RNA–Protein interactions for RNA: ENST00000574544.1

ABR-229, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-229ENST00000574544 TEFQ10587 303 aa11.88□□□□□ -0.51
ABR-229ENST00000574544 LINC00116Q8NCU8 138 aa11.88□□□□□ -0.51
ABR-229ENST00000574544 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
ABR-229ENST00000574544 NHSQ6T4R5 1651 aa11.87□□□□□ -0.51
ABR-229ENST00000574544 FCHSD2O94868 740 aa11.87□□□□□ -0.51
ABR-229ENST00000574544 RALBP1Q15311 655 aa11.87□□□□□ -0.51
ABR-229ENST00000574544 TRAPPC3LQ5T215 181 aa11.87□□□□□ -0.51
ABR-229ENST00000574544 RTF1Q92541 710 aaKnown RBP11.87□□□□□ -0.51
ABR-229ENST00000574544 FHDC1Q9C0D6 1143 aaPredicted RBP11.87□□□□□ -0.51
ABR-229ENST00000574544 KDRP35968 1356 aa11.87□□□□□ -0.51
ABR-229ENST00000574544 ANKRD26Q9UPS8 1709 aa11.86□□□□□ -0.51
ABR-229ENST00000574544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
ABR-229ENST00000574544 IL17REQ8NFR9 667 aa11.86□□□□□ -0.51
ABR-229ENST00000574544 SLC4A9Q96Q91 983 aa11.86□□□□□ -0.51
ABR-229ENST00000574544 SYT17Q9BSW7 474 aa11.86□□□□□ -0.51
ABR-229ENST00000574544 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
ABR-229ENST00000574544 RTCBQ9Y3I0 505 aaKnown RBP11.86□□□□□ -0.51
ABR-229ENST00000574544 BTAF1O14981 1849 aa11.86□□□□□ -0.51
ABR-229ENST00000574544 NUP188Q5SRE5 1749 aa11.86□□□□□ -0.51
ABR-229ENST00000574544 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
ABR-229ENST00000574544 TTC5Q8N0Z6 440 aa11.85□□□□□ -0.51
ABR-229ENST00000574544 RREB1Q92766 1687 aa11.84□□□□□ -0.51
ABR-229ENST00000574544 RFC4P35249 363 aa11.84□□□□□ -0.51
ABR-229ENST00000574544 DCTN1Q14203 1278 aa11.84□□□□□ -0.51
ABR-229ENST00000574544 PNNQ9H307 717 aaKnown RBP11.84□□□□□ -0.51
ABR-229ENST00000574544 DOT1LQ8TEK3 1739 aa11.83□□□□□ -0.52
ABR-229ENST00000574544 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
ABR-229ENST00000574544 MCM10Q7L590 875 aa11.83□□□□□ -0.52
ABR-229ENST00000574544 AMIGO3Q86WK7 504 aa11.83□□□□□ -0.52
ABR-229ENST00000574544 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
ABR-229ENST00000574544 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
ABR-229ENST00000574544 KDM6AO15550 1401 aaPredicted RBP11.83□□□□□ -0.52
ABR-229ENST00000574544 PLEKHG2Q9H7P9 1386 aa11.82□□□□□ -0.52
ABR-229ENST00000574544 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
ABR-229ENST00000574544 RPS6KA4O75676 772 aa11.82□□□□□ -0.52
ABR-229ENST00000574544 SSFA2P28290 1259 aa11.82□□□□□ -0.52
ABR-229ENST00000574544 RC3H1Q5TC82 1133 aaKnown RBP11.82□□□□□ -0.52
ABR-229ENST00000574544 SGIP1Q9BQI5 828 aa11.82□□□□□ -0.52
ABR-229ENST00000574544 SHANK3Q9BYB0 1731 aa11.81□□□□□ -0.52
ABR-229ENST00000574544 CANXP27824 592 aaKnown RBP11.81□□□□□ -0.52
ABR-229ENST00000574544 CRKLP46109 303 aaKnown RBP11.81□□□□□ -0.52
ABR-229ENST00000574544 GPR162Q16538 588 aa11.81□□□□□ -0.52
ABR-229ENST00000574544 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
ABR-229ENST00000574544 MAPK8IP3Q9UPT6 1336 aa11.81□□□□□ -0.52
ABR-229ENST00000574544 MAP3K5Q99683 1374 aa11.8□□□□□ -0.52
ABR-229ENST00000574544 KCNQ3O43525 872 aa11.8□□□□□ -0.52
ABR-229ENST00000574544 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
ABR-229ENST00000574544 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
ABR-229ENST00000574544 NPM2Q86SE8 214 aaKnown RBP11.8□□□□□ -0.52
ABR-229ENST00000574544 MIS18AQ9NYP9 233 aa11.8□□□□□ -0.52
ABR-229ENST00000574544 STARD3NLO95772 234 aa11.79□□□□□ -0.52
ABR-229ENST00000574544 ZNF790Q6PG37 636 aa11.79□□□□□ -0.52
ABR-229ENST00000574544 CCDC146Q8IYE0 955 aa11.79□□□□□ -0.52
ABR-229ENST00000574544 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
ABR-229ENST00000574544 ZNF496Q96IT1 587 aaPredicted RBP11.79□□□□□ -0.52
ABR-229ENST00000574544 WWC3Q9ULE0 1092 aa11.79□□□□□ -0.52
ABR-229ENST00000574544 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
ABR-229ENST00000574544 PKD1L3Q7Z443 1732 aa11.78□□□□□ -0.52
ABR-229ENST00000574544 RGPD3A6NKT7 1758 aaPredicted RBP11.78□□□□□ -0.52
ABR-229ENST00000574544 RGPD4Q7Z3J3 1758 aa11.78□□□□□ -0.52
ABR-229ENST00000574544 ZPR1O75312 459 aa11.78□□□□□ -0.52
ABR-229ENST00000574544 RIPK4P57078 832 aa11.78□□□□□ -0.52
ABR-229ENST00000574544 TAF7Q15545 349 aaPredicted RBP11.78□□□□□ -0.52
ABR-229ENST00000574544 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
ABR-229ENST00000574544 FMNL2Q96PY5 1086 aa11.78□□□□□ -0.52
ABR-229ENST00000574544 PRKRIP1Q9H875 184 aaPredicted RBP11.78□□□□□ -0.52
ABR-229ENST00000574544 CCDC87Q9NVE4 849 aa11.78□□□□□ -0.52
ABR-229ENST00000574544 COL3A1P02461 1466 aaPredicted RBP11.77□□□□□ -0.52
ABR-229ENST00000574544 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.53
ABR-229ENST00000574544 MMP10P09238 476 aa11.77□□□□□ -0.53
ABR-229ENST00000574544 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
ABR-229ENST00000574544 NLGN2Q8NFZ4 835 aa11.77□□□□□ -0.53
ABR-229ENST00000574544 PLEKHF1Q96S99 279 aa11.77□□□□□ -0.53
ABR-229ENST00000574544 TEX13AQ9BXU3 409 aaPredicted RBP11.77□□□□□ -0.53
ABR-229ENST00000574544 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.53
ABR-229ENST00000574544 RRP7AQ9Y3A4 280 aaKnown RBP11.77□□□□□ -0.53
ABR-229ENST00000574544 CNTNAP4Q9C0A0 1308 aa11.77□□□□□ -0.53
ABR-229ENST00000574544 ADRA2BP18089 450 aa11.76□□□□□ -0.53
ABR-229ENST00000574544 NFE2L2Q16236 605 aa11.76□□□□□ -0.53
ABR-229ENST00000574544 THUMPD2Q9BTF0 503 aaKnown RBP11.76□□□□□ -0.53
ABR-229ENST00000574544 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
ABR-229ENST00000574544 LRP5O75197 1615 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 TOGARAM1Q9Y4F4 1720 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 ITGB4P16144 1822 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 A1BGP04217 495 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 YY1P25490 414 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 ZBTB1Q9Y2K1 713 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 LAS1LQ9Y4W2 734 aaKnown RBP11.75□□□□□ -0.53
ABR-229ENST00000574544 USP16Q9Y5T5 823 aa11.75□□□□□ -0.53
ABR-229ENST00000574544 ANP32CO43423 234 aa11.74□□□□□ -0.53
ABR-229ENST00000574544 GYS1P13807 737 aa11.74□□□□□ -0.53
ABR-229ENST00000574544 BICDL1Q6ZP65 573 aa11.74□□□□□ -0.53
ABR-229ENST00000574544 TBC1D2BQ9UPU7 963 aa11.74□□□□□ -0.53
ABR-229ENST00000574544 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
ABR-229ENST00000574544 LY75O60449 1722 aa11.74□□□□□ -0.53
ABR-229ENST00000574544 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
ABR-229ENST00000574544 SNRPA1P09661 255 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms