RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 NRKQ7Z2Y5 1582 aa19.05■□□□□ 0.64
COMMD4-215ENST00000566843 RNF214Q8ND24 703 aa19.05■□□□□ 0.64
COMMD4-215ENST00000566843 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.05■□□□□ 0.64
COMMD4-215ENST00000566843 ESYT1Q9BSJ8 1104 aa19.05■□□□□ 0.64
COMMD4-215ENST00000566843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.05■□□□□ 0.64
COMMD4-215ENST00000566843 LTKP29376 864 aa19.05■□□□□ 0.64
COMMD4-215ENST00000566843 FOXD4L5Q5VV16 416 aaPredicted RBP19.04■□□□□ 0.64
COMMD4-215ENST00000566843 NME9Q86XW9 330 aa19.04■□□□□ 0.64
COMMD4-215ENST00000566843 FOXD4L4Q8WXT5 416 aaPredicted RBP19.04■□□□□ 0.64
COMMD4-215ENST00000566843 APBB1O00213 710 aa19.04■□□□□ 0.64
COMMD4-215ENST00000566843 PHF14O94880 888 aa19.04■□□□□ 0.64
COMMD4-215ENST00000566843 KRT24Q2M2I5 525 aa19.04■□□□□ 0.64
COMMD4-215ENST00000566843 MYRIPQ8NFW9 859 aa19.04■□□□□ 0.64
COMMD4-215ENST00000566843 SSH2Q76I76 1423 aa19.03■□□□□ 0.64
COMMD4-215ENST00000566843 HDGFP51858 240 aaKnown RBP19.03■□□□□ 0.64
COMMD4-215ENST00000566843 FAM184AQ8NB25 1140 aa19.03■□□□□ 0.64
COMMD4-215ENST00000566843 MCCP23508 829 aa19.03■□□□□ 0.64
COMMD4-215ENST00000566843 TXNDC2Q86VQ3 553 aa19.03■□□□□ 0.64
COMMD4-215ENST00000566843 PTMAP06454 111 aaKnown RBP19.02■□□□□ 0.64
COMMD4-215ENST00000566843 MON2Q7Z3U7 1717 aa19.02■□□□□ 0.63
COMMD4-215ENST00000566843 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.63
COMMD4-215ENST00000566843 THEMISQ8N1K5 641 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-215ENST00000566843 TMEM87AQ8NBN3 555 aa19.01■□□□□ 0.63
COMMD4-215ENST00000566843 PRIMPOLQ96LW4 560 aa19.01■□□□□ 0.63
COMMD4-215ENST00000566843 PALD1Q9ULE6 856 aa19.01■□□□□ 0.63
COMMD4-215ENST00000566843 SETD1AO15047 1707 aaKnown RBP19.01■□□□□ 0.63
COMMD4-215ENST00000566843 PIBF1Q8WXW3 757 aa19■□□□□ 0.63
COMMD4-215ENST00000566843 CPS1P31327 1500 aa19■□□□□ 0.63
COMMD4-215ENST00000566843 COG3Q96JB2 828 aa19■□□□□ 0.63
COMMD4-215ENST00000566843 EPB41L2O43491 1005 aaKnown RBP18.99■□□□□ 0.63
COMMD4-215ENST00000566843 GTF2F1P35269 517 aaKnown RBP eCLIP18.99■□□□□ 0.634e-9■■■■■ 28.7
COMMD4-215ENST00000566843 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
COMMD4-215ENST00000566843 CCDC94Q9BW85 323 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-215ENST00000566843 WDR33Q9C0J8 1336 aaKnown RBP18.99■□□□□ 0.63
COMMD4-215ENST00000566843 GADD45BO75293 160 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-215ENST00000566843 CHMLP26374 656 aa18.99■□□□□ 0.63
COMMD4-215ENST00000566843 EID1Q9Y6B2 187 aa18.99■□□□□ 0.63
COMMD4-215ENST00000566843 CEP170BQ9Y4F5 1589 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-215ENST00000566843 CCT4P50991 539 aaKnown RBP18.98■□□□□ 0.63
COMMD4-215ENST00000566843 USP48Q86UV5 1035 aa18.98■□□□□ 0.63
COMMD4-215ENST00000566843 KLHL34Q8N239 644 aa18.98■□□□□ 0.63
COMMD4-215ENST00000566843 HMGN5P82970 282 aaKnown RBP18.98■□□□□ 0.63
COMMD4-215ENST00000566843 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
COMMD4-215ENST00000566843 CRB1P82279 1406 aa18.97■□□□□ 0.63
COMMD4-215ENST00000566843 STAP2Q9UGK3 403 aa18.97■□□□□ 0.63
COMMD4-215ENST00000566843 NRXN3Q9Y4C0 1643 aa18.97■□□□□ 0.63
COMMD4-215ENST00000566843 WASLO00401 505 aaPredicted RBP18.97■□□□□ 0.63
COMMD4-215ENST00000566843 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
COMMD4-215ENST00000566843 AKAP12Q02952 1782 aa18.97■□□□□ 0.63
COMMD4-215ENST00000566843 METP08581 1390 aa18.96■□□□□ 0.63
COMMD4-215ENST00000566843 RPAP1Q9BWH6 1393 aaPredicted RBP18.96■□□□□ 0.63
COMMD4-215ENST00000566843 CCDC183Q5T5S1 534 aa18.96■□□□□ 0.63
COMMD4-215ENST00000566843 SPTLC3Q9NUV7 552 aa18.96■□□□□ 0.63
COMMD4-215ENST00000566843 LETM1O95202 739 aaPredicted RBP18.95■□□□□ 0.62
COMMD4-215ENST00000566843 NOLC1Q14978 699 aaKnown RBP eCLIP18.95■□□□□ 0.62
COMMD4-215ENST00000566843 SLC26A8Q96RN1 970 aa18.95■□□□□ 0.62
COMMD4-215ENST00000566843 SLIT1O75093 1534 aa18.95■□□□□ 0.62
COMMD4-215ENST00000566843 ARHGAP23Q9P227 1491 aa18.95■□□□□ 0.62
COMMD4-215ENST00000566843 GNAI2P04899 355 aa18.95■□□□□ 0.62
COMMD4-215ENST00000566843 MX1P20591 662 aa18.95■□□□□ 0.62
COMMD4-215ENST00000566843 AEBP1Q8IUX7 1158 aa18.95■□□□□ 0.62
COMMD4-215ENST00000566843 LRRCC1Q9C099 1032 aa18.95■□□□□ 0.62
COMMD4-215ENST00000566843 EIF4A2Q14240 407 aaKnown RBP18.94■□□□□ 0.62
COMMD4-215ENST00000566843 MCM10Q7L590 875 aa18.94■□□□□ 0.62
COMMD4-215ENST00000566843 ANO2Q9NQ90 1003 aa18.94■□□□□ 0.62
COMMD4-215ENST00000566843 ARHGEF10O15013 1369 aa18.94■□□□□ 0.62
COMMD4-215ENST00000566843 PLEKHG1Q9ULL1 1385 aa18.94■□□□□ 0.62
COMMD4-215ENST00000566843 AOX1Q06278 1338 aa18.93■□□□□ 0.62
COMMD4-215ENST00000566843 SULT6B1Q6IMI4 303 aa18.93■□□□□ 0.62
COMMD4-215ENST00000566843 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
COMMD4-215ENST00000566843 RGPD1P0DJD0 1748 aa18.93■□□□□ 0.62
COMMD4-215ENST00000566843 UTP14CQ5TAP6 766 aaKnown RBP18.93■□□□□ 0.62
COMMD4-215ENST00000566843 G2E3Q7L622 706 aa18.93■□□□□ 0.62
COMMD4-215ENST00000566843 ZNF710Q8N1W2 664 aa18.93■□□□□ 0.62
COMMD4-215ENST00000566843 GDPD2Q9HCC8 539 aa18.93■□□□□ 0.62
COMMD4-215ENST00000566843 USP25Q9UHP3 1055 aa18.93■□□□□ 0.62
COMMD4-215ENST00000566843 EXOC6BQ9Y2D4 811 aa18.93■□□□□ 0.62
COMMD4-215ENST00000566843 ADAMTS13Q76LX8 1427 aa18.92■□□□□ 0.62
COMMD4-215ENST00000566843 TCHHQ07283 1943 aa18.92■□□□□ 0.62
COMMD4-215ENST00000566843 KDM4FA0A1W2PPD8 638 aa18.92■□□□□ 0.62
COMMD4-215ENST00000566843 ADCY5O95622 1261 aa18.92■□□□□ 0.62
COMMD4-215ENST00000566843 TSHZ3Q63HK5 1081 aa18.92■□□□□ 0.62
COMMD4-215ENST00000566843 HSPA4P34932 840 aa18.91■□□□□ 0.62
COMMD4-215ENST00000566843 ATP8B2P98198 1209 aa18.91■□□□□ 0.62
COMMD4-215ENST00000566843 FKBP5Q13451 457 aaPredicted RBP18.91■□□□□ 0.62
COMMD4-215ENST00000566843 DNTTIP2Q5QJE6 756 aaKnown RBP18.91■□□□□ 0.62
COMMD4-215ENST00000566843 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
COMMD4-215ENST00000566843 NOL8Q76FK4 1167 aaKnown RBP18.91■□□□□ 0.62
COMMD4-215ENST00000566843 NUDT16Q96DE0 195 aaKnown RBP18.91■□□□□ 0.62
COMMD4-215ENST00000566843 SETD1BQ9UPS6 1966 aaKnown RBP18.9■□□□□ 0.62
COMMD4-215ENST00000566843 F6X3S4 739 aa18.9■□□□□ 0.62
COMMD4-215ENST00000566843 ZNF830Q96NB3 372 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-215ENST00000566843 UPF3BQ9BZI7 483 aaKnown RBP18.9■□□□□ 0.62
COMMD4-215ENST00000566843 KDM4AO75164 1064 aa18.89■□□□□ 0.61
COMMD4-215ENST00000566843 UBE2HP62256 183 aa18.89■□□□□ 0.61
COMMD4-215ENST00000566843 SLC4A10Q6U841 1118 aa18.89■□□□□ 0.61
COMMD4-215ENST00000566843 RILPL2Q969X0 211 aa18.89■□□□□ 0.61
COMMD4-215ENST00000566843 GNAI3P08754 354 aa18.89■□□□□ 0.61
COMMD4-215ENST00000566843 DMTNQ08495 405 aa18.89■□□□□ 0.61
COMMD4-215ENST00000566843 FUCA2Q9BTY2 467 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms