RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 DCAF8L1A6NGE4 600 aa27.18■■□□□ 1.94
PKD1-237ENST00000569983 U2SURPO15042 1029 aaKnown RBP27.18■■□□□ 1.94
PKD1-237ENST00000569983 AKAP4Q5JQC9 854 aa27.18■■□□□ 1.94
PKD1-237ENST00000569983 LINC00116Q8NCU8 138 aa27.18■■□□□ 1.94
PKD1-237ENST00000569983 CFAP53Q96M91 514 aa27.17■■□□□ 1.94
PKD1-237ENST00000569983 ITPK1Q13572 414 aa27.16■■□□□ 1.94
PKD1-237ENST00000569983 SYT17Q9BSW7 474 aa27.16■■□□□ 1.94
PKD1-237ENST00000569983 COL24A1Q17RW2 1714 aa27.16■■□□□ 1.94
PKD1-237ENST00000569983 NFATC2IPQ8NCF5 419 aa27.15■■□□□ 1.94
PKD1-237ENST00000569983 RBM42Q9BTD8 480 aaKnown RBP27.15■■□□□ 1.94
PKD1-237ENST00000569983 SCN11AQ9UI33 1791 aa27.13■■□□□ 1.93
PKD1-237ENST00000569983 PHF14O94880 888 aa27.13■■□□□ 1.93
PKD1-237ENST00000569983 PPP2R1AP30153 589 aa27.13■■□□□ 1.93
PKD1-237ENST00000569983 MTHFSDQ2M296 383 aaKnown RBP27.13■■□□□ 1.93
PKD1-237ENST00000569983 AMIGO3Q86WK7 504 aa27.12■■□□□ 1.93
PKD1-237ENST00000569983 UBR3Q6ZT12 1888 aa27.12■■□□□ 1.93
PKD1-237ENST00000569983 MAP3K5Q99683 1374 aa27.11■■□□□ 1.93
PKD1-237ENST00000569983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.11■■□□□ 1.93
PKD1-237ENST00000569983 MSL1Q68DK7 614 aa27.11■■□□□ 1.93
PKD1-237ENST00000569983 SLC4A9Q96Q91 983 aa27.11■■□□□ 1.93
PKD1-237ENST00000569983 GNPATO15228 680 aa27.1■■□□□ 1.93
PKD1-237ENST00000569983 SSFA2P28290 1259 aa27.1■■□□□ 1.93
PKD1-237ENST00000569983 KLHL34Q8N239 644 aa27.1■■□□□ 1.93
PKD1-237ENST00000569983 ZNF831Q5JPB2 1677 aa27.1■■□□□ 1.93
PKD1-237ENST00000569983 LGR6Q9HBX8 967 aa27.09■■□□□ 1.93
PKD1-237ENST00000569983 RNMTO43148 476 aaKnown RBP27.08■■□□□ 1.93
PKD1-237ENST00000569983 SMIM5Q71RC9 77 aa27.08■■□□□ 1.93
PKD1-237ENST00000569983 SLC52A2Q9HAB3 445 aa27.08■■□□□ 1.93
PKD1-237ENST00000569983 NUDCQ9Y266 331 aa27.08■■□□□ 1.93
PKD1-237ENST00000569983 PTCD1O75127 700 aaKnown RBP27.07■■□□□ 1.92
PKD1-237ENST00000569983 MRC1P22897 1456 aa27.06■■□□□ 1.92
PKD1-237ENST00000569983 GAS2L2Q8NHY3 880 aa27.05■■□□□ 1.92
PKD1-237ENST00000569983 COL5A3P25940 1745 aaPredicted RBP27.03■■□□□ 1.92
PKD1-237ENST00000569983 RC3H1Q5TC82 1133 aaKnown RBP27.03■■□□□ 1.92
PKD1-237ENST00000569983 VIRMAQ69YN4 1812 aaKnown RBP27.03■■□□□ 1.92
PKD1-237ENST00000569983 RTCBQ9Y3I0 505 aaKnown RBP27.03■■□□□ 1.92
PKD1-237ENST00000569983 ADAMTS7Q9UKP4 1686 aa27.02■■□□□ 1.92
PKD1-237ENST00000569983 CNTNAP4Q9C0A0 1308 aa27.02■■□□□ 1.92
PKD1-237ENST00000569983 U2AF1L5P0DN76 240 aaPredicted RBP27.02■■□□□ 1.92
PKD1-237ENST00000569983 PRKAR2BP31323 418 aa27.02■■□□□ 1.92
PKD1-237ENST00000569983 U2AF1Q01081 240 aaKnown RBP eCLIP27.02■■□□□ 1.92
PKD1-237ENST00000569983 RSPH6AQ9H0K4 717 aa27.02■■□□□ 1.92
PKD1-237ENST00000569983 GNAT3A8MTJ3 354 aa27■■□□□ 1.91
PKD1-237ENST00000569983 TRAPPC3LQ5T215 181 aa26.99■■□□□ 1.91
PKD1-237ENST00000569983 SLC39A6Q13433 755 aa26.98■■□□□ 1.91
PKD1-237ENST00000569983 PHACTR3Q96KR7 559 aa26.98■■□□□ 1.91
PKD1-237ENST00000569983 RPS6KA4O75676 772 aa26.97■■□□□ 1.91
PKD1-237ENST00000569983 ADRA2BP18089 450 aa26.97■■□□□ 1.91
PKD1-237ENST00000569983 TJP1Q07157 1748 aa26.96■■□□□ 1.91
PKD1-237ENST00000569983 NLGN2Q8NFZ4 835 aa26.96■■□□□ 1.91
PKD1-237ENST00000569983 CICQ96RK0 1608 aaPredicted RBP26.96■■□□□ 1.91
PKD1-237ENST00000569983 MYH14Q7Z406 1995 aaKnown RBP26.95■■□□□ 1.91
PKD1-237ENST00000569983 FCHSD2O94868 740 aa26.95■■□□□ 1.9
PKD1-237ENST00000569983 YY1P25490 414 aa26.95■■□□□ 1.9
PKD1-237ENST00000569983 CRKLP46109 303 aaKnown RBP26.95■■□□□ 1.9
PKD1-237ENST00000569983 TEFQ10587 303 aa26.95■■□□□ 1.9
PKD1-237ENST00000569983 IL17REQ8NFR9 667 aa26.95■■□□□ 1.9
PKD1-237ENST00000569983 ARHGEF1Q92888 912 aaKnown RBP26.94■■□□□ 1.9
PKD1-237ENST00000569983 DDX10Q13206 875 aaKnown RBP26.93■■□□□ 1.9
PKD1-237ENST00000569983 GPR162Q16538 588 aa26.93■■□□□ 1.9
PKD1-237ENST00000569983 DNAJC10Q8IXB1 793 aa26.93■■□□□ 1.9
PKD1-237ENST00000569983 CD2APQ9Y5K6 639 aa26.93■■□□□ 1.9
PKD1-237ENST00000569983 KCPQ6ZWJ8 1503 aa26.93■■□□□ 1.9
PKD1-237ENST00000569983 UTRNP46939 3433 aa26.93■■□□□ 1.9
PKD1-237ENST00000569983 RFC4P35249 363 aa26.92■■□□□ 1.9
PKD1-237ENST00000569983 TTC5Q8N0Z6 440 aa26.92■■□□□ 1.9
PKD1-237ENST00000569983 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
PKD1-237ENST00000569983 CEMIPQ8WUJ3 1361 aa26.89■■□□□ 1.9
PKD1-237ENST00000569983 INTS5Q6P9B9 1019 aaKnown RBP26.89■■□□□ 1.9
PKD1-237ENST00000569983 VSIG10Q8N0Z9 540 aa26.89■■□□□ 1.9
PKD1-237ENST00000569983 NLGN1Q8N2Q7 840 aa26.89■■□□□ 1.9
PKD1-237ENST00000569983 MMP10P09238 476 aa26.88■■□□□ 1.89
PKD1-237ENST00000569983 RALBP1Q15311 655 aa26.88■■□□□ 1.89
PKD1-237ENST00000569983 CCDC87Q9NVE4 849 aa26.88■■□□□ 1.89
PKD1-237ENST00000569983 UBR2Q8IWV8 1755 aa26.88■■□□□ 1.89
PKD1-237ENST00000569983 C4AP0C0L4 1744 aa26.87■■□□□ 1.89
PKD1-237ENST00000569983 CYP19A1P11511 503 aaPredicted RBP26.87■■□□□ 1.89
PKD1-237ENST00000569983 RTF1Q92541 710 aaKnown RBP26.87■■□□□ 1.89
PKD1-237ENST00000569983 SIPA1L3O60292 1781 aaPredicted RBP26.86■■□□□ 1.89
PKD1-237ENST00000569983 GYS1P13807 737 aa26.86■■□□□ 1.89
PKD1-237ENST00000569983 ZNF790Q6PG37 636 aa26.86■■□□□ 1.89
PKD1-237ENST00000569983 NEFMP07197 916 aa26.85■■□□□ 1.89
PKD1-237ENST00000569983 GOLGB1Q14789 3259 aaKnown RBP26.83■■□□□ 1.89
PKD1-237ENST00000569983 ZNF496Q96IT1 587 aaPredicted RBP26.83■■□□□ 1.89
PKD1-237ENST00000569983 SOS1Q07889 1333 aaPredicted RBP26.83■■□□□ 1.89
PKD1-237ENST00000569983 USP42Q9H9J4 1324 aaKnown RBP26.83■■□□□ 1.89
PKD1-237ENST00000569983 BTBD11A6QL63 1104 aa26.82■■□□□ 1.88
PKD1-237ENST00000569983 MCM10Q7L590 875 aa26.82■■□□□ 1.88
PKD1-237ENST00000569983 SRP68Q9UHB9 627 aaKnown RBP26.82■■□□□ 1.88
PKD1-237ENST00000569983 HEG1Q9ULI3 1381 aa26.82■■□□□ 1.88
PKD1-237ENST00000569983 STARD3NLO95772 234 aa26.81■■□□□ 1.88
PKD1-237ENST00000569983 ZBTB1Q9Y2K1 713 aa26.81■■□□□ 1.88
PKD1-237ENST00000569983 HTATSF1O43719 755 aaKnown RBP26.8■■□□□ 1.88
PKD1-237ENST00000569983 FMNL2Q96PY5 1086 aa26.8■■□□□ 1.88
PKD1-237ENST00000569983 CHD4Q14839 1912 aa26.8■■□□□ 1.88
PKD1-237ENST00000569983 ZPR1O75312 459 aa26.79■■□□□ 1.88
PKD1-237ENST00000569983 YBX3P16989 372 aaKnown RBP eCLIP26.79■■□□□ 1.88
PKD1-237ENST00000569983 TEX13AQ9BXU3 409 aaPredicted RBP26.79■■□□□ 1.88
PKD1-237ENST00000569983 PARP3Q9Y6F1 533 aa26.79■■□□□ 1.88
PKD1-237ENST00000569983 GRIN3BO60391 1043 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms