RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 PRKAR2BP31323 418 aa35.32■■■■□ 3.24
PPP4R1-204ENST00000577393 MTFR1LQ9H019 292 aa35.32■■■■□ 3.24
PPP4R1-204ENST00000577393 QSER1Q2KHR3 1735 aa35.32■■■■□ 3.24
PPP4R1-204ENST00000577393 TUBGCP6Q96RT7 1819 aa35.31■■■■□ 3.24
PPP4R1-204ENST00000577393 ATP6V1AP38606 617 aa35.3■■■■□ 3.24
PPP4R1-204ENST00000577393 GAS2L2Q8NHY3 880 aa35.3■■■■□ 3.24
PPP4R1-204ENST00000577393 PHACTR3Q96KR7 559 aa35.29■■■■□ 3.24
PPP4R1-204ENST00000577393 PPP1R1BQ9UD71 204 aaPredicted RBP35.29■■■■□ 3.24
PPP4R1-204ENST00000577393 PTGER2P43116 358 aa35.28■■■■□ 3.24
PPP4R1-204ENST00000577393 ITPK1Q13572 414 aa35.28■■■■□ 3.24
PPP4R1-204ENST00000577393 RBM42Q9BTD8 480 aaKnown RBP35.28■■■■□ 3.24
PPP4R1-204ENST00000577393 SLC52A2Q9HAB3 445 aa35.28■■■■□ 3.24
PPP4R1-204ENST00000577393 FCHSD2O94868 740 aa35.27■■■■□ 3.24
PPP4R1-204ENST00000577393 LINC00116Q8NCU8 138 aa35.27■■■■□ 3.24
PPP4R1-204ENST00000577393 SLC16A10Q8TF71 515 aa35.26■■■■□ 3.24
PPP4R1-204ENST00000577393 SLC4A9Q96Q91 983 aa35.26■■■■□ 3.24
PPP4R1-204ENST00000577393 C4BP0C0L5 1744 aa35.26■■■■□ 3.23
PPP4R1-204ENST00000577393 AK7Q96M32 723 aa35.25■■■■□ 3.23
PPP4R1-204ENST00000577393 COL23A1Q86Y22 540 aaPredicted RBP35.24■■■■□ 3.23
PPP4R1-204ENST00000577393 MAP3K5Q99683 1374 aa35.24■■■■□ 3.23
PPP4R1-204ENST00000577393 GNAT3A8MTJ3 354 aa35.23■■■■□ 3.23
PPP4R1-204ENST00000577393 MRC1P22897 1456 aa35.22■■■■□ 3.23
PPP4R1-204ENST00000577393 ADAMTS7Q9UKP4 1686 aa35.22■■■■□ 3.23
PPP4R1-204ENST00000577393 SGIP1Q9BQI5 828 aa35.22■■■■□ 3.23
PPP4R1-204ENST00000577393 VIRMAQ69YN4 1812 aaKnown RBP35.22■■■■□ 3.23
PPP4R1-204ENST00000577393 MSH5O43196 834 aa35.21■■■■□ 3.23
PPP4R1-204ENST00000577393 PTCD1O75127 700 aaKnown RBP35.21■■■■□ 3.23
PPP4R1-204ENST00000577393 AMIGO3Q86WK7 504 aa35.19■■■■□ 3.22
PPP4R1-204ENST00000577393 FLAD1Q8NFF5 587 aa35.19■■■■□ 3.22
PPP4R1-204ENST00000577393 IL17REQ8NFR9 667 aa35.19■■■■□ 3.22
PPP4R1-204ENST00000577393 MYBBP1AQ9BQG0 1328 aaKnown RBP35.17■■■■□ 3.22
PPP4R1-204ENST00000577393 ZNF831Q5JPB2 1677 aa35.17■■■■□ 3.22
PPP4R1-204ENST00000577393 SMIM5Q71RC9 77 aa35.16■■■■□ 3.22
PPP4R1-204ENST00000577393 SLC39A6Q13433 755 aa35.15■■■■□ 3.22
PPP4R1-204ENST00000577393 GNPATO15228 680 aa35.14■■■■□ 3.22
PPP4R1-204ENST00000577393 PHF14O94880 888 aa35.14■■■■□ 3.22
PPP4R1-204ENST00000577393 UBR3Q6ZT12 1888 aa35.14■■■■□ 3.22
PPP4R1-204ENST00000577393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.13■■■■□ 3.21
PPP4R1-204ENST00000577393 SSFA2P28290 1259 aa35.12■■■■□ 3.21
PPP4R1-204ENST00000577393 TEFQ10587 303 aa35.11■■■■□ 3.21
PPP4R1-204ENST00000577393 ARXQ96QS3 562 aa35.11■■■■□ 3.21
PPP4R1-204ENST00000577393 ZNF316A6NFI3 1004 aaPredicted RBP35.1■■■■□ 3.21
PPP4R1-204ENST00000577393 RC3H1Q5TC82 1133 aaKnown RBP35.1■■■■□ 3.21
PPP4R1-204ENST00000577393 PRKRIP1Q9H875 184 aaPredicted RBP35.1■■■■□ 3.21
PPP4R1-204ENST00000577393 POLD1P28340 1107 aa35.09■■■■□ 3.21
PPP4R1-204ENST00000577393 CEMIPQ8WUJ3 1361 aa35.09■■■■□ 3.21
PPP4R1-204ENST00000577393 CNTNAP4Q9C0A0 1308 aa35.08■■■■□ 3.21
PPP4R1-204ENST00000577393 PLEKHF1Q96S99 279 aa35.08■■■■□ 3.21
PPP4R1-204ENST00000577393 COL5A3P25940 1745 aaPredicted RBP35.08■■■■□ 3.21
PPP4R1-204ENST00000577393 COL24A1Q17RW2 1714 aa35.08■■■■□ 3.21
PPP4R1-204ENST00000577393 NEFMP07197 916 aa35.07■■■■□ 3.2
PPP4R1-204ENST00000577393 MSL1Q68DK7 614 aa35.07■■■■□ 3.2
PPP4R1-204ENST00000577393 RTF1Q92541 710 aaKnown RBP35.06■■■■□ 3.2
PPP4R1-204ENST00000577393 RTCBQ9Y3I0 505 aaKnown RBP35.06■■■■□ 3.2
PPP4R1-204ENST00000577393 FHDC1Q9C0D6 1143 aaPredicted RBP35.05■■■■□ 3.2
PPP4R1-204ENST00000577393 KCPQ6ZWJ8 1503 aa35.05■■■■□ 3.2
PPP4R1-204ENST00000577393 PNNQ9H307 717 aaKnown RBP35.04■■■■□ 3.2
PPP4R1-204ENST00000577393 TJP1Q07157 1748 aa35.03■■■■□ 3.2
PPP4R1-204ENST00000577393 CRKLP46109 303 aaKnown RBP35.03■■■■□ 3.2
PPP4R1-204ENST00000577393 MCM10Q7L590 875 aa35.03■■■■□ 3.2
PPP4R1-204ENST00000577393 DNAJC10Q8IXB1 793 aa35.03■■■■□ 3.2
PPP4R1-204ENST00000577393 TTC5Q8N0Z6 440 aa35.03■■■■□ 3.2
PPP4R1-204ENST00000577393 MYH14Q7Z406 1995 aaKnown RBP35.02■■■■□ 3.2
PPP4R1-204ENST00000577393 HTATSF1O43719 755 aaKnown RBP35.02■■■■□ 3.2
PPP4R1-204ENST00000577393 RPS6KA4O75676 772 aa35.02■■■■□ 3.2
PPP4R1-204ENST00000577393 SIPA1L3O60292 1781 aaPredicted RBP35.02■■■■□ 3.2
PPP4R1-204ENST00000577393 CICQ96RK0 1608 aaPredicted RBP35.02■■■■□ 3.2
PPP4R1-204ENST00000577393 DCTN1Q14203 1278 aa35.01■■■■□ 3.2
PPP4R1-204ENST00000577393 TRAPPC3LQ5T215 181 aa35.01■■■■□ 3.2
PPP4R1-204ENST00000577393 SYT17Q9BSW7 474 aa35.01■■■■□ 3.2
PPP4R1-204ENST00000577393 ZNF790Q6PG37 636 aa35■■■■□ 3.19
PPP4R1-204ENST00000577393 VSIG10Q8N0Z9 540 aa34.99■■■■□ 3.19
PPP4R1-204ENST00000577393 MAPK8IP3Q9UPT6 1336 aa34.98■■■■□ 3.19
PPP4R1-204ENST00000577393 UBR2Q8IWV8 1755 aa34.97■■■■□ 3.19
PPP4R1-204ENST00000577393 BTBD11A6QL63 1104 aa34.97■■■■□ 3.19
PPP4R1-204ENST00000577393 ADRA2BP18089 450 aa34.97■■■■□ 3.19
PPP4R1-204ENST00000577393 NFE2L2Q16236 605 aa34.97■■■■□ 3.19
PPP4R1-204ENST00000577393 INTS5Q6P9B9 1019 aaKnown RBP34.97■■■■□ 3.19
PPP4R1-204ENST00000577393 ARHGEF1Q92888 912 aaKnown RBP34.97■■■■□ 3.19
PPP4R1-204ENST00000577393 ZNF496Q96IT1 587 aaPredicted RBP34.97■■■■□ 3.19
PPP4R1-204ENST00000577393 CYP19A1P11511 503 aaPredicted RBP34.96■■■■□ 3.19
PPP4R1-204ENST00000577393 KCNQ3O43525 872 aa34.94■■■■□ 3.18
PPP4R1-204ENST00000577393 CCDC87Q9NVE4 849 aa34.94■■■■□ 3.18
PPP4R1-204ENST00000577393 KLHL34Q8N239 644 aa34.93■■■■□ 3.18
PPP4R1-204ENST00000577393 DLG5Q8TDM6 1919 aa34.93■■■■□ 3.18
PPP4R1-204ENST00000577393 HEG1Q9ULI3 1381 aa34.91■■■■□ 3.18
PPP4R1-204ENST00000577393 RFC4P35249 363 aa34.91■■■■□ 3.18
PPP4R1-204ENST00000577393 WDR43Q15061 677 aaKnown RBP eCLIP34.91■■■■□ 3.18
PPP4R1-204ENST00000577393 FMNL2Q96PY5 1086 aa34.9■■■■□ 3.18
PPP4R1-204ENST00000577393 TAF7Q15545 349 aaPredicted RBP34.88■■■■□ 3.17
PPP4R1-204ENST00000577393 ADAMTS8Q9UP79 889 aa34.87■■■■□ 3.17
PPP4R1-204ENST00000577393 ZBTB1Q9Y2K1 713 aa34.87■■■■□ 3.17
PPP4R1-204ENST00000577393 STARD3NLO95772 234 aa34.86■■■■□ 3.17
PPP4R1-204ENST00000577393 CCDC146Q8IYE0 955 aa34.86■■■■□ 3.17
PPP4R1-204ENST00000577393 TEX13AQ9BXU3 409 aaPredicted RBP34.86■■■■□ 3.17
PPP4R1-204ENST00000577393 SOS1Q07889 1333 aaPredicted RBP34.85■■■■□ 3.17
PPP4R1-204ENST00000577393 GYS1P13807 737 aa34.85■■■■□ 3.17
PPP4R1-204ENST00000577393 THUMPD2Q9BTF0 503 aaKnown RBP34.85■■■■□ 3.17
PPP4R1-204ENST00000577393 DCAF8L1A6NGE4 600 aa34.84■■■■□ 3.17
PPP4R1-204ENST00000577393 NLGN1Q8N2Q7 840 aa34.84■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 852.1 ms