RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
NPLOC4-214ENST00000573876 DCTN1Q14203 1278 aa16.91■□□□□ 0.3
NPLOC4-214ENST00000573876 BTAF1O14981 1849 aa16.91■□□□□ 0.3
NPLOC4-214ENST00000573876 TRIM35Q9UPQ4 493 aa16.9■□□□□ 0.3
NPLOC4-214ENST00000573876 CEMIPQ8WUJ3 1361 aa16.89■□□□□ 0.3
NPLOC4-214ENST00000573876 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
NPLOC4-214ENST00000573876 CAMKK2Q96RR4 588 aa16.89■□□□□ 0.29
NPLOC4-214ENST00000573876 DLG5Q8TDM6 1919 aa16.89■□□□□ 0.29
NPLOC4-214ENST00000573876 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
NPLOC4-214ENST00000573876 EZH2Q15910 746 aaKnown RBP16.88■□□□□ 0.29
NPLOC4-214ENST00000573876 ASAP1Q9ULH1 1129 aa16.88■□□□□ 0.29
NPLOC4-214ENST00000573876 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
NPLOC4-214ENST00000573876 ADAMTS7Q9UKP4 1686 aa16.88■□□□□ 0.29
NPLOC4-214ENST00000573876 MRC1P22897 1456 aa16.87■□□□□ 0.29
NPLOC4-214ENST00000573876 VIRMAQ69YN4 1812 aaKnown RBP16.87■□□□□ 0.29
NPLOC4-214ENST00000573876 TAF7Q15545 349 aaPredicted RBP16.87■□□□□ 0.29
NPLOC4-214ENST00000573876 TXNRD1Q16881 649 aa16.87■□□□□ 0.29
NPLOC4-214ENST00000573876 TTC5Q8N0Z6 440 aa16.87■□□□□ 0.29
NPLOC4-214ENST00000573876 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
NPLOC4-214ENST00000573876 THUMPD2Q9BTF0 503 aaKnown RBP16.87■□□□□ 0.29
NPLOC4-214ENST00000573876 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
NPLOC4-214ENST00000573876 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
NPLOC4-214ENST00000573876 CALD1Q05682 793 aaKnown RBP16.86■□□□□ 0.29
NPLOC4-214ENST00000573876 CCDC27Q2M243 656 aa16.86■□□□□ 0.29
NPLOC4-214ENST00000573876 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
NPLOC4-214ENST00000573876 SLC27A3Q5K4L6 730 aa16.86■□□□□ 0.29
NPLOC4-214ENST00000573876 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
NPLOC4-214ENST00000573876 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
NPLOC4-214ENST00000573876 CCNL1Q9UK58 526 aaPredicted RBP16.85■□□□□ 0.29
NPLOC4-214ENST00000573876 LOC102724428A0A0B4J2F2 783 aa16.84■□□□□ 0.29
NPLOC4-214ENST00000573876 SIK1P57059 783 aa16.84■□□□□ 0.29
NPLOC4-214ENST00000573876 SLC39A6Q13433 755 aa16.84■□□□□ 0.29
NPLOC4-214ENST00000573876 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
NPLOC4-214ENST00000573876 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
NPLOC4-214ENST00000573876 PTCD1O75127 700 aaKnown RBP16.83■□□□□ 0.28
NPLOC4-214ENST00000573876 ZNF790Q6PG37 636 aa16.83■□□□□ 0.28
NPLOC4-214ENST00000573876 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.28
NPLOC4-214ENST00000573876 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
NPLOC4-214ENST00000573876 PROM2Q8N271 834 aa16.82■□□□□ 0.28
NPLOC4-214ENST00000573876 BABAM1Q9NWV8 329 aa16.82■□□□□ 0.28
NPLOC4-214ENST00000573876 ATP6V1AP38606 617 aa16.81■□□□□ 0.28
NPLOC4-214ENST00000573876 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
NPLOC4-214ENST00000573876 MIS18AQ9NYP9 233 aa16.81■□□□□ 0.28
NPLOC4-214ENST00000573876 TSPYL4Q9UJ04 414 aa16.81■□□□□ 0.28
NPLOC4-214ENST00000573876 FMNL2Q96PY5 1086 aa16.8■□□□□ 0.28
NPLOC4-214ENST00000573876 SIPA1L3O60292 1781 aaPredicted RBP16.79■□□□□ 0.28
NPLOC4-214ENST00000573876 GNAI1P63096 354 aa16.79■□□□□ 0.28
NPLOC4-214ENST00000573876 LRRC4BQ9NT99 713 aa16.79■□□□□ 0.28
NPLOC4-214ENST00000573876 LY75O60449 1722 aa16.79■□□□□ 0.28
NPLOC4-214ENST00000573876 KCNQ4P56696 695 aa16.78■□□□□ 0.28
NPLOC4-214ENST00000573876 GOLGA2Q08379 1002 aa16.78■□□□□ 0.28
NPLOC4-214ENST00000573876 VSIG10Q8N0Z9 540 aa16.78■□□□□ 0.28
NPLOC4-214ENST00000573876 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
NPLOC4-214ENST00000573876 STK32BQ9NY57 414 aa16.78■□□□□ 0.28
NPLOC4-214ENST00000573876 ZNF521Q96K83 1311 aa16.77■□□□□ 0.28
NPLOC4-214ENST00000573876 KCNQ3O43525 872 aa16.77■□□□□ 0.28
NPLOC4-214ENST00000573876 ZNF496Q96IT1 587 aaPredicted RBP16.77■□□□□ 0.28
NPLOC4-214ENST00000573876 CFAP44Q96MT7 982 aa16.77■□□□□ 0.28
NPLOC4-214ENST00000573876 RREB1Q92766 1687 aa16.77■□□□□ 0.28
NPLOC4-214ENST00000573876 IL16Q14005 1332 aa16.76■□□□□ 0.27
NPLOC4-214ENST00000573876 CHL1O00533 1208 aa16.76■□□□□ 0.27
NPLOC4-214ENST00000573876 CDCA7LQ96GN5 454 aa16.76■□□□□ 0.27
NPLOC4-214ENST00000573876 TEX13AQ9BXU3 409 aaPredicted RBP16.76■□□□□ 0.27
NPLOC4-214ENST00000573876 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
NPLOC4-214ENST00000573876 PAPPAQ13219 1627 aa16.76■□□□□ 0.27
NPLOC4-214ENST00000573876 HEG1Q9ULI3 1381 aa16.76■□□□□ 0.27
NPLOC4-214ENST00000573876 ZBED9Q6R2W3 1325 aa16.75■□□□□ 0.27
NPLOC4-214ENST00000573876 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
NPLOC4-214ENST00000573876 ITPK1Q13572 414 aa16.75■□□□□ 0.27
NPLOC4-214ENST00000573876 SLC4A9Q96Q91 983 aa16.75■□□□□ 0.27
NPLOC4-214ENST00000573876 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
NPLOC4-214ENST00000573876 NUP188Q5SRE5 1749 aa16.74■□□□□ 0.27
NPLOC4-214ENST00000573876 STARD3NLO95772 234 aa16.74■□□□□ 0.27
NPLOC4-214ENST00000573876 SNRPA1P09661 255 aaKnown RBP16.74■□□□□ 0.27
NPLOC4-214ENST00000573876 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
NPLOC4-214ENST00000573876 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
NPLOC4-214ENST00000573876 DNAJC10Q8IXB1 793 aa16.74■□□□□ 0.27
NPLOC4-214ENST00000573876 AK7Q96M32 723 aa16.74■□□□□ 0.27
NPLOC4-214ENST00000573876 SLC15A2Q16348 729 aa16.73■□□□□ 0.27
NPLOC4-214ENST00000573876 LINC00116Q8NCU8 138 aa16.73■□□□□ 0.27
NPLOC4-214ENST00000573876 MBIPQ9NS73 344 aa16.73■□□□□ 0.27
NPLOC4-214ENST00000573876 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
NPLOC4-214ENST00000573876 E9PSI1 815 aa16.72■□□□□ 0.27
NPLOC4-214ENST00000573876 RC3H1Q5TC82 1133 aaKnown RBP16.72■□□□□ 0.27
NPLOC4-214ENST00000573876 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
NPLOC4-214ENST00000573876 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
NPLOC4-214ENST00000573876 ANO8Q9HCE9 1232 aaPredicted RBP16.72■□□□□ 0.27
NPLOC4-214ENST00000573876 TFCP2L1Q9NZI6 479 aa16.72■□□□□ 0.27
NPLOC4-214ENST00000573876 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
NPLOC4-214ENST00000573876 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
NPLOC4-214ENST00000573876 KDM3BQ7LBC6 1761 aa16.71■□□□□ 0.27
NPLOC4-214ENST00000573876 CNTNAP4Q9C0A0 1308 aa16.7■□□□□ 0.26
NPLOC4-214ENST00000573876 C5P01031 1676 aa16.7■□□□□ 0.26
NPLOC4-214ENST00000573876 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
NPLOC4-214ENST00000573876 CYP19A1P11511 503 aaPredicted RBP16.7■□□□□ 0.26
NPLOC4-214ENST00000573876 CRKLP46109 303 aaKnown RBP16.7■□□□□ 0.26
NPLOC4-214ENST00000573876 R3HDM1Q15032 1099 aaKnown RBP16.7■□□□□ 0.26
NPLOC4-214ENST00000573876 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
NPLOC4-214ENST00000573876 TAF1LQ8IZX4 1826 aa16.7■□□□□ 0.26
NPLOC4-214ENST00000573876 GNPATO15228 680 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms