RNA–Protein interactions for RNA: ENST00000579180.2

MSI2-206, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MSI2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-206ENST00000579180 C8orf37Q96NL8 207 aa20.22■□□□□ 0.83
MSI2-206ENST00000579180 THRAP3Q9Y2W1 955 aaKnown RBP20.22■□□□□ 0.83
MSI2-206ENST00000579180 SPATA31A5Q5VU36 1347 aa20.22■□□□□ 0.83
MSI2-206ENST00000579180 SPATA31A7Q8IWB4 1347 aa20.22■□□□□ 0.83
MSI2-206ENST00000579180 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
MSI2-206ENST00000579180 FNBP4Q8N3X1 1017 aaPredicted RBP20.21■□□□□ 0.83
MSI2-206ENST00000579180 MRPL50Q8N5N7 158 aaKnown RBP20.21■□□□□ 0.83
MSI2-206ENST00000579180 NGLY1Q96IV0 654 aa20.21■□□□□ 0.83
MSI2-206ENST00000579180 CRBNQ96SW2 442 aa20.21■□□□□ 0.83
MSI2-206ENST00000579180 SLC52A2Q9HAB3 445 aa20.21■□□□□ 0.83
MSI2-206ENST00000579180 PPP4R2Q9NY27 417 aa20.21■□□□□ 0.83
MSI2-206ENST00000579180 SOS1Q07889 1333 aaPredicted RBP20.2■□□□□ 0.82
MSI2-206ENST00000579180 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
MSI2-206ENST00000579180 CACNA1FO60840 1977 aa20.2■□□□□ 0.82
MSI2-206ENST00000579180 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
MSI2-206ENST00000579180 TOGARAM1Q9Y4F4 1720 aa20.19■□□□□ 0.82
MSI2-206ENST00000579180 KIF16BQ96L93 1317 aa20.19■□□□□ 0.82
MSI2-206ENST00000579180 KCNQ3O43525 872 aa20.19■□□□□ 0.82
MSI2-206ENST00000579180 ZKSCAN2Q63HK3 967 aa20.19■□□□□ 0.82
MSI2-206ENST00000579180 CDCA7Q9BWT1 371 aaPredicted RBP20.19■□□□□ 0.82
MSI2-206ENST00000579180 NOB1Q9ULX3 412 aaKnown RBP20.19■□□□□ 0.82
MSI2-206ENST00000579180 NFATC2IPQ8NCF5 419 aa20.18■□□□□ 0.82
MSI2-206ENST00000579180 DDX54Q8TDD1 881 aaKnown RBP20.18■□□□□ 0.82
MSI2-206ENST00000579180 TNNQ9UQP3 1299 aa20.17■□□□□ 0.82
MSI2-206ENST00000579180 HEG1Q9ULI3 1381 aa20.17■□□□□ 0.82
MSI2-206ENST00000579180 TCERG1O14776 1098 aaKnown RBP20.16■□□□□ 0.82
MSI2-206ENST00000579180 VPS72Q15906 364 aa20.16■□□□□ 0.82
MSI2-206ENST00000579180 BARGINQ6ZT62 677 aa20.16■□□□□ 0.82
MSI2-206ENST00000579180 PANK1Q8TE04 598 aa20.16■□□□□ 0.82
MSI2-206ENST00000579180 TNS2Q63HR2 1409 aa20.16■□□□□ 0.82
MSI2-206ENST00000579180 ERVV-2B6SEH9 535 aa20.16■□□□□ 0.82
MSI2-206ENST00000579180 ATF7IPQ6VMQ6 1270 aa20.16■□□□□ 0.82
MSI2-206ENST00000579180 ITGB4P16144 1822 aa20.15■□□□□ 0.82
MSI2-206ENST00000579180 EXOC5O00471 708 aa20.15■□□□□ 0.82
MSI2-206ENST00000579180 IPO8O15397 1037 aaKnown RBP20.15■□□□□ 0.82
MSI2-206ENST00000579180 RLBP1P12271 317 aa20.15■□□□□ 0.82
MSI2-206ENST00000579180 TRIM27P14373 513 aa20.15■□□□□ 0.82
MSI2-206ENST00000579180 PAPPAQ13219 1627 aa20.14■□□□□ 0.82
MSI2-206ENST00000579180 HOXB7P09629 217 aa20.14■□□□□ 0.81
MSI2-206ENST00000579180 CABP4P57796 275 aa20.14■□□□□ 0.81
MSI2-206ENST00000579180 ARHGAP45Q92619 1136 aa20.14■□□□□ 0.81
MSI2-206ENST00000579180 MS4A1P11836 297 aa20.13■□□□□ 0.81
MSI2-206ENST00000579180 ZNF790Q6PG37 636 aa20.13■□□□□ 0.81
MSI2-206ENST00000579180 USP21Q9UK80 565 aa20.13■□□□□ 0.81
MSI2-206ENST00000579180 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
MSI2-206ENST00000579180 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
MSI2-206ENST00000579180 CCDC9Q9Y3X0 531 aaKnown RBP20.13■□□□□ 0.81
MSI2-206ENST00000579180 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
MSI2-206ENST00000579180 C5P01031 1676 aa20.12■□□□□ 0.81
MSI2-206ENST00000579180 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
MSI2-206ENST00000579180 MEX3CQ5U5Q3 659 aaKnown RBP20.11■□□□□ 0.81
MSI2-206ENST00000579180 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
MSI2-206ENST00000579180 COG6Q9Y2V7 657 aa20.11■□□□□ 0.81
MSI2-206ENST00000579180 GLI3P10071 1580 aa20.1■□□□□ 0.81
MSI2-206ENST00000579180 GIGYF1O75420 1035 aaPredicted RBP20.1■□□□□ 0.81
MSI2-206ENST00000579180 DDB1Q16531 1140 aa20.1■□□□□ 0.81
MSI2-206ENST00000579180 B4GALNT3Q6L9W6 998 aa20.1■□□□□ 0.81
MSI2-206ENST00000579180 SLC4A2P04920 1241 aa20.09■□□□□ 0.81
MSI2-206ENST00000579180 FTSJ3Q8IY81 847 aaKnown RBP20.09■□□□□ 0.81
MSI2-206ENST00000579180 MVPQ14764 893 aaKnown RBP20.08■□□□□ 0.8
MSI2-206ENST00000579180 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.8
MSI2-206ENST00000579180 STK31Q9BXU1 1019 aa20.08■□□□□ 0.8
MSI2-206ENST00000579180 DOT1LQ8TEK3 1739 aa20.08■□□□□ 0.8
MSI2-206ENST00000579180 AFF2P51816 1311 aa20.08■□□□□ 0.8
MSI2-206ENST00000579180 THSD7AQ9UPZ6 1657 aa20.07■□□□□ 0.8
MSI2-206ENST00000579180 RGS12O14924 1447 aa20.07■□□□□ 0.8
MSI2-206ENST00000579180 CHMP4AQ9BY43 222 aa20.07■□□□□ 0.8
MSI2-206ENST00000579180 API5Q9BZZ5 524 aaKnown RBP20.07■□□□□ 0.8
MSI2-206ENST00000579180 PTPRCP08575 1304 aa20.07■□□□□ 0.8
MSI2-206ENST00000579180 FAM98CQ17RN3 349 aaKnown RBP20.06■□□□□ 0.8
MSI2-206ENST00000579180 TTC5Q8N0Z6 440 aa20.06■□□□□ 0.8
MSI2-206ENST00000579180 NECTIN2Q92692 538 aa20.06■□□□□ 0.8
MSI2-206ENST00000579180 ZNF496Q96IT1 587 aaPredicted RBP20.06■□□□□ 0.8
MSI2-206ENST00000579180 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
MSI2-206ENST00000579180 ABCC4O15439 1325 aa20.06■□□□□ 0.8
MSI2-206ENST00000579180 KCPQ6ZWJ8 1503 aa20.06■□□□□ 0.8
MSI2-206ENST00000579180 LAMB4A4D0S4 1761 aa20.06■□□□□ 0.8
MSI2-206ENST00000579180 KAT6BQ8WYB5 2073 aa20.06■□□□□ 0.8
MSI2-206ENST00000579180 PRAMEF22A3QJZ6 481 aa20.05■□□□□ 0.8
MSI2-206ENST00000579180 G2E3Q7L622 706 aa20.05■□□□□ 0.8
MSI2-206ENST00000579180 TMEM57Q8N5G2 664 aa20.05■□□□□ 0.8
MSI2-206ENST00000579180 ATRNO75882 1429 aa20.05■□□□□ 0.8
MSI2-206ENST00000579180 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
MSI2-206ENST00000579180 MARCH10Q8NA82 808 aaPredicted RBP20.05■□□□□ 0.8
MSI2-206ENST00000579180 FMNL2Q96PY5 1086 aa20.04■□□□□ 0.8
MSI2-206ENST00000579180 TMOD3Q9NYL9 352 aa20.04■□□□□ 0.8
MSI2-206ENST00000579180 AAMPQ13685 434 aa20.03■□□□□ 0.8
MSI2-206ENST00000579180 BCL9O00512 1426 aa20.03■□□□□ 0.8
MSI2-206ENST00000579180 PIGBQ92521 554 aa20.02■□□□□ 0.8
MSI2-206ENST00000579180 GJD4Q96KN9 370 aaPredicted RBP20.02■□□□□ 0.8
MSI2-206ENST00000579180 N4BP2Q86UW6 1770 aaPredicted RBP20.02■□□□□ 0.8
MSI2-206ENST00000579180 SNRPA1P09661 255 aaKnown RBP20.02■□□□□ 0.79
MSI2-206ENST00000579180 CHPF2Q9P2E5 772 aa20.02■□□□□ 0.79
MSI2-206ENST00000579180 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.79
MSI2-206ENST00000579180 FLIIQ13045 1269 aa20.01■□□□□ 0.79
MSI2-206ENST00000579180 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
MSI2-206ENST00000579180 TRPC5Q9UL62 973 aaPredicted RBP20.01■□□□□ 0.79
MSI2-206ENST00000579180 DBF4Q9UBU7 674 aaPredicted RBP20■□□□□ 0.79
MSI2-206ENST00000579180 INTS3Q68E01 1043 aaKnown RBP19.99■□□□□ 0.79
MSI2-206ENST00000579180 PHAXQ9H814 394 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms