RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 FCHSD2O94868 740 aa11.48□□□□□ -0.57
SRSF1-203ENST00000581497 WAPLQ7Z5K2 1190 aa11.48□□□□□ -0.57
SRSF1-203ENST00000581497 C14orf93Q9H972 538 aaKnown RBP11.48□□□□□ -0.57
SRSF1-203ENST00000581497 PNPLA6Q8IY17 1366 aa11.48□□□□□ -0.57
SRSF1-203ENST00000581497 SHPRHQ149N8 1683 aa11.48□□□□□ -0.57
SRSF1-203ENST00000581497 SOS2Q07890 1332 aaPredicted RBP11.47□□□□□ -0.57
SRSF1-203ENST00000581497 ESCO1Q5FWF5 840 aa11.47□□□□□ -0.57
SRSF1-203ENST00000581497 SCUBE3Q8IX30 993 aa11.47□□□□□ -0.57
SRSF1-203ENST00000581497 SIRT1Q96EB6 747 aa11.47□□□□□ -0.57
SRSF1-203ENST00000581497 RTN4Q9NQC3 1192 aaKnown RBP11.47□□□□□ -0.57
SRSF1-203ENST00000581497 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.57
SRSF1-203ENST00000581497 YTHDC2Q9H6S0 1430 aaKnown RBP11.46□□□□□ -0.57
SRSF1-203ENST00000581497 DHX57Q6P158 1386 aaKnown RBP11.46□□□□□ -0.57
SRSF1-203ENST00000581497 NPHP3Q7Z494 1330 aa11.46□□□□□ -0.57
SRSF1-203ENST00000581497 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
SRSF1-203ENST00000581497 AFF2P51816 1311 aa11.45□□□□□ -0.58
SRSF1-203ENST00000581497 CFAP70Q5T0N1 1121 aa11.45□□□□□ -0.58
SRSF1-203ENST00000581497 PXYLP1Q8TE99 480 aa11.45□□□□□ -0.58
SRSF1-203ENST00000581497 MYOM2P54296 1465 aa11.44□□□□□ -0.58
SRSF1-203ENST00000581497 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
SRSF1-203ENST00000581497 PLEKHH1Q9ULM0 1364 aa11.44□□□□□ -0.58
SRSF1-203ENST00000581497 OATP04181 439 aa11.44□□□□□ -0.58
SRSF1-203ENST00000581497 RXRBP28702 533 aa11.44□□□□□ -0.58
SRSF1-203ENST00000581497 PUS10Q3MIT2 529 aaKnown RBP11.44□□□□□ -0.58
SRSF1-203ENST00000581497 C8orf37Q96NL8 207 aa11.44□□□□□ -0.58
SRSF1-203ENST00000581497 CDC42BPGQ6DT37 1551 aa11.44□□□□□ -0.58
SRSF1-203ENST00000581497 ST8SIA5O15466 376 aa11.43□□□□□ -0.58
SRSF1-203ENST00000581497 FOXO3O43524 673 aa11.43□□□□□ -0.58
SRSF1-203ENST00000581497 SPSB2Q99619 263 aa11.43□□□□□ -0.58
SRSF1-203ENST00000581497 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
SRSF1-203ENST00000581497 IFT172Q9UG01 1749 aa11.43□□□□□ -0.58
SRSF1-203ENST00000581497 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
SRSF1-203ENST00000581497 NGLY1Q96IV0 654 aa11.42□□□□□ -0.58
SRSF1-203ENST00000581497 LAMC1P11047 1609 aa11.42□□□□□ -0.58
SRSF1-203ENST00000581497 FOXC1Q12948 553 aa11.41□□□□□ -0.58
SRSF1-203ENST00000581497 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
SRSF1-203ENST00000581497 DCAF11Q8TEB1 546 aa11.41□□□□□ -0.58
SRSF1-203ENST00000581497 QTRT2Q9H974 415 aaKnown RBP11.41□□□□□ -0.58
SRSF1-203ENST00000581497 PKD2L1Q9P0L9 805 aa11.41□□□□□ -0.58
SRSF1-203ENST00000581497 POGKQ9P215 609 aa11.41□□□□□ -0.58
SRSF1-203ENST00000581497 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
SRSF1-203ENST00000581497 PRAM1Q96QH2 718 aa11.4□□□□□ -0.58
SRSF1-203ENST00000581497 RBM6P78332 1123 aaKnown RBP11.39□□□□□ -0.59
SRSF1-203ENST00000581497 XPCQ01831 940 aaPredicted RBP11.39□□□□□ -0.59
SRSF1-203ENST00000581497 SAFB2Q14151 953 aaKnown RBP eCLIP11.39□□□□□ -0.59
SRSF1-203ENST00000581497 KNDC1Q76NI1 1749 aa11.39□□□□□ -0.59
SRSF1-203ENST00000581497 METTL3Q86U44 580 aaKnown RBP11.39□□□□□ -0.59
SRSF1-203ENST00000581497 CDK12Q9NYV4 1490 aaPredicted RBP11.38□□□□□ -0.59
SRSF1-203ENST00000581497 TRAK1Q9UPV9 953 aa11.38□□□□□ -0.59
SRSF1-203ENST00000581497 PXDNQ92626 1479 aa11.38□□□□□ -0.59
SRSF1-203ENST00000581497 DLC1Q96QB1 1528 aa11.37□□□□□ -0.59
SRSF1-203ENST00000581497 SEMA3EO15041 775 aa11.37□□□□□ -0.59
SRSF1-203ENST00000581497 RPIAP49247 311 aa11.37□□□□□ -0.59
SRSF1-203ENST00000581497 PSME1Q06323 249 aa11.37□□□□□ -0.59
SRSF1-203ENST00000581497 KRT28Q7Z3Y7 464 aa11.37□□□□□ -0.59
SRSF1-203ENST00000581497 FNBP4Q8N3X1 1017 aaPredicted RBP11.37□□□□□ -0.59
SRSF1-203ENST00000581497 USP21Q9UK80 565 aa11.37□□□□□ -0.59
SRSF1-203ENST00000581497 SPATA31A3Q5VYP0 1347 aa11.36□□□□□ -0.59
SRSF1-203ENST00000581497 HIC1Q14526 733 aa11.36□□□□□ -0.59
SRSF1-203ENST00000581497 TREML4Q6UXN2 200 aa11.36□□□□□ -0.59
SRSF1-203ENST00000581497 TRPC5Q9UL62 973 aaPredicted RBP11.36□□□□□ -0.59
SRSF1-203ENST00000581497 CRIPAKQ8N1N5 446 aa11.35□□□□□ -0.59
SRSF1-203ENST00000581497 ADGRB1O14514 1584 aa11.35□□□□□ -0.59
SRSF1-203ENST00000581497 EIF3AQ14152 1382 aaKnown RBP11.34□□□□□ -0.59
SRSF1-203ENST00000581497 MORN1Q5T089 497 aa11.34□□□□□ -0.59
SRSF1-203ENST00000581497 RDH13Q8NBN7 331 aa11.34□□□□□ -0.59
SRSF1-203ENST00000581497 FCF1Q9Y324 198 aaKnown RBP11.34□□□□□ -0.59
SRSF1-203ENST00000581497 FMN2Q9NZ56 1722 aa11.34□□□□□ -0.59
SRSF1-203ENST00000581497 COL22A1Q8NFW1 1626 aaPredicted RBP11.34□□□□□ -0.59
SRSF1-203ENST00000581497 ANKARQ7Z5J8 1434 aa11.34□□□□□ -0.59
SRSF1-203ENST00000581497 LCE2AQ5TA79 106 aaPredicted RBP11.33□□□□□ -0.6
SRSF1-203ENST00000581497 HIRIP3Q9BW71 556 aaPredicted RBP11.33□□□□□ -0.6
SRSF1-203ENST00000581497 KIF1AQ12756 1690 aa11.33□□□□□ -0.6
SRSF1-203ENST00000581497 MINK1Q8N4C8 1332 aaPredicted RBP11.33□□□□□ -0.6
SRSF1-203ENST00000581497 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
SRSF1-203ENST00000581497 WASLO00401 505 aaPredicted RBP11.32□□□□□ -0.6
SRSF1-203ENST00000581497 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
SRSF1-203ENST00000581497 HAP1P54257 671 aaPredicted RBP11.32□□□□□ -0.6
SRSF1-203ENST00000581497 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
SRSF1-203ENST00000581497 THAP11Q96EK4 314 aa11.32□□□□□ -0.6
SRSF1-203ENST00000581497 TOR4AQ9NXH8 423 aa11.32□□□□□ -0.6
SRSF1-203ENST00000581497 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
SRSF1-203ENST00000581497 RGS12O14924 1447 aa11.32□□□□□ -0.6
SRSF1-203ENST00000581497 TNS3Q68CZ2 1445 aa11.32□□□□□ -0.6
SRSF1-203ENST00000581497 ARHGEF10O15013 1369 aa11.31□□□□□ -0.6
SRSF1-203ENST00000581497 AVPP01185 164 aa11.31□□□□□ -0.6
SRSF1-203ENST00000581497 FUT2Q10981 343 aa11.31□□□□□ -0.6
SRSF1-203ENST00000581497 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
SRSF1-203ENST00000581497 ATRNO75882 1429 aa11.31□□□□□ -0.6
SRSF1-203ENST00000581497 ADGRB2O60241 1585 aa11.3□□□□□ -0.6
SRSF1-203ENST00000581497 FMNL1O95466 1100 aaPredicted RBP11.3□□□□□ -0.6
SRSF1-203ENST00000581497 CYP4X1Q8N118 509 aa11.3□□□□□ -0.6
SRSF1-203ENST00000581497 BCL9LQ86UU0 1499 aa11.3□□□□□ -0.6
SRSF1-203ENST00000581497 GPRASP1Q5JY77 1395 aa11.29□□□□□ -0.6
SRSF1-203ENST00000581497 ATP6V1AP38606 617 aa11.29□□□□□ -0.6
SRSF1-203ENST00000581497 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
SRSF1-203ENST00000581497 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
SRSF1-203ENST00000581497 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
SRSF1-203ENST00000581497 PRR36Q9H6K5 1346 aa11.29□□□□□ -0.6
SRSF1-203ENST00000581497 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms