RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 RRAGCQ9HB90 399 aa12.18□□□□□ -0.46
SMG1-216ENST00000569122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.465e-9■■□□□ 13.1
SMG1-216ENST00000569122 C10orf71Q711Q0 1435 aa12.18□□□□□ -0.46
SMG1-216ENST00000569122 INSRP06213 1382 aa12.18□□□□□ -0.46
SMG1-216ENST00000569122 ZC3H4Q9UPT8 1303 aaKnown RBP12.17□□□□□ -0.46
SMG1-216ENST00000569122 RFC4P35249 363 aa12.17□□□□□ -0.46
SMG1-216ENST00000569122 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
SMG1-216ENST00000569122 RNF181Q9P0P0 153 aa12.17□□□□□ -0.46
SMG1-216ENST00000569122 C5P01031 1676 aa12.16□□□□□ -0.46
SMG1-216ENST00000569122 HSPA1AP0DMV8 641 aaKnown RBP12.16□□□□□ -0.46
SMG1-216ENST00000569122 HSPA1BP0DMV9 641 aaKnown RBP12.16□□□□□ -0.46
SMG1-216ENST00000569122 FBLN1P23142 703 aa12.16□□□□□ -0.46
SMG1-216ENST00000569122 NEUROD1Q13562 356 aa12.16□□□□□ -0.46
SMG1-216ENST00000569122 SMIM5Q71RC9 77 aa12.16□□□□□ -0.46
SMG1-216ENST00000569122 C4BP0C0L5 1744 aa12.16□□□□□ -0.46
SMG1-216ENST00000569122 VEGFAP15692 232 aaPredicted RBP12.15□□□□□ -0.46
SMG1-216ENST00000569122 ITPK1Q13572 414 aa12.15□□□□□ -0.46
SMG1-216ENST00000569122 HSP90AB2PQ58FF8 381 aa12.15□□□□□ -0.46
SMG1-216ENST00000569122 IFNL2Q8IZJ0 200 aa12.15□□□□□ -0.46
SMG1-216ENST00000569122 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
SMG1-216ENST00000569122 FLT4P35916 1363 aa12.15□□□□□ -0.46
SMG1-216ENST00000569122 FYB1O15117 783 aa12.14□□□□□ -0.47
SMG1-216ENST00000569122 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
SMG1-216ENST00000569122 SIN3AQ96ST3 1273 aa12.14□□□□□ -0.47
SMG1-216ENST00000569122 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
SMG1-216ENST00000569122 GYS1P13807 737 aa12.13□□□□□ -0.47
SMG1-216ENST00000569122 KCNA3P22001 575 aa12.13□□□□□ -0.47
SMG1-216ENST00000569122 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
SMG1-216ENST00000569122 RPS6KA4O75676 772 aa12.12□□□□□ -0.47
SMG1-216ENST00000569122 GGNBP2Q9H3C7 697 aa12.12□□□□□ -0.47
SMG1-216ENST00000569122 ATG3Q9NT62 314 aa12.12□□□□□ -0.47
SMG1-216ENST00000569122 GLTPD2A6NH11 291 aa12.11□□□□□ -0.47
SMG1-216ENST00000569122 ERVV-2B6SEH9 535 aa12.11□□□□□ -0.47
SMG1-216ENST00000569122 HSP90AB1P08238 724 aaKnown RBP12.11□□□□□ -0.47
SMG1-216ENST00000569122 PCNTO95613 3336 aa12.11□□□□□ -0.47
SMG1-216ENST00000569122 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
SMG1-216ENST00000569122 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
SMG1-216ENST00000569122 PHKG2P15735 406 aa12.1□□□□□ -0.47
SMG1-216ENST00000569122 LMNB1P20700 586 aa12.1□□□□□ -0.47
SMG1-216ENST00000569122 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
SMG1-216ENST00000569122 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
SMG1-216ENST00000569122 SLC34A2O95436 690 aa12.09□□□□□ -0.47
SMG1-216ENST00000569122 CDCA8Q53HL2 280 aa12.09□□□□□ -0.47
SMG1-216ENST00000569122 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
SMG1-216ENST00000569122 TESK2Q96S53 571 aa12.08□□□□□ -0.48
SMG1-216ENST00000569122 PRDM10Q9NQV6 1147 aa12.08□□□□□ -0.48
SMG1-216ENST00000569122 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
SMG1-216ENST00000569122 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
SMG1-216ENST00000569122 ST20-MTHFSA0A0A6YYL1 179 aa12.07□□□□□ -0.48
SMG1-216ENST00000569122 PPM1GO15355 546 aaPredicted RBP12.07□□□□□ -0.48
SMG1-216ENST00000569122 UBR3Q6ZT12 1888 aa12.07□□□□□ -0.48
SMG1-216ENST00000569122 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
SMG1-216ENST00000569122 AIDAQ96BJ3 306 aa12.06□□□□□ -0.48
SMG1-216ENST00000569122 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
SMG1-216ENST00000569122 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
SMG1-216ENST00000569122 ZPR1O75312 459 aa12.05□□□□□ -0.48
SMG1-216ENST00000569122 CABP4P57796 275 aa12.05□□□□□ -0.48
SMG1-216ENST00000569122 EYA1Q99502 592 aa12.05□□□□□ -0.48
SMG1-216ENST00000569122 KDRP35968 1356 aa12.05□□□□□ -0.48
SMG1-216ENST00000569122 NCAPD2Q15021 1401 aa12.04□□□□□ -0.48
SMG1-216ENST00000569122 CHRNA5P30532 468 aa12.04□□□□□ -0.48
SMG1-216ENST00000569122 CTCFP49711 727 aaPredicted RBP12.04□□□□□ -0.48
SMG1-216ENST00000569122 FKBP8Q14318 412 aa12.04□□□□□ -0.48
SMG1-216ENST00000569122 TTLL6Q8N841 843 aa12.04□□□□□ -0.48
SMG1-216ENST00000569122 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
SMG1-216ENST00000569122 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
SMG1-216ENST00000569122 KIF13BQ9NQT8 1826 aa12.04□□□□□ -0.48
SMG1-216ENST00000569122 TM4SF1P30408 202 aa12.03□□□□□ -0.48
SMG1-216ENST00000569122 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
SMG1-216ENST00000569122 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
SMG1-216ENST00000569122 PDZRN3Q9UPQ7 1066 aa12.03□□□□□ -0.48
SMG1-216ENST00000569122 POLRMTO00411 1230 aaKnown RBP12.02□□□□□ -0.49
SMG1-216ENST00000569122 CRKLP46109 303 aaKnown RBP12.02□□□□□ -0.49
SMG1-216ENST00000569122 DDR1Q08345 913 aa12.02□□□□□ -0.49
SMG1-216ENST00000569122 AMOTQ4VCS5 1084 aa12.02□□□□□ -0.49
SMG1-216ENST00000569122 CHADLQ6NUI6 762 aa12.02□□□□□ -0.49
SMG1-216ENST00000569122 C4AP0C0L4 1744 aa12.02□□□□□ -0.49
SMG1-216ENST00000569122 KDM6AO15550 1401 aaPredicted RBP12.02□□□□□ -0.49
SMG1-216ENST00000569122 H0YIN7 160 aa12.01□□□□□ -0.49
SMG1-216ENST00000569122 RASSF7Q02833 373 aa12.01□□□□□ -0.49
SMG1-216ENST00000569122 SRP68Q9UHB9 627 aaKnown RBP12.01□□□□□ -0.49
SMG1-216ENST00000569122 MKRN1Q9UHC7 482 aaKnown RBP12.01□□□□□ -0.49
SMG1-216ENST00000569122 TNRC6CQ9HCJ0 1690 aaKnown RBP12□□□□□ -0.49
SMG1-216ENST00000569122 MAP2P11137 1827 aaKnown RBP12□□□□□ -0.49
SMG1-216ENST00000569122 PTCD1O75127 700 aaKnown RBP12□□□□□ -0.49
SMG1-216ENST00000569122 MTHFSP49914 203 aa12□□□□□ -0.49
SMG1-216ENST00000569122 RGPD2P0DJD1 1756 aa12□□□□□ -0.49
SMG1-216ENST00000569122 N4BP2Q86UW6 1770 aaPredicted RBP12□□□□□ -0.49
SMG1-216ENST00000569122 IQCA1LA6NCM1 817 aa11.99□□□□□ -0.49
SMG1-216ENST00000569122 FOXN1O15353 648 aa11.99□□□□□ -0.49
SMG1-216ENST00000569122 ERFEQ4G0M1 354 aa11.99□□□□□ -0.49
SMG1-216ENST00000569122 C1orf141Q5JVX7 400 aa11.99□□□□□ -0.49
SMG1-216ENST00000569122 PKD1L3Q7Z443 1732 aa11.98□□□□□ -0.49
SMG1-216ENST00000569122 KIAA1551Q9HCM1 1747 aa11.98□□□□□ -0.49
SMG1-216ENST00000569122 CNTNAP1P78357 1384 aa11.98□□□□□ -0.49
SMG1-216ENST00000569122 USPL1Q5W0Q7 1092 aa11.98□□□□□ -0.49
SMG1-216ENST00000569122 C2CD5Q86YS7 1000 aa11.98□□□□□ -0.49
SMG1-216ENST00000569122 ITGB4P16144 1822 aa11.97□□□□□ -0.49
SMG1-216ENST00000569122 POTECB2RU33 542 aa11.97□□□□□ -0.49
SMG1-216ENST00000569122 ZNF530Q6P9A1 599 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms