RNA–Protein interactions for RNA: ENST00000578660.1

AC004477.1-201, humanhuman

Gene AC004477.1, Length 2,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004477.1-201ENST00000578660 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
AC004477.1-201ENST00000578660 ABCC4O15439 1325 aa13.12□□□□□ -0.31
AC004477.1-201ENST00000578660 ERBB3P21860 1342 aa13.12□□□□□ -0.31
AC004477.1-201ENST00000578660 CEMIPQ8WUJ3 1361 aa13.12□□□□□ -0.31
AC004477.1-201ENST00000578660 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
AC004477.1-201ENST00000578660 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
AC004477.1-201ENST00000578660 ABCA3Q99758 1704 aa13.12□□□□□ -0.31
AC004477.1-201ENST00000578660 VIRMAQ69YN4 1812 aaKnown RBP13.11□□□□□ -0.31
AC004477.1-201ENST00000578660 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
AC004477.1-201ENST00000578660 PTPRCP08575 1304 aa13.11□□□□□ -0.31
AC004477.1-201ENST00000578660 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
AC004477.1-201ENST00000578660 CACNA1FO60840 1977 aa13.1□□□□□ -0.31
AC004477.1-201ENST00000578660 SOS2Q07890 1332 aaPredicted RBP13.1□□□□□ -0.31
AC004477.1-201ENST00000578660 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
AC004477.1-201ENST00000578660 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
AC004477.1-201ENST00000578660 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
AC004477.1-201ENST00000578660 TAF7Q15545 349 aaPredicted RBP13.09□□□□□ -0.31
AC004477.1-201ENST00000578660 LRRC59Q96AG4 307 aaKnown RBP13.09□□□□□ -0.31
AC004477.1-201ENST00000578660 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
AC004477.1-201ENST00000578660 DDX17Q92841 729 aaKnown RBP13.09□□□□□ -0.31
AC004477.1-201ENST00000578660 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
AC004477.1-201ENST00000578660 IL17REQ8NFR9 667 aa13.09□□□□□ -0.31
AC004477.1-201ENST00000578660 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
AC004477.1-201ENST00000578660 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
AC004477.1-201ENST00000578660 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
AC004477.1-201ENST00000578660 ZBTB40Q9NUA8 1239 aa13.08□□□□□ -0.32
AC004477.1-201ENST00000578660 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
AC004477.1-201ENST00000578660 ZC3H6P61129 1189 aaKnown RBP13.08□□□□□ -0.32
AC004477.1-201ENST00000578660 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
AC004477.1-201ENST00000578660 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
AC004477.1-201ENST00000578660 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
AC004477.1-201ENST00000578660 PARP4Q9UKK3 1724 aaKnown RBP13.06□□□□□ -0.32
AC004477.1-201ENST00000578660 RGS12O14924 1447 aa13.06□□□□□ -0.32
AC004477.1-201ENST00000578660 HOXB7P09629 217 aa13.06□□□□□ -0.32
AC004477.1-201ENST00000578660 KRT24Q2M2I5 525 aa13.05□□□□□ -0.32
AC004477.1-201ENST00000578660 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
AC004477.1-201ENST00000578660 RAPGEF4Q8WZA2 1011 aa13.05□□□□□ -0.32
AC004477.1-201ENST00000578660 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
AC004477.1-201ENST00000578660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.32
AC004477.1-201ENST00000578660 SCN11AQ9UI33 1791 aa13.05□□□□□ -0.32
AC004477.1-201ENST00000578660 A0A0U1RQG5 324 aaPredicted RBP13.05□□□□□ -0.32
AC004477.1-201ENST00000578660 INTS3Q68E01 1043 aaKnown RBP13.05□□□□□ -0.32
AC004477.1-201ENST00000578660 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
AC004477.1-201ENST00000578660 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
AC004477.1-201ENST00000578660 ZBTB7BO15156 539 aaPredicted RBP13.04□□□□□ -0.32
AC004477.1-201ENST00000578660 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
AC004477.1-201ENST00000578660 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
AC004477.1-201ENST00000578660 TEFQ10587 303 aa13.04□□□□□ -0.32
AC004477.1-201ENST00000578660 NLRP2Q9NX02 1062 aa13.03□□□□□ -0.32
AC004477.1-201ENST00000578660 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
AC004477.1-201ENST00000578660 PXDNLA1KZ92 1463 aa13.03□□□□□ -0.32
AC004477.1-201ENST00000578660 CSB-PGBD3P0DP91 1061 aa13.03□□□□□ -0.32
AC004477.1-201ENST00000578660 PDZRN3Q9UPQ7 1066 aa13.03□□□□□ -0.32
AC004477.1-201ENST00000578660 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
AC004477.1-201ENST00000578660 AHDC1Q5TGY3 1603 aaPredicted RBP13.03□□□□□ -0.32
AC004477.1-201ENST00000578660 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
AC004477.1-201ENST00000578660 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
AC004477.1-201ENST00000578660 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
AC004477.1-201ENST00000578660 MEGF6O75095 1541 aa13.02□□□□□ -0.33
AC004477.1-201ENST00000578660 MRC1P22897 1456 aa13.01□□□□□ -0.33
AC004477.1-201ENST00000578660 SMC5Q8IY18 1101 aa13.01□□□□□ -0.33
AC004477.1-201ENST00000578660 COL22A1Q8NFW1 1626 aaPredicted RBP13.01□□□□□ -0.33
AC004477.1-201ENST00000578660 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
AC004477.1-201ENST00000578660 COL5A2P05997 1499 aaPredicted RBP13□□□□□ -0.33
AC004477.1-201ENST00000578660 CCT4P50991 539 aaKnown RBP13□□□□□ -0.33
AC004477.1-201ENST00000578660 LGR6Q9HBX8 967 aa13□□□□□ -0.33
AC004477.1-201ENST00000578660 PRDM11Q9NQV5 511 aa13□□□□□ -0.33
AC004477.1-201ENST00000578660 WDR17Q8IZU2 1322 aa13□□□□□ -0.33
AC004477.1-201ENST00000578660 BTBD11A6QL63 1104 aa13□□□□□ -0.33
AC004477.1-201ENST00000578660 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
AC004477.1-201ENST00000578660 LTBP4Q8N2S1 1624 aa13□□□□□ -0.33
AC004477.1-201ENST00000578660 CHRNA2Q15822 529 aa12.99□□□□□ -0.33
AC004477.1-201ENST00000578660 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
AC004477.1-201ENST00000578660 MPRIPQ6WCQ1 1025 aa12.99□□□□□ -0.33
AC004477.1-201ENST00000578660 GCC1Q96CN9 775 aa12.99□□□□□ -0.33
AC004477.1-201ENST00000578660 HDGFL1Q5TGJ6 251 aa12.99□□□□□ -0.33
AC004477.1-201ENST00000578660 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
AC004477.1-201ENST00000578660 UPF2Q9HAU5 1272 aaKnown RBP12.98□□□□□ -0.33
AC004477.1-201ENST00000578660 PHKG2P15735 406 aa12.98□□□□□ -0.33
AC004477.1-201ENST00000578660 FLIIQ13045 1269 aa12.98□□□□□ -0.33
AC004477.1-201ENST00000578660 COL14A1Q05707 1796 aaKnown RBP12.98□□□□□ -0.33
AC004477.1-201ENST00000578660 C1orf115Q9H7X2 142 aa12.97□□□□□ -0.33
AC004477.1-201ENST00000578660 KDM6AO15550 1401 aaPredicted RBP12.97□□□□□ -0.33
AC004477.1-201ENST00000578660 HEG1Q9ULI3 1381 aa12.97□□□□□ -0.33
AC004477.1-201ENST00000578660 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
AC004477.1-201ENST00000578660 NUCB1Q02818 461 aa12.95□□□□□ -0.34
AC004477.1-201ENST00000578660 RPAP2Q8IXW5 612 aaPredicted RBP12.95□□□□□ -0.34
AC004477.1-201ENST00000578660 ATP10DQ9P241 1426 aa12.95□□□□□ -0.34
AC004477.1-201ENST00000578660 G2E3Q7L622 706 aa12.95□□□□□ -0.34
AC004477.1-201ENST00000578660 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
AC004477.1-201ENST00000578660 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
AC004477.1-201ENST00000578660 FKBP5Q13451 457 aaPredicted RBP12.95□□□□□ -0.34
AC004477.1-201ENST00000578660 CARD10Q9BWT7 1032 aa12.95□□□□□ -0.34
AC004477.1-201ENST00000578660 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
AC004477.1-201ENST00000578660 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
AC004477.1-201ENST00000578660 BECN1Q14457 450 aa12.94□□□□□ -0.34
AC004477.1-201ENST00000578660 LNPKQ9C0E8 428 aa12.94□□□□□ -0.34
AC004477.1-201ENST00000578660 APBB1O00213 710 aa12.94□□□□□ -0.34
AC004477.1-201ENST00000578660 TOM1L2Q6ZVM7 507 aa12.94□□□□□ -0.34
AC004477.1-201ENST00000578660 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms