RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 PLEKHG2Q9H7P9 1386 aa13.96□□□□□ -0.17
PDXDC1-216ENST00000569715 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.17
PDXDC1-216ENST00000569715 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.18
PDXDC1-216ENST00000569715 RGS12O14924 1447 aa13.96□□□□□ -0.18
PDXDC1-216ENST00000569715 EIF4A1P60842 406 aaKnown RBP13.95□□□□□ -0.18
PDXDC1-216ENST00000569715 NUTM2BA6NNL0 878 aaPredicted RBP13.95□□□□□ -0.18
PDXDC1-216ENST00000569715 NUTM2EB1AL46 878 aaPredicted RBP13.95□□□□□ -0.18
PDXDC1-216ENST00000569715 MS4A1P11836 297 aa13.95□□□□□ -0.18
PDXDC1-216ENST00000569715 IL2RBP14784 551 aa13.95□□□□□ -0.18
PDXDC1-216ENST00000569715 NUTM2AQ8IVF1 878 aaPredicted RBP13.95□□□□□ -0.18
PDXDC1-216ENST00000569715 ARHGAP45Q92619 1136 aa13.95□□□□□ -0.18
PDXDC1-216ENST00000569715 NRAPQ86VF7 1730 aa13.94□□□□□ -0.18
PDXDC1-216ENST00000569715 SKAP1Q86WV1 359 aa13.94□□□□□ -0.18
PDXDC1-216ENST00000569715 ABCC4O15439 1325 aa13.94□□□□□ -0.18
PDXDC1-216ENST00000569715 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
PDXDC1-216ENST00000569715 G2E3Q7L622 706 aa13.94□□□□□ -0.18
PDXDC1-216ENST00000569715 MRC1P22897 1456 aa13.94□□□□□ -0.18
PDXDC1-216ENST00000569715 PCDHB15Q9Y5E8 787 aa13.94□□□□□ -0.18
PDXDC1-216ENST00000569715 ZCRB1Q8TBF4 217 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-216ENST00000569715 SLC52A2Q9HAB3 445 aa13.93□□□□□ -0.18
PDXDC1-216ENST00000569715 IGHDP01880 384 aa13.93□□□□□ -0.18
PDXDC1-216ENST00000569715 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
PDXDC1-216ENST00000569715 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
PDXDC1-216ENST00000569715 NFATC2IPQ8NCF5 419 aa13.92□□□□□ -0.18
PDXDC1-216ENST00000569715 WNK3Q9BYP7 1800 aa13.92□□□□□ -0.18
PDXDC1-216ENST00000569715 SLC39A6Q13433 755 aa13.92□□□□□ -0.18
PDXDC1-216ENST00000569715 CERKQ8TCT0 537 aa13.92□□□□□ -0.18
PDXDC1-216ENST00000569715 DCAF5Q96JK2 942 aa13.92□□□□□ -0.18
PDXDC1-216ENST00000569715 DDX19BQ9UMR2 479 aa13.92□□□□□ -0.18
PDXDC1-216ENST00000569715 CACNA1FO60840 1977 aa13.91□□□□□ -0.18
PDXDC1-216ENST00000569715 C5P01031 1676 aa13.91□□□□□ -0.18
PDXDC1-216ENST00000569715 PRAMEF22A3QJZ6 481 aa13.91□□□□□ -0.18
PDXDC1-216ENST00000569715 API5Q9BZZ5 524 aaKnown RBP13.91□□□□□ -0.18
PDXDC1-216ENST00000569715 HDGFL1Q5TGJ6 251 aa13.91□□□□□ -0.18
PDXDC1-216ENST00000569715 TOGARAM1Q9Y4F4 1720 aa13.91□□□□□ -0.18
PDXDC1-216ENST00000569715 DISP2A7MBM2 1401 aa13.9□□□□□ -0.18
PDXDC1-216ENST00000569715 CCDC30Q5VVM6 783 aa13.9□□□□□ -0.18
PDXDC1-216ENST00000569715 CENPQQ7L2Z9 268 aaPredicted RBP13.9□□□□□ -0.18
PDXDC1-216ENST00000569715 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
PDXDC1-216ENST00000569715 EIF2S2P20042 333 aaKnown RBP13.9□□□□□ -0.18
PDXDC1-216ENST00000569715 STK31Q9BXU1 1019 aa13.9□□□□□ -0.18
PDXDC1-216ENST00000569715 TSHZ2Q9NRE2 1034 aa13.9□□□□□ -0.18
PDXDC1-216ENST00000569715 HEG1Q9ULI3 1381 aa13.9□□□□□ -0.18
PDXDC1-216ENST00000569715 SOS1Q07889 1333 aaPredicted RBP13.89□□□□□ -0.19
PDXDC1-216ENST00000569715 ZBTB40Q9NUA8 1239 aa13.89□□□□□ -0.19
PDXDC1-216ENST00000569715 HSP90AB1P08238 724 aaKnown RBP13.89□□□□□ -0.19
PDXDC1-216ENST00000569715 PTPRCP08575 1304 aa13.89□□□□□ -0.19
PDXDC1-216ENST00000569715 ZNF790Q6PG37 636 aa13.88□□□□□ -0.19
PDXDC1-216ENST00000569715 F6X3S4 739 aa13.88□□□□□ -0.19
PDXDC1-216ENST00000569715 AAMPQ13685 434 aa13.88□□□□□ -0.19
PDXDC1-216ENST00000569715 NWD2Q9ULI1 1742 aa13.88□□□□□ -0.19
PDXDC1-216ENST00000569715 GLI3P10071 1580 aa13.88□□□□□ -0.19
PDXDC1-216ENST00000569715 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
PDXDC1-216ENST00000569715 FLIIQ13045 1269 aa13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 ZBTB7BO15156 539 aaPredicted RBP13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 HOXB7P09629 217 aa13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 CABP4P57796 275 aa13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 CHPF2Q9P2E5 772 aa13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 SLIT2O94813 1529 aa13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 ANXA1P04083 346 aa13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 MYT1Q01538 1121 aa13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 PHAXQ9H814 394 aaKnown RBP13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 JCADQ9P266 1359 aa13.87□□□□□ -0.19
PDXDC1-216ENST00000569715 C1orf115Q9H7X2 142 aa13.86□□□□□ -0.19
PDXDC1-216ENST00000569715 NKX1-1Q15270 411 aaPredicted RBP13.86□□□□□ -0.19
PDXDC1-216ENST00000569715 INTS3Q68E01 1043 aaKnown RBP13.86□□□□□ -0.19
PDXDC1-216ENST00000569715 ZNF496Q96IT1 587 aaPredicted RBP13.86□□□□□ -0.19
PDXDC1-216ENST00000569715 LRP6O75581 1613 aa13.85□□□□□ -0.19
PDXDC1-216ENST00000569715 PAPPAQ13219 1627 aa13.85□□□□□ -0.19
PDXDC1-216ENST00000569715 SPATA31A1Q5TZJ5 1347 aa13.85□□□□□ -0.19
PDXDC1-216ENST00000569715 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
PDXDC1-216ENST00000569715 UBR2Q8IWV8 1755 aa13.85□□□□□ -0.19
PDXDC1-216ENST00000569715 PROSER3Q2NL68 480 aa13.84□□□□□ -0.19
PDXDC1-216ENST00000569715 SLC4A10Q6U841 1118 aa13.84□□□□□ -0.19
PDXDC1-216ENST00000569715 N4BP2Q86UW6 1770 aaPredicted RBP13.84□□□□□ -0.19
PDXDC1-216ENST00000569715 ITGB4P16144 1822 aa13.84□□□□□ -0.19
PDXDC1-216ENST00000569715 C8orf37Q96NL8 207 aa13.83□□□□□ -0.19
PDXDC1-216ENST00000569715 ERVV-2B6SEH9 535 aa13.83□□□□□ -0.2
PDXDC1-216ENST00000569715 TTC5Q8N0Z6 440 aa13.83□□□□□ -0.2
PDXDC1-216ENST00000569715 TNS2Q63HR2 1409 aa13.83□□□□□ -0.2
PDXDC1-216ENST00000569715 HSPA1LP34931 641 aa13.82□□□□□ -0.2
PDXDC1-216ENST00000569715 SPATA31A5Q5VU36 1347 aa13.82□□□□□ -0.2
PDXDC1-216ENST00000569715 SPATA31A7Q8IWB4 1347 aa13.82□□□□□ -0.2
PDXDC1-216ENST00000569715 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
PDXDC1-216ENST00000569715 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
PDXDC1-216ENST00000569715 LAMB4A4D0S4 1761 aa13.82□□□□□ -0.2
PDXDC1-216ENST00000569715 MEIS3Q99687 375 aa13.81□□□□□ -0.2
PDXDC1-216ENST00000569715 RWDD1Q9H446 243 aaPredicted RBP13.81□□□□□ -0.2
PDXDC1-216ENST00000569715 BCL9LQ86UU0 1499 aa13.81□□□□□ -0.2
PDXDC1-216ENST00000569715 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
PDXDC1-216ENST00000569715 DBF4Q9UBU7 674 aaPredicted RBP13.81□□□□□ -0.2
PDXDC1-216ENST00000569715 HDAC1Q13547 482 aaPredicted RBP13.8□□□□□ -0.2
PDXDC1-216ENST00000569715 PDIA6Q15084 440 aa13.8□□□□□ -0.2
PDXDC1-216ENST00000569715 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
PDXDC1-216ENST00000569715 FMNL2Q96PY5 1086 aa13.8□□□□□ -0.2
PDXDC1-216ENST00000569715 USP16Q9Y5T5 823 aa13.8□□□□□ -0.2
PDXDC1-216ENST00000569715 DOT1LQ8TEK3 1739 aa13.8□□□□□ -0.2
PDXDC1-216ENST00000569715 EXOC5O00471 708 aa13.8□□□□□ -0.2
PDXDC1-216ENST00000569715 SIRT2Q8IXJ6 389 aa13.8□□□□□ -0.2
PDXDC1-216ENST00000569715 PXDNLA1KZ92 1463 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms