RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
GGA3-214ENST00000582717 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
GGA3-214ENST00000582717 ARHGEF25Q86VW2 580 aa16.88■□□□□ 0.29
GGA3-214ENST00000582717 LRRC59Q96AG4 307 aaKnown RBP16.88■□□□□ 0.29
GGA3-214ENST00000582717 PTPRCP08575 1304 aa16.88■□□□□ 0.29
GGA3-214ENST00000582717 TMEM94Q12767 1356 aa16.88■□□□□ 0.29
GGA3-214ENST00000582717 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
GGA3-214ENST00000582717 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
GGA3-214ENST00000582717 MST1RQ04912 1400 aa16.87■□□□□ 0.29
GGA3-214ENST00000582717 ALS2Q96Q42 1657 aa16.87■□□□□ 0.29
GGA3-214ENST00000582717 ESPNB1AK53 854 aa16.87■□□□□ 0.29
GGA3-214ENST00000582717 GLIPR1L2Q4G1C9 344 aa16.87■□□□□ 0.29
GGA3-214ENST00000582717 TNPO1Q92973 898 aaKnown RBP16.87■□□□□ 0.29
GGA3-214ENST00000582717 G2E3Q7L622 706 aa16.86■□□□□ 0.29
GGA3-214ENST00000582717 LNPKQ9C0E8 428 aa16.86■□□□□ 0.29
GGA3-214ENST00000582717 GCC1Q96CN9 775 aa16.85■□□□□ 0.29
GGA3-214ENST00000582717 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
GGA3-214ENST00000582717 NCAPD2Q15021 1401 aa16.84■□□□□ 0.29
GGA3-214ENST00000582717 LMO7Q8WWI1 1683 aa16.84■□□□□ 0.29
GGA3-214ENST00000582717 HSPA2P54652 639 aa16.84■□□□□ 0.29
GGA3-214ENST00000582717 TAF7Q15545 349 aaPredicted RBP16.84■□□□□ 0.29
GGA3-214ENST00000582717 RGPD5Q99666 1765 aa16.84■□□□□ 0.29
GGA3-214ENST00000582717 ATP10DQ9P241 1426 aa16.84■□□□□ 0.29
GGA3-214ENST00000582717 CAMTA1Q9Y6Y1 1673 aa16.84■□□□□ 0.29
GGA3-214ENST00000582717 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
GGA3-214ENST00000582717 HSP90AA1P07900 732 aaKnown RBP16.84■□□□□ 0.29
GGA3-214ENST00000582717 TRIM44Q96DX7 344 aaPredicted RBP16.84■□□□□ 0.29
GGA3-214ENST00000582717 RRP9O43818 475 aaKnown RBP16.83■□□□□ 0.28
GGA3-214ENST00000582717 ATF3P18847 181 aa16.83■□□□□ 0.28
GGA3-214ENST00000582717 DCCP43146 1447 aa16.83■□□□□ 0.28
GGA3-214ENST00000582717 ANKRD24Q8TF21 1146 aa16.82■□□□□ 0.28
GGA3-214ENST00000582717 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
GGA3-214ENST00000582717 ANKRD45Q5TZF3 282 aa16.82■□□□□ 0.28
GGA3-214ENST00000582717 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
GGA3-214ENST00000582717 BABAM1Q9NWV8 329 aa16.82■□□□□ 0.28
GGA3-214ENST00000582717 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
GGA3-214ENST00000582717 PXDNQ92626 1479 aa16.82■□□□□ 0.28
GGA3-214ENST00000582717 F6X3S4 739 aa16.81■□□□□ 0.28
GGA3-214ENST00000582717 K7ELQ4 463 aaPredicted RBP16.81■□□□□ 0.28
GGA3-214ENST00000582717 KIF2CQ99661 725 aa16.81■□□□□ 0.28
GGA3-214ENST00000582717 LGR6Q9HBX8 967 aa16.81■□□□□ 0.28
GGA3-214ENST00000582717 GOLGA6L22H0YM25 854 aa16.81■□□□□ 0.28
GGA3-214ENST00000582717 MEIS3Q99687 375 aa16.81■□□□□ 0.28
GGA3-214ENST00000582717 KDM3BQ7LBC6 1761 aa16.81■□□□□ 0.28
GGA3-214ENST00000582717 IBTKQ9P2D0 1353 aaPredicted RBP16.81■□□□□ 0.28
GGA3-214ENST00000582717 NECTIN2Q92692 538 aa16.8■□□□□ 0.28
GGA3-214ENST00000582717 STK31Q9BXU1 1019 aa16.8■□□□□ 0.28
GGA3-214ENST00000582717 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
GGA3-214ENST00000582717 CACNA1FO60840 1977 aa16.79■□□□□ 0.28
GGA3-214ENST00000582717 CCDC30Q5VVM6 783 aa16.79■□□□□ 0.28
GGA3-214ENST00000582717 XIRP1Q702N8 1843 aaKnown RBP16.79■□□□□ 0.28
GGA3-214ENST00000582717 ANKRD44Q8N8A2 993 aa16.79■□□□□ 0.28
GGA3-214ENST00000582717 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
GGA3-214ENST00000582717 ZC3H6P61129 1189 aaKnown RBP16.78■□□□□ 0.28
GGA3-214ENST00000582717 CCDC173Q0VFZ6 552 aa16.78■□□□□ 0.28
GGA3-214ENST00000582717 PLEKHO1Q53GL0 409 aaPredicted RBP16.78■□□□□ 0.28
GGA3-214ENST00000582717 CEP85Q6P2H3 762 aa16.78■□□□□ 0.28
GGA3-214ENST00000582717 SLC4A10Q6U841 1118 aa16.78■□□□□ 0.28
GGA3-214ENST00000582717 GAS2L3Q86XJ1 694 aa16.78■□□□□ 0.28
GGA3-214ENST00000582717 FLIIQ13045 1269 aa16.77■□□□□ 0.28
GGA3-214ENST00000582717 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
GGA3-214ENST00000582717 AKAP4Q5JQC9 854 aa16.77■□□□□ 0.28
GGA3-214ENST00000582717 ERBB4Q15303 1308 aa16.77■□□□□ 0.28
GGA3-214ENST00000582717 TBC1D9Q6ZT07 1266 aa16.77■□□□□ 0.27
GGA3-214ENST00000582717 DCTPP1Q9H773 170 aa16.77■□□□□ 0.27
GGA3-214ENST00000582717 N4BP2Q86UW6 1770 aaPredicted RBP16.77■□□□□ 0.27
GGA3-214ENST00000582717 TPM2P07951 284 aa16.76■□□□□ 0.27
GGA3-214ENST00000582717 CCT4P50991 539 aaKnown RBP16.76■□□□□ 0.27
GGA3-214ENST00000582717 MPRIPQ6WCQ1 1025 aa16.76■□□□□ 0.27
GGA3-214ENST00000582717 CDC45O75419 566 aa16.76■□□□□ 0.27
GGA3-214ENST00000582717 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
GGA3-214ENST00000582717 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
GGA3-214ENST00000582717 PPP1R9BQ96SB3 815 aa16.76■□□□□ 0.27
GGA3-214ENST00000582717 ERBB3P21860 1342 aa16.76■□□□□ 0.27
GGA3-214ENST00000582717 KCNQ3O43525 872 aa16.75■□□□□ 0.27
GGA3-214ENST00000582717 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
GGA3-214ENST00000582717 FKBP5Q13451 457 aaPredicted RBP16.75■□□□□ 0.27
GGA3-214ENST00000582717 KLHL40Q2TBA0 621 aa16.75■□□□□ 0.27
GGA3-214ENST00000582717 CADPS2Q86UW7 1296 aa16.75■□□□□ 0.27
GGA3-214ENST00000582717 COL18A1P39060 1754 aa16.75■□□□□ 0.27
GGA3-214ENST00000582717 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
GGA3-214ENST00000582717 ANP32BQ92688 251 aaKnown RBP16.75■□□□□ 0.27
GGA3-214ENST00000582717 CRYBG1Q9Y4K1 1723 aa16.74■□□□□ 0.27
GGA3-214ENST00000582717 TNS3Q68CZ2 1445 aa16.74■□□□□ 0.27
GGA3-214ENST00000582717 STRCQ7RTU9 1775 aa16.73■□□□□ 0.27
GGA3-214ENST00000582717 RNMTO43148 476 aaKnown RBP16.73■□□□□ 0.27
GGA3-214ENST00000582717 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
GGA3-214ENST00000582717 CD2BP2O95400 341 aaKnown RBP16.73■□□□□ 0.27
GGA3-214ENST00000582717 TEFQ10587 303 aa16.73■□□□□ 0.27
GGA3-214ENST00000582717 RABEP1Q15276 862 aa16.73■□□□□ 0.27
GGA3-214ENST00000582717 C1orf141Q5JVX7 400 aa16.73■□□□□ 0.27
GGA3-214ENST00000582717 CABLES1Q8TDN4 633 aa16.73■□□□□ 0.27
GGA3-214ENST00000582717 OVOS2A0A0G2JMS6 1433 aa16.72■□□□□ 0.27
GGA3-214ENST00000582717 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
GGA3-214ENST00000582717 SIPA1L3O60292 1781 aaPredicted RBP16.72■□□□□ 0.27
GGA3-214ENST00000582717 NASPP49321 788 aaPredicted RBP16.72■□□□□ 0.27
GGA3-214ENST00000582717 ADAMTS7Q9UKP4 1686 aa16.71■□□□□ 0.27
GGA3-214ENST00000582717 PXDNLA1KZ92 1463 aa16.71■□□□□ 0.27
GGA3-214ENST00000582717 BTBD11A6QL63 1104 aa16.71■□□□□ 0.27
GGA3-214ENST00000582717 SSFA2P28290 1259 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms