RNA–Protein interactions for RNA: ENST00000574866.1

SRRM2-221, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 638 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-221ENST00000574866 ATG3Q9NT62 314 aa23.92■■□□□ 1.42
SRRM2-221ENST00000574866 HMGB2P26583 209 aaKnown RBP23.91■■□□□ 1.42
SRRM2-221ENST00000574866 CABP4P57796 275 aa23.91■■□□□ 1.42
SRRM2-221ENST00000574866 TAF1LQ8IZX4 1826 aa23.9■■□□□ 1.42
SRRM2-221ENST00000574866 MTHFSDQ2M296 383 aaKnown RBP23.9■■□□□ 1.42
SRRM2-221ENST00000574866 C4BP0C0L5 1744 aa23.9■■□□□ 1.42
SRRM2-221ENST00000574866 SLC16A10Q8TF71 515 aa23.88■■□□□ 1.41
SRRM2-221ENST00000574866 SGIP1Q9BQI5 828 aa23.88■■□□□ 1.41
SRRM2-221ENST00000574866 NUDCQ9Y266 331 aa23.88■■□□□ 1.41
SRRM2-221ENST00000574866 MRC1P22897 1456 aa23.87■■□□□ 1.41
SRRM2-221ENST00000574866 SCN11AQ9UI33 1791 aa23.87■■□□□ 1.41
SRRM2-221ENST00000574866 LINC00116Q8NCU8 138 aa23.86■■□□□ 1.41
SRRM2-221ENST00000574866 AK7Q96M32 723 aa23.86■■□□□ 1.41
SRRM2-221ENST00000574866 ADAMTS7Q9UKP4 1686 aa23.86■■□□□ 1.41
SRRM2-221ENST00000574866 ATP6V1AP38606 617 aa23.85■■□□□ 1.41
SRRM2-221ENST00000574866 ITPK1Q13572 414 aa23.85■■□□□ 1.41
SRRM2-221ENST00000574866 CCDC184Q52MB2 194 aa23.85■■□□□ 1.41
SRRM2-221ENST00000574866 NFATC2IPQ8NCF5 419 aa23.85■■□□□ 1.41
SRRM2-221ENST00000574866 RSPH6AQ9H0K4 717 aa23.85■■□□□ 1.41
SRRM2-221ENST00000574866 ZNF831Q5JPB2 1677 aa23.84■■□□□ 1.41
SRRM2-221ENST00000574866 RNMTO43148 476 aaKnown RBP23.84■■□□□ 1.41
SRRM2-221ENST00000574866 COL23A1Q86Y22 540 aaPredicted RBP23.84■■□□□ 1.41
SRRM2-221ENST00000574866 LGR6Q9HBX8 967 aa23.84■■□□□ 1.41
SRRM2-221ENST00000574866 WDR43Q15061 677 aaKnown RBP eCLIP23.83■■□□□ 1.416e-13■■□□□ 12.4
SRRM2-221ENST00000574866 GAS2L2Q8NHY3 880 aa23.83■■□□□ 1.41
SRRM2-221ENST00000574866 SLC4A9Q96Q91 983 aa23.83■■□□□ 1.41
SRRM2-221ENST00000574866 RBM42Q9BTD8 480 aaKnown RBP23.83■■□□□ 1.41
SRRM2-221ENST00000574866 SLC52A2Q9HAB3 445 aa23.83■■□□□ 1.41
SRRM2-221ENST00000574866 MAP3K5Q99683 1374 aa23.82■■□□□ 1.4
SRRM2-221ENST00000574866 PRKAR2BP31323 418 aa23.82■■□□□ 1.4
SRRM2-221ENST00000574866 FLAD1Q8NFF5 587 aa23.82■■□□□ 1.4
SRRM2-221ENST00000574866 PNISRQ8TF01 805 aaKnown RBP23.82■■□□□ 1.4
SRRM2-221ENST00000574866 COL24A1Q17RW2 1714 aa23.81■■□□□ 1.4
SRRM2-221ENST00000574866 MSH5O43196 834 aa23.81■■□□□ 1.4
SRRM2-221ENST00000574866 U2AF1L5P0DN76 240 aaPredicted RBP23.81■■□□□ 1.4
SRRM2-221ENST00000574866 U2AF1Q01081 240 aaKnown RBP eCLIP23.81■■□□□ 1.47e-11■□□□□ 9.9
SRRM2-221ENST00000574866 AMIGO3Q86WK7 504 aa23.81■■□□□ 1.4
SRRM2-221ENST00000574866 UBR3Q6ZT12 1888 aa23.79■■□□□ 1.4
SRRM2-221ENST00000574866 ARXQ96QS3 562 aa23.79■■□□□ 1.4
SRRM2-221ENST00000574866 PTCD1O75127 700 aaKnown RBP23.78■■□□□ 1.4
SRRM2-221ENST00000574866 PHF14O94880 888 aa23.78■■□□□ 1.4
SRRM2-221ENST00000574866 SSFA2P28290 1259 aa23.78■■□□□ 1.4
SRRM2-221ENST00000574866 POLD1P28340 1107 aa23.78■■□□□ 1.4
SRRM2-221ENST00000574866 PHACTR3Q96KR7 559 aa23.78■■□□□ 1.4
SRRM2-221ENST00000574866 CICQ96RK0 1608 aaPredicted RBP23.77■■□□□ 1.4
SRRM2-221ENST00000574866 COL5A3P25940 1745 aaPredicted RBP23.77■■□□□ 1.4
SRRM2-221ENST00000574866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.77■■□□□ 1.4
SRRM2-221ENST00000574866 GNAT3A8MTJ3 354 aa23.77■■□□□ 1.4
SRRM2-221ENST00000574866 GNPATO15228 680 aa23.77■■□□□ 1.4
SRRM2-221ENST00000574866 FCHSD2O94868 740 aa23.77■■□□□ 1.4
SRRM2-221ENST00000574866 SMIM5Q71RC9 77 aa23.76■■□□□ 1.39
SRRM2-221ENST00000574866 FHDC1Q9C0D6 1143 aaPredicted RBP23.76■■□□□ 1.39
SRRM2-221ENST00000574866 CNTNAP4Q9C0A0 1308 aa23.75■■□□□ 1.39
SRRM2-221ENST00000574866 VIRMAQ69YN4 1812 aaKnown RBP23.75■■□□□ 1.39
SRRM2-221ENST00000574866 TJP1Q07157 1748 aa23.74■■□□□ 1.39
SRRM2-221ENST00000574866 MSL1Q68DK7 614 aa23.74■■□□□ 1.39
SRRM2-221ENST00000574866 FAM9BQ8IZU0 186 aa23.74■■□□□ 1.39
SRRM2-221ENST00000574866 PNNQ9H307 717 aaKnown RBP23.74■■□□□ 1.39
SRRM2-221ENST00000574866 KCPQ6ZWJ8 1503 aa23.74■■□□□ 1.39
SRRM2-221ENST00000574866 RC3H1Q5TC82 1133 aaKnown RBP23.73■■□□□ 1.39
SRRM2-221ENST00000574866 IL17REQ8NFR9 667 aa23.73■■□□□ 1.39
SRRM2-221ENST00000574866 SLC39A6Q13433 755 aa23.72■■□□□ 1.39
SRRM2-221ENST00000574866 SYT17Q9BSW7 474 aa23.72■■□□□ 1.39
SRRM2-221ENST00000574866 CEMIPQ8WUJ3 1361 aa23.72■■□□□ 1.39
SRRM2-221ENST00000574866 TEFQ10587 303 aa23.71■■□□□ 1.39
SRRM2-221ENST00000574866 ADAMTS8Q9UP79 889 aa23.71■■□□□ 1.39
SRRM2-221ENST00000574866 RTCBQ9Y3I0 505 aaKnown RBP23.71■■□□□ 1.39
SRRM2-221ENST00000574866 UBR2Q8IWV8 1755 aa23.68■■□□□ 1.38
SRRM2-221ENST00000574866 CRKLP46109 303 aaKnown RBP23.68■■□□□ 1.38
SRRM2-221ENST00000574866 SIPA1L3O60292 1781 aaPredicted RBP23.68■■□□□ 1.38
SRRM2-221ENST00000574866 RPS6KA4O75676 772 aa23.67■■□□□ 1.38
SRRM2-221ENST00000574866 DNAJC10Q8IXB1 793 aa23.67■■□□□ 1.38
SRRM2-221ENST00000574866 NEFMP07197 916 aa23.66■■□□□ 1.38
SRRM2-221ENST00000574866 ADRA2BP18089 450 aa23.66■■□□□ 1.38
SRRM2-221ENST00000574866 TRAPPC3LQ5T215 181 aa23.66■■□□□ 1.38
SRRM2-221ENST00000574866 TTC5Q8N0Z6 440 aa23.66■■□□□ 1.38
SRRM2-221ENST00000574866 KLHL34Q8N239 644 aa23.66■■□□□ 1.38
SRRM2-221ENST00000574866 RTF1Q92541 710 aaKnown RBP23.65■■□□□ 1.38
SRRM2-221ENST00000574866 VSIG10Q8N0Z9 540 aa23.64■■□□□ 1.37
SRRM2-221ENST00000574866 PLEKHF1Q96S99 279 aa23.64■■□□□ 1.37
SRRM2-221ENST00000574866 MYH14Q7Z406 1995 aaKnown RBP23.63■■□□□ 1.37
SRRM2-221ENST00000574866 DCAF8L1A6NGE4 600 aa23.63■■□□□ 1.37
SRRM2-221ENST00000574866 ZNF790Q6PG37 636 aa23.63■■□□□ 1.37
SRRM2-221ENST00000574866 MCM10Q7L590 875 aa23.63■■□□□ 1.37
SRRM2-221ENST00000574866 ARHGEF1Q92888 912 aaKnown RBP23.63■■□□□ 1.37
SRRM2-221ENST00000574866 RUNDC1Q96C34 613 aa23.63■■□□□ 1.37
SRRM2-221ENST00000574866 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
SRRM2-221ENST00000574866 C4AP0C0L4 1744 aa23.62■■□□□ 1.37
SRRM2-221ENST00000574866 HTATSF1O43719 755 aaKnown RBP23.62■■□□□ 1.37
SRRM2-221ENST00000574866 CYP19A1P11511 503 aaPredicted RBP23.62■■□□□ 1.37
SRRM2-221ENST00000574866 INTS5Q6P9B9 1019 aaKnown RBP23.62■■□□□ 1.37
SRRM2-221ENST00000574866 CCDC87Q9NVE4 849 aa23.62■■□□□ 1.37
SRRM2-221ENST00000574866 ZNF496Q96IT1 587 aaPredicted RBP23.61■■□□□ 1.37
SRRM2-221ENST00000574866 BTBD11A6QL63 1104 aa23.6■■□□□ 1.37
SRRM2-221ENST00000574866 RFC4P35249 363 aa23.6■■□□□ 1.37
SRRM2-221ENST00000574866 DCTN1Q14203 1278 aa23.6■■□□□ 1.37
SRRM2-221ENST00000574866 HEG1Q9ULI3 1381 aa23.6■■□□□ 1.37
SRRM2-221ENST00000574866 NLGN2Q8NFZ4 835 aa23.59■■□□□ 1.37
SRRM2-221ENST00000574866 GYS1P13807 737 aa23.58■■□□□ 1.37
SRRM2-221ENST00000574866 NFE2L2Q16236 605 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms