1-224ENST00000583092 RPS6KA4O75676 772 aa13.88□□□□□ -0.19
PPP4R1-224ENST00000583092 MMP10P09238 476 aa13.88□□□□□ -0.19
PPP4R1-224ENST00000583092 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
PPP4R1-224ENST00000583092 PARP3Q9Y6F1 533 aa13.88□□□□□ -0.19
PPP4R1-224ENST00000583092 PKD1L3Q7Z443 1732 aa13.87□□□□□ -0.19
PPP4R1-224ENST00000583092 IL13P35225 146 aa13.87□□□□□ -0.19
PPP4R1-224ENST00000583092 AKAP4Q5JQC9 854 aa13.87□□□□□ -0.19
PPP4R1-224ENST00000583092 SMIM5Q71RC9 77 aa13.87□□□□□ -0.19
PPP4R1-224ENST00000583092 CCDC87Q9NVE4 849 aa13.87□□□□□ -0.19
PPP4R1-224ENST00000583092 C5P01031 1676 aa13.87□□□□□ -0.19
PPP4R1-224ENST00000583092 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
PPP4R1-224ENST00000583092 ITGB4P16144 1822 aa13.86□□□□□ -0.19
PPP4R1-224ENST00000583092 TGFB2P61812 414 aa13.86□□□□□ -0.19
PPP4R1-224ENST00000583092 AEBP1Q8IUX7 1158 aa13.86□□□□□ -0.19
PPP4R1-224ENST00000583092 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
PPP4R1-224ENST00000583092 GPBP1L1Q9HC44 474 aaPredicted RBP13.86□□□□□ -0.19
PPP4R1-224ENST00000583092 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
PPP4R1-224ENST00000583092 DIAPH1O60610 1272 aaKnown RBP13.85□□□□□ -0.19
PPP4R1-224ENST00000583092 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
PPP4R1-224ENST00000583092 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
PPP4R1-224ENST00000583092 AMIGO3Q86WK7 504 aa13.84□□□□□ -0.19
PPP4R1-224ENST00000583092 WWC3Q9ULE0 1092 aa13.84□□□□□ -0.19
PPP4R1-224ENST00000583092 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
PPP4R1-224ENST00000583092 KIF7Q2M1P5 1343 aa13.84□□□□□ -0.19
PPP4R1-224ENST00000583092 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
PPP4R1-224ENST00000583092 ZPR1O75312 459 aa13.83□□□□□ -0.2
PPP4R1-224ENST00000583092 COL24A1Q17RW2 1714 aa13.83□□□□□ -0.2
PPP4R1-224ENST00000583092 TAF1LQ8IZX4 1826 aa13.83□□□□□ -0.2
PPP4R1-224ENST00000583092 HMOX1P09601 288 aa13.82□□□□□ -0.2
PPP4R1-224ENST00000583092 CRKLP46109 303 aaKnown RBP13.82□□□□□ -0.2
PPP4R1-224ENST00000583092 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
PPP4R1-224ENST00000583092 SLC52A2Q9HAB3 445 aa13.82□□□□□ -0.2
PPP4R1-224ENST00000583092 BCS1LQ9Y276 419 aa13.82□□□□□ -0.2
PPP4R1-224ENST00000583092 U2SURPO15042 1029 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-224ENST00000583092 RNMTO43148 476 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-224ENST00000583092 GYS1P13807 737 aa13.81□□□□□ -0.2
PPP4R1-224ENST00000583092 NPM2Q86SE8 214 aaKnown RBP13.81□□□□□ -0.2
PPP4R1-224ENST00000583092 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
PPP4R1-224ENST00000583092 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
PPP4R1-224ENST00000583092 SLC4A9Q96Q91 983 aa13.81□□□□□ -0.2
PPP4R1-224ENST00000583092 TOGARAM1Q9Y4F4 1720 aa13.81□□□□□ -0.2
PPP4R1-224ENST00000583092 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
PPP4R1-224ENST00000583092 FCHSD2O94868 740 aa13.8□□□□□ -0.2
PPP4R1-224ENST00000583092 ARHGAP27Q6ZUM4 889 aa13.8□□□□□ -0.2
PPP4R1-224ENST00000583092 ZNF526Q8TF50 670 aaPredicted RBP13.8□□□□□ -0.2
PPP4R1-224ENST00000583092 KDRP35968 1356 aa13.8□□□□□ -0.2
PPP4R1-224ENST00000583092 GAS2L2Q8NHY3 880 aa13.79□□□□□ -0.2
PPP4R1-224ENST00000583092 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
PPP4R1-224ENST00000583092 KDM6AO15550 1401 aaPredicted RBP13.79□□□□□ -0.2
PPP4R1-224ENST00000583092 ATP10DQ9P241 1426 aa13.79□□□□□ -0.2
PPP4R1-224ENST00000583092 UBR3Q6ZT12 1888 aa13.78□□□□□ -0.2
PPP4R1-224ENST00000583092 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
PPP4R1-224ENST00000583092 STARD3NLO95772 234 aa13.78□□□□□ -0.2
PPP4R1-224ENST00000583092 TEFQ10587 303 aa13.78□□□□□ -0.2
PPP4R1-224ENST00000583092 LGR6Q9HBX8 967 aa13.78□□□□□ -0.2
PPP4R1-224ENST00000583092 PIM2Q9P1W9 311 aa13.78□□□□□ -0.2
PPP4R1-224ENST00000583092 DPEP1P16444 411 aa13.77□□□□□ -0.21
PPP4R1-224ENST00000583092 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
PPP4R1-224ENST00000583092 DNAJC10Q8IXB1 793 aa13.77□□□□□ -0.21
PPP4R1-224ENST00000583092 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.21
PPP4R1-224ENST00000583092 A0A087WZG4 1122 aa13.76□□□□□ -0.21
PPP4R1-224ENST00000583092 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
PPP4R1-224ENST00000583092 DALRD3Q5D0E6 543 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-224ENST00000583092 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
PPP4R1-224ENST00000583092 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
PPP4R1-224ENST00000583092 GNAT3A8MTJ3 354 aa13.75□□□□□ -0.21
PPP4R1-224ENST00000583092 INTS5Q6P9B9 1019 aaKnown RBP13.75□□□□□ -0.21
PPP4R1-224ENST00000583092 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
PPP4R1-224ENST00000583092 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
PPP4R1-224ENST00000583092 NEFMP07197 916 aa13.74□□□□□ -0.21
PPP4R1-224ENST00000583092 CYP19A1P11511 503 aaPredicted RBP13.74□□□□□ -0.21
PPP4R1-224ENST00000583092 FKBP8Q14318 412 aa13.74□□□□□ -0.21
PPP4R1-224ENST00000583092 USPL1Q5W0Q7 1092 aa13.74□□□□□ -0.21
PPP4R1-224ENST00000583092 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
PPP4R1-224ENST00000583092 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
PPP4R1-224ENST00000583092 NARFQ9UHQ1 456 aa13.73□□□□□ -0.21
PPP4R1-224ENST00000583092 UTRNP46939 3433 aa13.73□□□□□ -0.21
PPP4R1-224ENST00000583092 C16orf71Q8IYS4 520 aaPredicted RBP13.72□□□□□ -0.21
PPP4R1-224ENST00000583092 ZNF831Q5JPB2 1677 aa13.72□□□□□ -0.21
PPP4R1-224ENST00000583092 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
PPP4R1-224ENST00000583092 NPHP1O15259 732 aa13.71□□□□□ -0.21
PPP4R1-224ENST00000583092 TM4SF1P30408 202 aa13.71□□□□□ -0.21
PPP4R1-224ENST00000583092 PXDNLA1KZ92 1463 aa13.71□□□□□ -0.21
PPP4R1-224ENST00000583092 C10orf71Q711Q0 1435 aa13.71□□□□□ -0.22
PPP4R1-224ENST00000583092 CICQ96RK0 1608 aaPredicted RBP13.71□□□□□ -0.22
PPP4R1-224ENST00000583092 POLRMTO00411 1230 aaKnown RBP13.7□□□□□ -0.22
PPP4R1-224ENST00000583092 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
PPP4R1-224ENST00000583092 HSPA6P17066 643 aa13.7□□□□□ -0.22
PPP4R1-224ENST00000583092 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
PPP4R1-224ENST00000583092 ZNF790Q6PG37 636 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms