RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
CTDNEP1-205ENST00000570828 PTGER2P43116 358 aa16.87■□□□□ 0.29
CTDNEP1-205ENST00000570828 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
CTDNEP1-205ENST00000570828 TFCP2L1Q9NZI6 479 aa16.87■□□□□ 0.29
CTDNEP1-205ENST00000570828 PLEKHG2Q9H7P9 1386 aa16.87■□□□□ 0.29
CTDNEP1-205ENST00000570828 MAP2P11137 1827 aaKnown RBP16.86■□□□□ 0.29
CTDNEP1-205ENST00000570828 GALR2O43603 387 aaPredicted RBP16.86■□□□□ 0.29
CTDNEP1-205ENST00000570828 IGSF1Q8N6C5 1336 aa16.86■□□□□ 0.29
CTDNEP1-205ENST00000570828 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
CTDNEP1-205ENST00000570828 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
CTDNEP1-205ENST00000570828 AMER1Q5JTC6 1135 aaPredicted RBP16.85■□□□□ 0.29
CTDNEP1-205ENST00000570828 HMGB2P26583 209 aaKnown RBP16.84■□□□□ 0.29
CTDNEP1-205ENST00000570828 IFNL2Q8IZJ0 200 aa16.84■□□□□ 0.29
CTDNEP1-205ENST00000570828 PLSCR2Q9NRY7 297 aa16.84■□□□□ 0.29
CTDNEP1-205ENST00000570828 PNPLA7Q6ZV29 1317 aa16.84■□□□□ 0.29
CTDNEP1-205ENST00000570828 LY75O60449 1722 aa16.84■□□□□ 0.29
CTDNEP1-205ENST00000570828 PHKG2P15735 406 aa16.83■□□□□ 0.28
CTDNEP1-205ENST00000570828 SMARCC1Q92922 1105 aaPredicted RBP16.83■□□□□ 0.28
CTDNEP1-205ENST00000570828 TOGARAM1Q9Y4F4 1720 aa16.82■□□□□ 0.28
CTDNEP1-205ENST00000570828 SLC16A10Q8TF71 515 aa16.82■□□□□ 0.28
CTDNEP1-205ENST00000570828 SGIP1Q9BQI5 828 aa16.82■□□□□ 0.28
CTDNEP1-205ENST00000570828 TMOD3Q9NYL9 352 aa16.82■□□□□ 0.28
CTDNEP1-205ENST00000570828 PIGBQ92521 554 aa16.81■□□□□ 0.28
CTDNEP1-205ENST00000570828 POLD1P28340 1107 aa16.8■□□□□ 0.28
CTDNEP1-205ENST00000570828 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
CTDNEP1-205ENST00000570828 ARXQ96QS3 562 aa16.8■□□□□ 0.28
CTDNEP1-205ENST00000570828 FHDC1Q9C0D6 1143 aaPredicted RBP16.8■□□□□ 0.28
CTDNEP1-205ENST00000570828 AMOTQ4VCS5 1084 aa16.79■□□□□ 0.28
CTDNEP1-205ENST00000570828 CC2D1BQ5T0F9 858 aaKnown RBP16.79■□□□□ 0.28
CTDNEP1-205ENST00000570828 HSP90AB1P08238 724 aaKnown RBP16.78■□□□□ 0.28
CTDNEP1-205ENST00000570828 ZNF530Q6P9A1 599 aaPredicted RBP16.78■□□□□ 0.28
CTDNEP1-205ENST00000570828 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
CTDNEP1-205ENST00000570828 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
CTDNEP1-205ENST00000570828 PER1O15534 1290 aaPredicted RBP16.77■□□□□ 0.28
CTDNEP1-205ENST00000570828 IL13P35225 146 aa16.77■□□□□ 0.28
CTDNEP1-205ENST00000570828 SULT6B1Q6IMI4 303 aa16.77■□□□□ 0.28
CTDNEP1-205ENST00000570828 AK7Q96M32 723 aa16.77■□□□□ 0.28
CTDNEP1-205ENST00000570828 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
CTDNEP1-205ENST00000570828 C5P01031 1676 aa16.76■□□□□ 0.27
CTDNEP1-205ENST00000570828 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
CTDNEP1-205ENST00000570828 MTHFSP49914 203 aa16.76■□□□□ 0.27
CTDNEP1-205ENST00000570828 SIK1P57059 783 aa16.76■□□□□ 0.27
CTDNEP1-205ENST00000570828 C1orf141Q5JVX7 400 aa16.76■□□□□ 0.27
CTDNEP1-205ENST00000570828 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
CTDNEP1-205ENST00000570828 KDRP35968 1356 aa16.76■□□□□ 0.27
CTDNEP1-205ENST00000570828 MAP3K5Q99683 1374 aa16.76■□□□□ 0.27
CTDNEP1-205ENST00000570828 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
CTDNEP1-205ENST00000570828 COL23A1Q86Y22 540 aaPredicted RBP16.75■□□□□ 0.27
CTDNEP1-205ENST00000570828 FLAD1Q8NFF5 587 aa16.75■□□□□ 0.27
CTDNEP1-205ENST00000570828 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
CTDNEP1-205ENST00000570828 NPC1L1Q9UHC9 1359 aa16.75■□□□□ 0.27
CTDNEP1-205ENST00000570828 ERVV-2B6SEH9 535 aa16.74■□□□□ 0.27
CTDNEP1-205ENST00000570828 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
CTDNEP1-205ENST00000570828 OTUD5Q96G74 571 aa16.74■□□□□ 0.27
CTDNEP1-205ENST00000570828 ITGB4P16144 1822 aa16.74■□□□□ 0.27
CTDNEP1-205ENST00000570828 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
CTDNEP1-205ENST00000570828 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
CTDNEP1-205ENST00000570828 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
CTDNEP1-205ENST00000570828 YY1P25490 414 aa16.72■□□□□ 0.27
CTDNEP1-205ENST00000570828 LINC00116Q8NCU8 138 aa16.72■□□□□ 0.27
CTDNEP1-205ENST00000570828 ATG3Q9NT62 314 aa16.72■□□□□ 0.27
CTDNEP1-205ENST00000570828 C4BP0C0L5 1744 aa16.72■□□□□ 0.27
CTDNEP1-205ENST00000570828 DIAPH1O60610 1272 aaKnown RBP16.71■□□□□ 0.27
CTDNEP1-205ENST00000570828 PHF14O94880 888 aa16.71■□□□□ 0.27
CTDNEP1-205ENST00000570828 ATP6V1AP38606 617 aa16.71■□□□□ 0.27
CTDNEP1-205ENST00000570828 CABP4P57796 275 aa16.71■□□□□ 0.27
CTDNEP1-205ENST00000570828 MSL1Q68DK7 614 aa16.71■□□□□ 0.27
CTDNEP1-205ENST00000570828 PHF12Q96QT6 1004 aa16.71■□□□□ 0.27
CTDNEP1-205ENST00000570828 RTN4Q9NQC3 1192 aaKnown RBP16.71■□□□□ 0.27
CTDNEP1-205ENST00000570828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.69■□□□□ 0.26
CTDNEP1-205ENST00000570828 GNPATO15228 680 aa16.69■□□□□ 0.26
CTDNEP1-205ENST00000570828 HMOX1P09601 288 aa16.69■□□□□ 0.26
CTDNEP1-205ENST00000570828 SSFA2P28290 1259 aa16.69■□□□□ 0.26
CTDNEP1-205ENST00000570828 ITPK1Q13572 414 aa16.69■□□□□ 0.26
CTDNEP1-205ENST00000570828 UTRNP46939 3433 aa16.68■□□□□ 0.26
CTDNEP1-205ENST00000570828 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
CTDNEP1-205ENST00000570828 COL24A1Q17RW2 1714 aa16.67■□□□□ 0.26
CTDNEP1-205ENST00000570828 POTEB2H3BUK9 544 aa16.67■□□□□ 0.26
CTDNEP1-205ENST00000570828 AKAP4Q5JQC9 854 aa16.67■□□□□ 0.26
CTDNEP1-205ENST00000570828 AMIGO3Q86WK7 504 aa16.67■□□□□ 0.26
CTDNEP1-205ENST00000570828 U2SURPO15042 1029 aaKnown RBP16.65■□□□□ 0.26
CTDNEP1-205ENST00000570828 GPR162Q16538 588 aa16.65■□□□□ 0.26
CTDNEP1-205ENST00000570828 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
CTDNEP1-205ENST00000570828 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
CTDNEP1-205ENST00000570828 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-205ENST00000570828 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
CTDNEP1-205ENST00000570828 SLC4A9Q96Q91 983 aa16.64■□□□□ 0.25
CTDNEP1-205ENST00000570828 GOLGB1Q14789 3259 aaKnown RBP16.64■□□□□ 0.25
CTDNEP1-205ENST00000570828 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-205ENST00000570828 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-205ENST00000570828 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
CTDNEP1-205ENST00000570828 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-205ENST00000570828 CNTNAP4Q9C0A0 1308 aa16.63■□□□□ 0.25
CTDNEP1-205ENST00000570828 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
CTDNEP1-205ENST00000570828 MTHFSDQ2M296 383 aaKnown RBP16.62■□□□□ 0.25
CTDNEP1-205ENST00000570828 SLC52A2Q9HAB3 445 aa16.62■□□□□ 0.25
CTDNEP1-205ENST00000570828 RC3H1Q5TC82 1133 aaKnown RBP16.61■□□□□ 0.25
CTDNEP1-205ENST00000570828 ZNF831Q5JPB2 1677 aa16.61■□□□□ 0.25
CTDNEP1-205ENST00000570828 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
CTDNEP1-205ENST00000570828 TRAPPC3LQ5T215 181 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms