RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 RBM10P98175 930 aaKnown RBP6.76□□□□□ -1.33
LINC01541-202ENST00000568095 A0A0U1RQG5 324 aaPredicted RBP6.76□□□□□ -1.33
LINC01541-202ENST00000568095 MFAP1P55081 439 aaKnown RBP6.76□□□□□ -1.33
LINC01541-202ENST00000568095 NME9Q86XW9 330 aa6.76□□□□□ -1.33
LINC01541-202ENST00000568095 KCNV2Q8TDN2 545 aa6.76□□□□□ -1.33
LINC01541-202ENST00000568095 KIF24Q5T7B8 1368 aa6.76□□□□□ -1.33
LINC01541-202ENST00000568095 HSP90AB1P08238 724 aaKnown RBP6.76□□□□□ -1.33
LINC01541-202ENST00000568095 NECTIN2Q92692 538 aa6.76□□□□□ -1.33
LINC01541-202ENST00000568095 RUNDC1Q96C34 613 aa6.76□□□□□ -1.33
LINC01541-202ENST00000568095 GGNBP2Q9H3C7 697 aa6.76□□□□□ -1.33
LINC01541-202ENST00000568095 ZRANB1Q9UGI0 708 aa6.76□□□□□ -1.33
LINC01541-202ENST00000568095 CYP2E1P05181 493 aaPredicted RBP6.75□□□□□ -1.33
LINC01541-202ENST00000568095 CANXP27824 592 aaKnown RBP6.75□□□□□ -1.33
LINC01541-202ENST00000568095 MORC1Q86VD1 984 aa6.75□□□□□ -1.33
LINC01541-202ENST00000568095 POLKQ9UBT6 870 aa6.75□□□□□ -1.33
LINC01541-202ENST00000568095 ROBO1Q9Y6N7 1651 aa6.75□□□□□ -1.33
LINC01541-202ENST00000568095 DMTNQ08495 405 aa6.75□□□□□ -1.33
LINC01541-202ENST00000568095 PLEKHF1Q96S99 279 aa6.75□□□□□ -1.33
LINC01541-202ENST00000568095 SIPA1L3O60292 1781 aaPredicted RBP6.75□□□□□ -1.33
LINC01541-202ENST00000568095 KIF16BQ96L93 1317 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 MSNP26038 577 aaKnown RBP6.74□□□□□ -1.33
LINC01541-202ENST00000568095 NUCB1Q02818 461 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 CSPP1Q1MSJ5 1256 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 WDR70Q9NW82 654 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 WNK3Q9BYP7 1800 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 MTHFSP49914 203 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 ZKSCAN5Q9Y2L8 839 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 SHANK3Q9BYB0 1731 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 SBNO1A3KN83 1393 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 RTL1A6NKG5 1358 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 CD2BP2O95400 341 aaKnown RBP6.74□□□□□ -1.33
LINC01541-202ENST00000568095 BAG4O95429 457 aaKnown RBP6.74□□□□□ -1.33
LINC01541-202ENST00000568095 BMP2KLQ5H9B9 411 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 C19orf44Q9H6X5 657 aa6.74□□□□□ -1.33
LINC01541-202ENST00000568095 PKD1L3Q7Z443 1732 aa6.73□□□□□ -1.33
LINC01541-202ENST00000568095 COL16A1Q07092 1604 aaPredicted RBP6.73□□□□□ -1.33
LINC01541-202ENST00000568095 UQCRHLA0A096LP55 91 aa6.73□□□□□ -1.33
LINC01541-202ENST00000568095 K7ELQ4 463 aaPredicted RBP6.73□□□□□ -1.33
LINC01541-202ENST00000568095 APBB1O00213 710 aa6.73□□□□□ -1.33
LINC01541-202ENST00000568095 UQCRHP07919 91 aa6.73□□□□□ -1.33
LINC01541-202ENST00000568095 ZKSCAN2Q63HK3 967 aa6.73□□□□□ -1.33
LINC01541-202ENST00000568095 DZIP1LQ8IYY4 767 aaKnown RBP6.73□□□□□ -1.33
LINC01541-202ENST00000568095 CCDC94Q9BW85 323 aaPredicted RBP6.73□□□□□ -1.33
LINC01541-202ENST00000568095 KDRP35968 1356 aa6.73□□□□□ -1.33
LINC01541-202ENST00000568095 ZNF335Q9H4Z2 1342 aaPredicted RBP6.73□□□□□ -1.33
LINC01541-202ENST00000568095 ZSCAN20P17040 1043 aaPredicted RBP6.73□□□□□ -1.33
LINC01541-202ENST00000568095 SASS6Q6UVJ0 657 aa6.73□□□□□ -1.33
LINC01541-202ENST00000568095 R3HCC1Q9Y3T6 440 aaKnown RBP6.73□□□□□ -1.33
LINC01541-202ENST00000568095 SSFA2P28290 1259 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 IL13P35225 146 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 GTF2F1P35269 517 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC01541-202ENST00000568095 ZSCAN23Q3MJ62 389 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 RNF25Q96BH1 459 aaPredicted RBP6.72□□□□□ -1.33
LINC01541-202ENST00000568095 RBM33Q96EV2 1170 aaKnown RBP6.72□□□□□ -1.33
LINC01541-202ENST00000568095 ZBTB40Q9NUA8 1239 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 LMBRD1Q9NUN5 540 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 PHF8Q9UPP1 1060 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 PLCH1Q4KWH8 1693 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC01541-202ENST00000568095 TCP11L2Q8N4U5 519 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 RBSNQ9H1K0 784 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 RYDENQ9NUL5 291 aaKnown RBP6.72□□□□□ -1.33
LINC01541-202ENST00000568095 DDX19BQ9UMR2 479 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 PARP4Q9UKK3 1724 aaKnown RBP6.72□□□□□ -1.33
LINC01541-202ENST00000568095 TNS3Q68CZ2 1445 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 GAS2L2Q8NHY3 880 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 ANP32BQ92688 251 aaKnown RBP6.72□□□□□ -1.33
LINC01541-202ENST00000568095 FAM13BQ9NYF5 915 aa6.72□□□□□ -1.33
LINC01541-202ENST00000568095 FGD1P98174 961 aa6.71□□□□□ -1.34
LINC01541-202ENST00000568095 ARHGEF10O15013 1369 aa6.71□□□□□ -1.34
LINC01541-202ENST00000568095 NRAPQ86VF7 1730 aa6.71□□□□□ -1.34
LINC01541-202ENST00000568095 GOLGA6L22H0YM25 854 aa6.71□□□□□ -1.34
LINC01541-202ENST00000568095 HMGB1P09429 215 aaKnown RBP6.71□□□□□ -1.34
LINC01541-202ENST00000568095 TRIM27P14373 513 aa6.71□□□□□ -1.34
LINC01541-202ENST00000568095 FBLN1P23142 703 aa6.71□□□□□ -1.34
LINC01541-202ENST00000568095 KCTD17Q8N5Z5 321 aa6.71□□□□□ -1.34
LINC01541-202ENST00000568095 ORAI2Q96SN7 254 aa6.71□□□□□ -1.34
LINC01541-202ENST00000568095 EMILIN1Q9Y6C2 1016 aa6.71□□□□□ -1.34
LINC01541-202ENST00000568095 MSH6P52701 1360 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 PROSER2Q86WR7 435 aaPredicted RBP6.7□□□□□ -1.34
LINC01541-202ENST00000568095 GTPBP4Q9BZE4 634 aaKnown RBP6.7□□□□□ -1.34
LINC01541-202ENST00000568095 KDM3BQ7LBC6 1761 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 FLT4P35916 1363 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 N4BP2Q86UW6 1770 aaPredicted RBP6.7□□□□□ -1.34
LINC01541-202ENST00000568095 XPCQ01831 940 aaPredicted RBP6.7□□□□□ -1.34
LINC01541-202ENST00000568095 MYRIPQ8NFW9 859 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 COG3Q96JB2 828 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 DDX49Q9Y6V7 483 aaKnown RBP6.7□□□□□ -1.34
LINC01541-202ENST00000568095 AK9Q5TCS8 1911 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 NUTM2FA1L443 756 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 ATF7IPQ6VMQ6 1270 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 CHD1LQ86WJ1 897 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 CCDC39Q9UFE4 941 aa6.7□□□□□ -1.34
LINC01541-202ENST00000568095 IL16Q14005 1332 aa6.69□□□□□ -1.34
LINC01541-202ENST00000568095 MAP3K19Q56UN5 1328 aa6.69□□□□□ -1.34
LINC01541-202ENST00000568095 PRIM1P49642 420 aaKnown RBP6.69□□□□□ -1.34
LINC01541-202ENST00000568095 NUCB2P80303 420 aa6.69□□□□□ -1.34
LINC01541-202ENST00000568095 LRSAM1Q6UWE0 723 aa6.69□□□□□ -1.34
LINC01541-202ENST00000568095 SOS2Q07890 1332 aaPredicted RBP6.69□□□□□ -1.34
LINC01541-202ENST00000568095 KIF20AO95235 890 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms