RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 C3P01024 1663 aa8.05□□□□□ -1.12
SF3B3-210ENST00000567654 NBPF1Q3BBV0 1214 aa8.05□□□□□ -1.12
SF3B3-210ENST00000567654 SLC6A16Q9GZN6 736 aa8.05□□□□□ -1.12
SF3B3-210ENST00000567654 SETD1AO15047 1707 aaKnown RBP8.05□□□□□ -1.12
SF3B3-210ENST00000567654 GPRASP1Q5JY77 1395 aa8.05□□□□□ -1.12
SF3B3-210ENST00000567654 NRXN1Q9ULB1 1477 aa8.05□□□□□ -1.12
SF3B3-210ENST00000567654 SPATA31D1Q6ZQQ2 1576 aa8.05□□□□□ -1.12
SF3B3-210ENST00000567654 MYOM1P52179 1685 aa8.05□□□□□ -1.12
SF3B3-210ENST00000567654 WASHC2CQ9Y4E1 1318 aa8.04□□□□□ -1.12
SF3B3-210ENST00000567654 MYO3AQ8NEV4 1616 aa8.04□□□□□ -1.12
SF3B3-210ENST00000567654 ARHGEF28Q8N1W1 1705 aaKnown RBP8.04□□□□□ -1.12
SF3B3-210ENST00000567654 PER1O15534 1290 aaPredicted RBP8.04□□□□□ -1.12
SF3B3-210ENST00000567654 AP1G2O75843 785 aa8.04□□□□□ -1.12
SF3B3-210ENST00000567654 CTDSPL2Q05D32 466 aa8.04□□□□□ -1.12
SF3B3-210ENST00000567654 PPP2R2DQ66LE6 453 aa8.04□□□□□ -1.12
SF3B3-210ENST00000567654 ERVK-7P63135 1459 aa8.04□□□□□ -1.12
SF3B3-210ENST00000567654 QRICH2Q9H0J4 1663 aa8.03□□□□□ -1.12
SF3B3-210ENST00000567654 ROCK2O75116 1388 aaKnown RBP8.03□□□□□ -1.12
SF3B3-210ENST00000567654 PPP1R18Q6NYC8 613 aa8.03□□□□□ -1.12
SF3B3-210ENST00000567654 KIF7Q2M1P5 1343 aa8.03□□□□□ -1.12
SF3B3-210ENST00000567654 MSS51Q4VC12 460 aa8.02□□□□□ -1.13
SF3B3-210ENST00000567654 CARD11Q9BXL7 1154 aa8.02□□□□□ -1.13
SF3B3-210ENST00000567654 UBR1Q8IWV7 1749 aa8.02□□□□□ -1.13
SF3B3-210ENST00000567654 SETBP1Q9Y6X0 1596 aa8.01□□□□□ -1.13
SF3B3-210ENST00000567654 SPDYE5A6NIY4 337 aa8.01□□□□□ -1.13
SF3B3-210ENST00000567654 JUNDP17535 347 aa8.01□□□□□ -1.13
SF3B3-210ENST00000567654 LRRN4Q8WUT4 740 aa8.01□□□□□ -1.13
SF3B3-210ENST00000567654 ASXL1Q8IXJ9 1541 aa8.01□□□□□ -1.13
SF3B3-210ENST00000567654 ADGRB1O14514 1584 aa8.01□□□□□ -1.13
SF3B3-210ENST00000567654 ADGRF5Q8IZF2 1346 aa8.01□□□□□ -1.13
SF3B3-210ENST00000567654 NRXN3Q9Y4C0 1643 aa8□□□□□ -1.13
SF3B3-210ENST00000567654 KDM5AP29375 1690 aaKnown RBP8□□□□□ -1.13
SF3B3-210ENST00000567654 ST20-MTHFSA0A0A6YYL1 179 aa8□□□□□ -1.13
SF3B3-210ENST00000567654 RNF223E7ERA6 249 aa8□□□□□ -1.13
SF3B3-210ENST00000567654 DXOO77932 396 aaKnown RBP8□□□□□ -1.13
SF3B3-210ENST00000567654 MLECQ14165 292 aa8□□□□□ -1.13
SF3B3-210ENST00000567654 CCDC24Q8N4L8 307 aa8□□□□□ -1.13
SF3B3-210ENST00000567654 FCF1Q9Y324 198 aaKnown RBP8□□□□□ -1.13
SF3B3-210ENST00000567654 PIK3C2GO75747 1445 aa8□□□□□ -1.13
SF3B3-210ENST00000567654 RIMS1Q86UR5 1692 aaKnown RBP7.99□□□□□ -1.13
SF3B3-210ENST00000567654 USP17L8P0C7I0 530 aa7.99□□□□□ -1.13
SF3B3-210ENST00000567654 MMP16P51512 607 aa7.99□□□□□ -1.13
SF3B3-210ENST00000567654 PLA2G2CQ5R387 149 aa7.99□□□□□ -1.13
SF3B3-210ENST00000567654 HELBQ8NG08 1087 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-210ENST00000567654 HMX1Q9NP08 348 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-210ENST00000567654 SNRKQ9NRH2 765 aa7.99□□□□□ -1.13
SF3B3-210ENST00000567654 DISP3Q9P2K9 1392 aa7.98□□□□□ -1.13
SF3B3-210ENST00000567654 IDI1Q13907 227 aa7.98□□□□□ -1.13
SF3B3-210ENST00000567654 YTHDC1Q96MU7 727 aaKnown RBP7.98□□□□□ -1.13
SF3B3-210ENST00000567654 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.98□□□□□ -1.13
SF3B3-210ENST00000567654 MAP10Q9P2G4 905 aa7.98□□□□□ -1.13
SF3B3-210ENST00000567654 SCAF11Q99590 1463 aaKnown RBP7.98□□□□□ -1.13
SF3B3-210ENST00000567654 LYPD8Q6UX82 237 aa7.97□□□□□ -1.13
SF3B3-210ENST00000567654 EPS8L1Q8TE68 723 aa7.97□□□□□ -1.13
SF3B3-210ENST00000567654 TESK2Q96S53 571 aa7.97□□□□□ -1.13
SF3B3-210ENST00000567654 NUDT12Q9BQG2 462 aa7.97□□□□□ -1.13
SF3B3-210ENST00000567654 GTF3C3Q9Y5Q9 886 aa7.97□□□□□ -1.13
SF3B3-210ENST00000567654 A2ML1A8K2U0 1454 aa7.96□□□□□ -1.13
SF3B3-210ENST00000567654 A0A0G2JS52 829 aa7.96□□□□□ -1.14
SF3B3-210ENST00000567654 CFAP70Q5T0N1 1121 aa7.96□□□□□ -1.14
SF3B3-210ENST00000567654 IFFO2Q5TF58 517 aa7.96□□□□□ -1.14
SF3B3-210ENST00000567654 PTCRAQ6ISU1 281 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-210ENST00000567654 CTHP32929 405 aa7.95□□□□□ -1.14
SF3B3-210ENST00000567654 TMEM259Q4ZIN3 620 aa7.95□□□□□ -1.14
SF3B3-210ENST00000567654 DESI1Q6ICB0 168 aa7.95□□□□□ -1.14
SF3B3-210ENST00000567654 POLR3GLQ9BT43 218 aa7.95□□□□□ -1.14
SF3B3-210ENST00000567654 ALKQ9UM73 1620 aa7.95□□□□□ -1.14
SF3B3-210ENST00000567654 ADAMTSL3P82987 1691 aa7.95□□□□□ -1.14
SF3B3-210ENST00000567654 KNDC1Q76NI1 1749 aa7.95□□□□□ -1.14
SF3B3-210ENST00000567654 PTPRMP28827 1452 aa7.94□□□□□ -1.14
SF3B3-210ENST00000567654 CCNYL3P0C7X3 344 aa7.94□□□□□ -1.14
SF3B3-210ENST00000567654 GGCXP38435 758 aa7.94□□□□□ -1.14
SF3B3-210ENST00000567654 NR6A1Q15406 480 aa7.94□□□□□ -1.14
SF3B3-210ENST00000567654 PTPRNQ16849 979 aa7.94□□□□□ -1.14
SF3B3-210ENST00000567654 MTMR14Q8NCE2 650 aa7.94□□□□□ -1.14
SF3B3-210ENST00000567654 EMID1Q96A84 441 aaPredicted RBP7.94□□□□□ -1.14
SF3B3-210ENST00000567654 ZMYM3Q14202 1370 aa7.94□□□□□ -1.14
SF3B3-210ENST00000567654 RPGRIP1LQ68CZ1 1315 aa7.93□□□□□ -1.14
SF3B3-210ENST00000567654 ZFYVE9O95405 1425 aa7.93□□□□□ -1.14
SF3B3-210ENST00000567654 ANP32CO43423 234 aa7.92□□□□□ -1.14
SF3B3-210ENST00000567654 F12P00748 615 aaPredicted RBP7.92□□□□□ -1.14
SF3B3-210ENST00000567654 MCM6Q14566 821 aa7.92□□□□□ -1.14
SF3B3-210ENST00000567654 CCDC184Q52MB2 194 aa7.92□□□□□ -1.14
SF3B3-210ENST00000567654 ANKLE1Q8NAG6 615 aa7.92□□□□□ -1.14
SF3B3-210ENST00000567654 SLC52A1Q9NWF4 448 aa7.92□□□□□ -1.14
SF3B3-210ENST00000567654 ARID4BQ4LE39 1312 aaPredicted RBP7.92□□□□□ -1.14
SF3B3-210ENST00000567654 TULP4Q9NRJ4 1543 aa7.92□□□□□ -1.14
SF3B3-210ENST00000567654 KCNH2Q12809 1159 aa7.91□□□□□ -1.14
SF3B3-210ENST00000567654 TMEM132EQ6IEE7 984 aa7.91□□□□□ -1.14
SF3B3-210ENST00000567654 LIAT1Q6ZQX7 453 aa7.91□□□□□ -1.14
SF3B3-210ENST00000567654 GJD4Q96KN9 370 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-210ENST00000567654 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
SF3B3-210ENST00000567654 C14orf93Q9H972 538 aaKnown RBP7.91□□□□□ -1.14
SF3B3-210ENST00000567654 EVA1BQ9NVM1 165 aa7.91□□□□□ -1.14
SF3B3-210ENST00000567654 TNRQ92752 1358 aa7.91□□□□□ -1.14
SF3B3-210ENST00000567654 ZNF142P52746 1687 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-210ENST00000567654 RIMS2Q9UQ26 1411 aa7.9□□□□□ -1.14
SF3B3-210ENST00000567654 CCER2I3L3R5 266 aa7.9□□□□□ -1.14
SF3B3-210ENST00000567654 CEBPAP49715 358 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-210ENST00000567654 LINC01559Q495D7 138 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms