RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 NUDCQ9Y266 331 aa22.96■■□□□ 1.27
KNOP1-205ENST00000568230 COL24A1Q17RW2 1714 aa22.96■■□□□ 1.27
KNOP1-205ENST00000568230 RSPH6AQ9H0K4 717 aa22.95■■□□□ 1.26
KNOP1-205ENST00000568230 UBR3Q6ZT12 1888 aa22.94■■□□□ 1.26
KNOP1-205ENST00000568230 SLC16A10Q8TF71 515 aa22.94■■□□□ 1.26
KNOP1-205ENST00000568230 SGIP1Q9BQI5 828 aa22.94■■□□□ 1.26
KNOP1-205ENST00000568230 ATF5Q9Y2D1 282 aaPredicted RBP22.94■■□□□ 1.26
KNOP1-205ENST00000568230 ITPK1Q13572 414 aa22.93■■□□□ 1.26
KNOP1-205ENST00000568230 NFATC2IPQ8NCF5 419 aa22.93■■□□□ 1.26
KNOP1-205ENST00000568230 PPP1R1BQ9UD71 204 aaPredicted RBP22.93■■□□□ 1.26
KNOP1-205ENST00000568230 CICQ96RK0 1608 aaPredicted RBP22.92■■□□□ 1.26
KNOP1-205ENST00000568230 PRKAR2BP31323 418 aa22.92■■□□□ 1.26
KNOP1-205ENST00000568230 RALBP1Q15311 655 aa22.92■■□□□ 1.26
KNOP1-205ENST00000568230 LINC00116Q8NCU8 138 aa22.92■■□□□ 1.26
KNOP1-205ENST00000568230 GAS2L2Q8NHY3 880 aa22.92■■□□□ 1.26
KNOP1-205ENST00000568230 COL5A3P25940 1745 aaPredicted RBP22.92■■□□□ 1.26
KNOP1-205ENST00000568230 MAP3K5Q99683 1374 aa22.91■■□□□ 1.26
KNOP1-205ENST00000568230 RNMTO43148 476 aaKnown RBP22.91■■□□□ 1.26
KNOP1-205ENST00000568230 U2AF1L5P0DN76 240 aaPredicted RBP22.91■■□□□ 1.26
KNOP1-205ENST00000568230 ATP6V1AP38606 617 aa22.91■■□□□ 1.26
KNOP1-205ENST00000568230 U2AF1Q01081 240 aaKnown RBP eCLIP22.91■■□□□ 1.26
KNOP1-205ENST00000568230 SLC4A9Q96Q91 983 aa22.91■■□□□ 1.26
KNOP1-205ENST00000568230 SLC52A2Q9HAB3 445 aa22.91■■□□□ 1.26
KNOP1-205ENST00000568230 LGR6Q9HBX8 967 aa22.91■■□□□ 1.26
KNOP1-205ENST00000568230 COL23A1Q86Y22 540 aaPredicted RBP22.89■■□□□ 1.26
KNOP1-205ENST00000568230 PHACTR3Q96KR7 559 aa22.89■■□□□ 1.26
KNOP1-205ENST00000568230 AK7Q96M32 723 aa22.89■■□□□ 1.26
KNOP1-205ENST00000568230 FCHSD2O94868 740 aa22.88■■□□□ 1.25
KNOP1-205ENST00000568230 FLAD1Q8NFF5 587 aa22.88■■□□□ 1.25
KNOP1-205ENST00000568230 AMIGO3Q86WK7 504 aa22.87■■□□□ 1.25
KNOP1-205ENST00000568230 RBM42Q9BTD8 480 aaKnown RBP22.87■■□□□ 1.25
KNOP1-205ENST00000568230 TJP1Q07157 1748 aa22.87■■□□□ 1.25
KNOP1-205ENST00000568230 SIPA1L3O60292 1781 aaPredicted RBP22.87■■□□□ 1.25
KNOP1-205ENST00000568230 GNAT3A8MTJ3 354 aa22.86■■□□□ 1.25
KNOP1-205ENST00000568230 KCPQ6ZWJ8 1503 aa22.85■■□□□ 1.25
KNOP1-205ENST00000568230 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
KNOP1-205ENST00000568230 SSFA2P28290 1259 aa22.84■■□□□ 1.25
KNOP1-205ENST00000568230 UTRNP46939 3433 aa22.84■■□□□ 1.25
KNOP1-205ENST00000568230 CEMIPQ8WUJ3 1361 aa22.84■■□□□ 1.25
KNOP1-205ENST00000568230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.83■■□□□ 1.25
KNOP1-205ENST00000568230 GNPATO15228 680 aa22.83■■□□□ 1.25
KNOP1-205ENST00000568230 PTCD1O75127 700 aaKnown RBP22.83■■□□□ 1.25
KNOP1-205ENST00000568230 IL17REQ8NFR9 667 aa22.83■■□□□ 1.25
KNOP1-205ENST00000568230 CNTNAP4Q9C0A0 1308 aa22.83■■□□□ 1.25
KNOP1-205ENST00000568230 MYH14Q7Z406 1995 aaKnown RBP22.83■■□□□ 1.25
KNOP1-205ENST00000568230 MSH5O43196 834 aa22.82■■□□□ 1.24
KNOP1-205ENST00000568230 ARXQ96QS3 562 aa22.82■■□□□ 1.24
KNOP1-205ENST00000568230 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
KNOP1-205ENST00000568230 RC3H1Q5TC82 1133 aaKnown RBP22.82■■□□□ 1.24
KNOP1-205ENST00000568230 PHF14O94880 888 aa22.81■■□□□ 1.24
KNOP1-205ENST00000568230 POLD1P28340 1107 aa22.81■■□□□ 1.24
KNOP1-205ENST00000568230 GOLGB1Q14789 3259 aaKnown RBP22.8■■□□□ 1.24
KNOP1-205ENST00000568230 FHDC1Q9C0D6 1143 aaPredicted RBP22.8■■□□□ 1.24
KNOP1-205ENST00000568230 TEFQ10587 303 aa22.79■■□□□ 1.24
KNOP1-205ENST00000568230 SLC39A6Q13433 755 aa22.79■■□□□ 1.24
KNOP1-205ENST00000568230 SMIM5Q71RC9 77 aa22.79■■□□□ 1.24
KNOP1-205ENST00000568230 MSL1Q68DK7 614 aa22.78■■□□□ 1.24
KNOP1-205ENST00000568230 PLEKHF1Q96S99 279 aa22.77■■□□□ 1.24
KNOP1-205ENST00000568230 SYT17Q9BSW7 474 aa22.77■■□□□ 1.24
KNOP1-205ENST00000568230 RTCBQ9Y3I0 505 aaKnown RBP22.77■■□□□ 1.24
KNOP1-205ENST00000568230 C4AP0C0L4 1744 aa22.76■■□□□ 1.23
KNOP1-205ENST00000568230 ADRA2BP18089 450 aa22.76■■□□□ 1.23
KNOP1-205ENST00000568230 CRKLP46109 303 aaKnown RBP22.76■■□□□ 1.23
KNOP1-205ENST00000568230 PRKRIP1Q9H875 184 aaPredicted RBP22.76■■□□□ 1.23
KNOP1-205ENST00000568230 DLG5Q8TDM6 1919 aa22.75■■□□□ 1.23
KNOP1-205ENST00000568230 HTATSF1O43719 755 aaKnown RBP22.75■■□□□ 1.23
KNOP1-205ENST00000568230 VSIG10Q8N0Z9 540 aa22.75■■□□□ 1.23
KNOP1-205ENST00000568230 RPS6KA4O75676 772 aa22.74■■□□□ 1.23
KNOP1-205ENST00000568230 DNAJC10Q8IXB1 793 aa22.74■■□□□ 1.23
KNOP1-205ENST00000568230 TTC5Q8N0Z6 440 aa22.74■■□□□ 1.23
KNOP1-205ENST00000568230 NEFMP07197 916 aa22.73■■□□□ 1.23
KNOP1-205ENST00000568230 TRAPPC3LQ5T215 181 aa22.73■■□□□ 1.23
KNOP1-205ENST00000568230 ZNF790Q6PG37 636 aa22.73■■□□□ 1.23
KNOP1-205ENST00000568230 RTF1Q92541 710 aaKnown RBP22.73■■□□□ 1.23
KNOP1-205ENST00000568230 INTS5Q6P9B9 1019 aaKnown RBP22.72■■□□□ 1.23
KNOP1-205ENST00000568230 PNNQ9H307 717 aaKnown RBP22.72■■□□□ 1.23
KNOP1-205ENST00000568230 CYP19A1P11511 503 aaPredicted RBP22.71■■□□□ 1.23
KNOP1-205ENST00000568230 MCM10Q7L590 875 aa22.71■■□□□ 1.23
KNOP1-205ENST00000568230 ARHGEF1Q92888 912 aaKnown RBP22.7■■□□□ 1.22
KNOP1-205ENST00000568230 ZNF496Q96IT1 587 aaPredicted RBP22.7■■□□□ 1.22
KNOP1-205ENST00000568230 CCDC87Q9NVE4 849 aa22.7■■□□□ 1.22
KNOP1-205ENST00000568230 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
KNOP1-205ENST00000568230 MAPK8IP3Q9UPT6 1336 aa22.7■■□□□ 1.22
KNOP1-205ENST00000568230 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
KNOP1-205ENST00000568230 BTBD11A6QL63 1104 aa22.69■■□□□ 1.22
KNOP1-205ENST00000568230 NFE2L2Q16236 605 aa22.69■■□□□ 1.22
KNOP1-205ENST00000568230 DCTN1Q14203 1278 aa22.68■■□□□ 1.22
KNOP1-205ENST00000568230 SOS1Q07889 1333 aaPredicted RBP22.68■■□□□ 1.22
KNOP1-205ENST00000568230 RFC4P35249 363 aa22.66■■□□□ 1.22
KNOP1-205ENST00000568230 KLHL34Q8N239 644 aa22.66■■□□□ 1.22
KNOP1-205ENST00000568230 FMNL2Q96PY5 1086 aa22.66■■□□□ 1.22
KNOP1-205ENST00000568230 GYS1P13807 737 aa22.65■■□□□ 1.22
KNOP1-205ENST00000568230 ZBTB1Q9Y2K1 713 aa22.65■■□□□ 1.22
KNOP1-205ENST00000568230 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
KNOP1-205ENST00000568230 KCNQ3O43525 872 aa22.64■■□□□ 1.22
KNOP1-205ENST00000568230 STARD3NLO95772 234 aa22.64■■□□□ 1.22
KNOP1-205ENST00000568230 NLGN1Q8N2Q7 840 aa22.64■■□□□ 1.22
KNOP1-205ENST00000568230 KDM3BQ7LBC6 1761 aa22.64■■□□□ 1.21
KNOP1-205ENST00000568230 DCAF8L1A6NGE4 600 aa22.63■■□□□ 1.21
KNOP1-205ENST00000568230 NLGN2Q8NFZ4 835 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms