RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 PLSCR1O15162 318 aa20.98■□□□□ 0.95
CCDC57-213ENST00000581625 RRP7AQ9Y3A4 280 aaKnown RBP20.98■□□□□ 0.95
CCDC57-213ENST00000581625 MCM10Q7L590 875 aa20.97■□□□□ 0.95
CCDC57-213ENST00000581625 NGEFQ8N5V2 710 aa20.97■□□□□ 0.95
CCDC57-213ENST00000581625 SMARCC1Q92922 1105 aaPredicted RBP20.97■□□□□ 0.95
CCDC57-213ENST00000581625 NEUROD2Q15784 382 aa20.96■□□□□ 0.95
CCDC57-213ENST00000581625 NFATC2IPQ8NCF5 419 aa20.96■□□□□ 0.95
CCDC57-213ENST00000581625 KAT6BQ8WYB5 2073 aa20.96■□□□□ 0.95
CCDC57-213ENST00000581625 PALLDQ8WX93 1383 aa20.96■□□□□ 0.95
CCDC57-213ENST00000581625 DCTN1Q14203 1278 aa20.95■□□□□ 0.94
CCDC57-213ENST00000581625 LY75O60449 1722 aa20.95■□□□□ 0.94
CCDC57-213ENST00000581625 RREB1Q92766 1687 aa20.94■□□□□ 0.94
CCDC57-213ENST00000581625 CCDC27Q2M243 656 aa20.94■□□□□ 0.94
CCDC57-213ENST00000581625 TRIM35Q9UPQ4 493 aa20.94■□□□□ 0.94
CCDC57-213ENST00000581625 CALD1Q05682 793 aaKnown RBP20.92■□□□□ 0.94
CCDC57-213ENST00000581625 DEFB132Q7Z7B7 95 aa20.92■□□□□ 0.94
CCDC57-213ENST00000581625 CAMKK2Q96RR4 588 aa20.92■□□□□ 0.94
CCDC57-213ENST00000581625 EN1Q05925 392 aaPredicted RBP20.91■□□□□ 0.94
CCDC57-213ENST00000581625 ZNF831Q5JPB2 1677 aa20.91■□□□□ 0.94
CCDC57-213ENST00000581625 ATG3Q9NT62 314 aa20.91■□□□□ 0.94
CCDC57-213ENST00000581625 ASAP1Q9ULH1 1129 aa20.91■□□□□ 0.94
CCDC57-213ENST00000581625 UBR2Q8IWV8 1755 aa20.9■□□□□ 0.94
CCDC57-213ENST00000581625 CICQ96RK0 1608 aaPredicted RBP20.9■□□□□ 0.94
CCDC57-213ENST00000581625 HMGB2P26583 209 aaKnown RBP20.9■□□□□ 0.94
CCDC57-213ENST00000581625 TAF7Q15545 349 aaPredicted RBP20.9■□□□□ 0.94
CCDC57-213ENST00000581625 SLC27A3Q5K4L6 730 aa20.9■□□□□ 0.94
CCDC57-213ENST00000581625 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
CCDC57-213ENST00000581625 BTBD11A6QL63 1104 aa20.89■□□□□ 0.93
CCDC57-213ENST00000581625 TTC5Q8N0Z6 440 aa20.89■□□□□ 0.93
CCDC57-213ENST00000581625 BABAM1Q9NWV8 329 aa20.89■□□□□ 0.93
CCDC57-213ENST00000581625 KCPQ6ZWJ8 1503 aa20.88■□□□□ 0.93
CCDC57-213ENST00000581625 KDM3BQ7LBC6 1761 aa20.88■□□□□ 0.93
CCDC57-213ENST00000581625 NUP188Q5SRE5 1749 aa20.88■□□□□ 0.93
CCDC57-213ENST00000581625 EZH2Q15910 746 aaKnown RBP20.88■□□□□ 0.93
CCDC57-213ENST00000581625 TXNRD1Q16881 649 aa20.88■□□□□ 0.93
CCDC57-213ENST00000581625 ZNF790Q6PG37 636 aa20.87■□□□□ 0.93
CCDC57-213ENST00000581625 WWC1Q8IX03 1113 aa20.87■□□□□ 0.93
CCDC57-213ENST00000581625 LOC102724428A0A0B4J2F2 783 aa20.86■□□□□ 0.93
CCDC57-213ENST00000581625 SIK1P57059 783 aa20.86■□□□□ 0.93
CCDC57-213ENST00000581625 CCNL1Q9UK58 526 aaPredicted RBP20.86■□□□□ 0.93
CCDC57-213ENST00000581625 SLC39A6Q13433 755 aa20.85■□□□□ 0.93
CCDC57-213ENST00000581625 C5P01031 1676 aa20.84■□□□□ 0.93
CCDC57-213ENST00000581625 IL16Q14005 1332 aa20.83■□□□□ 0.93
CCDC57-213ENST00000581625 PTCD1O75127 700 aaKnown RBP20.83■□□□□ 0.93
CCDC57-213ENST00000581625 VSIG10Q8N0Z9 540 aa20.83■□□□□ 0.93
CCDC57-213ENST00000581625 PROM2Q8N271 834 aa20.83■□□□□ 0.93
CCDC57-213ENST00000581625 CFAP44Q96MT7 982 aa20.83■□□□□ 0.93
CCDC57-213ENST00000581625 FMNL2Q96PY5 1086 aa20.83■□□□□ 0.93
CCDC57-213ENST00000581625 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.93
CCDC57-213ENST00000581625 IFT57Q9NWB7 429 aa20.83■□□□□ 0.93
CCDC57-213ENST00000581625 TSPYL4Q9UJ04 414 aa20.83■□□□□ 0.93
CCDC57-213ENST00000581625 GNAI1P63096 354 aa20.82■□□□□ 0.92
CCDC57-213ENST00000581625 WDR63Q8IWG1 891 aa20.82■□□□□ 0.92
CCDC57-213ENST00000581625 HEG1Q9ULI3 1381 aa20.82■□□□□ 0.92
CCDC57-213ENST00000581625 TJP1Q07157 1748 aa20.81■□□□□ 0.92
CCDC57-213ENST00000581625 SENP3-EIF4A1A0A087X0R7 540 aa20.81■□□□□ 0.92
CCDC57-213ENST00000581625 CHL1O00533 1208 aa20.81■□□□□ 0.92
CCDC57-213ENST00000581625 ATP6V1AP38606 617 aa20.81■□□□□ 0.92
CCDC57-213ENST00000581625 LRRC4BQ9NT99 713 aa20.81■□□□□ 0.92
CCDC57-213ENST00000581625 SALL2Q9Y467 1007 aaPredicted RBP20.81■□□□□ 0.92
CCDC57-213ENST00000581625 TAF1LQ8IZX4 1826 aa20.81■□□□□ 0.92
CCDC57-213ENST00000581625 ZNF496Q96IT1 587 aaPredicted RBP20.8■□□□□ 0.92
CCDC57-213ENST00000581625 COL5A3P25940 1745 aaPredicted RBP20.8■□□□□ 0.92
CCDC57-213ENST00000581625 ZNF521Q96K83 1311 aa20.79■□□□□ 0.92
CCDC57-213ENST00000581625 ZNF853P0CG23 659 aa20.79■□□□□ 0.92
CCDC57-213ENST00000581625 C4BP0C0L5 1744 aa20.78■□□□□ 0.92
CCDC57-213ENST00000581625 SLC4A9Q96Q91 983 aa20.78■□□□□ 0.92
CCDC57-213ENST00000581625 MIS18AQ9NYP9 233 aa20.78■□□□□ 0.92
CCDC57-213ENST00000581625 LAS1LQ9Y4W2 734 aaKnown RBP20.78■□□□□ 0.92
CCDC57-213ENST00000581625 KCNQ3O43525 872 aa20.77■□□□□ 0.92
CCDC57-213ENST00000581625 NBPF14Q5TI25 921 aa20.77■□□□□ 0.92
CCDC57-213ENST00000581625 TEX13AQ9BXU3 409 aaPredicted RBP20.77■□□□□ 0.92
CCDC57-213ENST00000581625 LAMB4A4D0S4 1761 aa20.77■□□□□ 0.91
CCDC57-213ENST00000581625 EIF4A1P60842 406 aaKnown RBP20.76■□□□□ 0.91
CCDC57-213ENST00000581625 HNRNPUQ00839 825 aaKnown RBP eCLIP20.76■□□□□ 0.91
CCDC57-213ENST00000581625 ITPK1Q13572 414 aa20.76■□□□□ 0.91
CCDC57-213ENST00000581625 MBIPQ9NS73 344 aa20.76■□□□□ 0.91
CCDC57-213ENST00000581625 SNRPA1P09661 255 aaKnown RBP20.75■□□□□ 0.91
CCDC57-213ENST00000581625 KCNQ4P56696 695 aa20.75■□□□□ 0.91
CCDC57-213ENST00000581625 CNTNAP4Q9C0A0 1308 aa20.75■□□□□ 0.91
CCDC57-213ENST00000581625 LINC00116Q8NCU8 138 aa20.74■□□□□ 0.91
CCDC57-213ENST00000581625 STK32BQ9NY57 414 aa20.74■□□□□ 0.91
CCDC57-213ENST00000581625 GOLGA2Q08379 1002 aa20.73■□□□□ 0.91
CCDC57-213ENST00000581625 DNAJC10Q8IXB1 793 aa20.73■□□□□ 0.91
CCDC57-213ENST00000581625 AK7Q96M32 723 aa20.73■□□□□ 0.91
CCDC57-213ENST00000581625 MYH16Q9H6N6 1097 aa20.73■□□□□ 0.91
CCDC57-213ENST00000581625 ANO8Q9HCE9 1232 aaPredicted RBP20.73■□□□□ 0.91
CCDC57-213ENST00000581625 STARD3NLO95772 234 aa20.72■□□□□ 0.91
CCDC57-213ENST00000581625 AKT1S1Q96B36 256 aa20.72■□□□□ 0.91
CCDC57-213ENST00000581625 QSER1Q2KHR3 1735 aa20.72■□□□□ 0.91
CCDC57-213ENST00000581625 GIGYF1O75420 1035 aaPredicted RBP20.71■□□□□ 0.91
CCDC57-213ENST00000581625 HOXB7P09629 217 aa20.71■□□□□ 0.91
CCDC57-213ENST00000581625 SLC15A2Q16348 729 aa20.71■□□□□ 0.91
CCDC57-213ENST00000581625 RC3H1Q5TC82 1133 aaKnown RBP20.71■□□□□ 0.91
CCDC57-213ENST00000581625 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
CCDC57-213ENST00000581625 ZBED9Q6R2W3 1325 aa20.71■□□□□ 0.91
CCDC57-213ENST00000581625 FANCIQ9NVI1 1328 aa20.71■□□□□ 0.91
CCDC57-213ENST00000581625 E9PSI1 815 aa20.7■□□□□ 0.9
CCDC57-213ENST00000581625 CYP19A1P11511 503 aaPredicted RBP20.7■□□□□ 0.9
CCDC57-213ENST00000581625 CRKLP46109 303 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 238 ms