RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-209	ENST00000566749	LRP5	O75197	1615 aa		32.83	■■■□□ 2.85
PPP4C-209	ENST00000566749	MAP3K5	Q99683	1374 aa		32.82	■■■□□ 2.84
PPP4C-209	ENST00000566749	TFCP2L1	Q9NZI6	479 aa		32.82	■■■□□ 2.84
PPP4C-209	ENST00000566749	CASZ1	Q86V15	1759 aa		32.82	■■■□□ 2.84
PPP4C-209	ENST00000566749	GNAT3	A8MTJ3	354 aa		32.81	■■■□□ 2.84
PPP4C-209	ENST00000566749	SLC52A2	Q9HAB3	445 aa		32.81	■■■□□ 2.84
PPP4C-209	ENST00000566749	TAF1L	Q8IZX4	1826 aa		32.81	■■■□□ 2.84
PPP4C-209	ENST00000566749	ATP6V1A	P38606	617 aa		32.79	■■■□□ 2.84
PPP4C-209	ENST00000566749	RBM42	Q9BTD8	480 aa	Known RBP	32.79	■■■□□ 2.84
PPP4C-209	ENST00000566749	ADAMTS7	Q9UKP4	1686 aa		32.78	■■■□□ 2.84
PPP4C-209	ENST00000566749	NEFM	P07197	916 aa		32.78	■■■□□ 2.84
PPP4C-209	ENST00000566749	SPON1	Q9HCB6	807 aa		32.77	■■■□□ 2.84
PPP4C-209	ENST00000566749	MRC1	P22897	1456 aa		32.76	■■■□□ 2.84
PPP4C-209	ENST00000566749	ZBTB7A	O95365	584 aa		32.76	■■■□□ 2.84
PPP4C-209	ENST00000566749	QSER1	Q2KHR3	1735 aa		32.76	■■■□□ 2.83
PPP4C-209	ENST00000566749	TUBGCP6	Q96RT7	1819 aa		32.75	■■■□□ 2.83
PPP4C-209	ENST00000566749	PNPLA7	Q6ZV29	1317 aa		32.74	■■■□□ 2.83
PPP4C-209	ENST00000566749	C4B	P0C0L5	1744 aa		32.74	■■■□□ 2.83
PPP4C-209	ENST00000566749	ITPK1	Q13572	414 aa		32.74	■■■□□ 2.83
PPP4C-209	ENST00000566749	IL17RE	Q8NFR9	667 aa		32.74	■■■□□ 2.83
PPP4C-209	ENST00000566749	PNN	Q9H307	717 aa	Known RBP	32.74	■■■□□ 2.83
PPP4C-209	ENST00000566749	PTCD1	O75127	700 aa	Known RBP	32.73	■■■□□ 2.83
PPP4C-209	ENST00000566749	TEF	Q10587	303 aa		32.72	■■■□□ 2.83
PPP4C-209	ENST00000566749	LINC00116	Q8NCU8	138 aa		32.72	■■■□□ 2.83
PPP4C-209	ENST00000566749	AK7	Q96M32	723 aa		32.72	■■■□□ 2.83
PPP4C-209	ENST00000566749	SLC4A9	Q96Q91	983 aa		32.7	■■■□□ 2.83
PPP4C-209	ENST00000566749	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.7	■■■□□ 2.83
PPP4C-209	ENST00000566749	RTF1	Q92541	710 aa	Known RBP	32.69	■■■□□ 2.82
PPP4C-209	ENST00000566749	PLEKHF1	Q96S99	279 aa		32.69	■■■□□ 2.82
PPP4C-209	ENST00000566749	MTFR1L	Q9H019	292 aa		32.69	■■■□□ 2.82
PPP4C-209	ENST00000566749	ZNF831	Q5JPB2	1677 aa		32.69	■■■□□ 2.82
PPP4C-209	ENST00000566749	SLC39A6	Q13433	755 aa		32.68	■■■□□ 2.82
PPP4C-209	ENST00000566749	MAPK8IP3	Q9UPT6	1336 aa		32.68	■■■□□ 2.82
PPP4C-209	ENST00000566749	MSH5	O43196	834 aa		32.67	■■■□□ 2.82
PPP4C-209	ENST00000566749	WDR43	Q15061	677 aa	Known RBP eCLIP	32.66	■■■□□ 2.82	1e-7	■■□□□ 13.3
PPP4C-209	ENST00000566749	SLC16A10	Q8TF71	515 aa		32.66	■■■□□ 2.82
PPP4C-209	ENST00000566749	CEMIP	Q8WUJ3	1361 aa		32.65	■■■□□ 2.82
PPP4C-209	ENST00000566749	COL23A1	Q86Y22	540 aa	Predicted RBP	32.65	■■■□□ 2.82
PPP4C-209	ENST00000566749	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.65	■■■□□ 2.82
PPP4C-209	ENST00000566749	MCM10	Q7L590	875 aa		32.64	■■■□□ 2.82
PPP4C-209	ENST00000566749	FLAD1	Q8NFF5	587 aa		32.64	■■■□□ 2.82
PPP4C-209	ENST00000566749	HTATSF1	O43719	755 aa	Known RBP	32.63	■■■□□ 2.81
PPP4C-209	ENST00000566749	TTC5	Q8N0Z6	440 aa		32.62	■■■□□ 2.81
PPP4C-209	ENST00000566749	UBR3	Q6ZT12	1888 aa		32.62	■■■□□ 2.81
PPP4C-209	ENST00000566749	SIPA1L3	O60292	1781 aa	Predicted RBP	32.62	■■■□□ 2.81
PPP4C-209	ENST00000566749	GNPAT	O15228	680 aa		32.61	■■■□□ 2.81
PPP4C-209	ENST00000566749	PHF14	O94880	888 aa		32.61	■■■□□ 2.81
PPP4C-209	ENST00000566749	COL5A3	P25940	1745 aa	Predicted RBP	32.61	■■■□□ 2.81
PPP4C-209	ENST00000566749	DLG5	Q8TDM6	1919 aa		32.61	■■■□□ 2.81
PPP4C-209	ENST00000566749	DCTN1	Q14203	1278 aa		32.61	■■■□□ 2.81
PPP4C-209	ENST00000566749	NFE2L2	Q16236	605 aa		32.61	■■■□□ 2.81
PPP4C-209	ENST00000566749	ANP32C	O43423	234 aa		32.6	■■■□□ 2.81
PPP4C-209	ENST00000566749	PTGER2	P43116	358 aa		32.6	■■■□□ 2.81
PPP4C-209	ENST00000566749	AMIGO3	Q86WK7	504 aa		32.59	■■■□□ 2.81
PPP4C-209	ENST00000566749	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.58	■■■□□ 2.81
PPP4C-209	ENST00000566749	SSFA2	P28290	1259 aa		32.58	■■■□□ 2.81
PPP4C-209	ENST00000566749	SMIM5	Q71RC9	77 aa		32.58	■■■□□ 2.81
PPP4C-209	ENST00000566749	KCP	Q6ZWJ8	1503 aa		32.58	■■■□□ 2.81
PPP4C-209	ENST00000566749	TJP1	Q07157	1748 aa		32.58	■■■□□ 2.81
PPP4C-209	ENST00000566749	CNTNAP4	Q9C0A0	1308 aa		32.57	■■■□□ 2.8
PPP4C-209	ENST00000566749	RC3H1	Q5TC82	1133 aa	Known RBP	32.57	■■■□□ 2.8
PPP4C-209	ENST00000566749	ZNF790	Q6PG37	636 aa		32.57	■■■□□ 2.8
PPP4C-209	ENST00000566749	BTBD11	A6QL63	1104 aa		32.56	■■■□□ 2.8
PPP4C-209	ENST00000566749	ADAMTS8	Q9UP79	889 aa		32.56	■■■□□ 2.8
PPP4C-209	ENST00000566749	CIC	Q96RK0	1608 aa	Predicted RBP	32.55	■■■□□ 2.8
PPP4C-209	ENST00000566749	UBR2	Q8IWV8	1755 aa		32.55	■■■□□ 2.8
PPP4C-209	ENST00000566749	DNAJC10	Q8IXB1	793 aa		32.55	■■■□□ 2.8
PPP4C-209	ENST00000566749	CCDC146	Q8IYE0	955 aa		32.55	■■■□□ 2.8
PPP4C-209	ENST00000566749	RTCB	Q9Y3I0	505 aa	Known RBP	32.55	■■■□□ 2.8
PPP4C-209	ENST00000566749	SGIP1	Q9BQI5	828 aa		32.54	■■■□□ 2.8
PPP4C-209	ENST00000566749	MYH14	Q7Z406	1995 aa	Known RBP	32.53	■■■□□ 2.8
PPP4C-209	ENST00000566749	CRKL	P46109	303 aa	Known RBP	32.53	■■■□□ 2.8
PPP4C-209	ENST00000566749	VSIG10	Q8N0Z9	540 aa		32.53	■■■□□ 2.8
PPP4C-209	ENST00000566749	POLD1	P28340	1107 aa		32.52	■■■□□ 2.8
PPP4C-209	ENST00000566749	ZNF496	Q96IT1	587 aa	Predicted RBP	32.52	■■■□□ 2.8
PPP4C-209	ENST00000566749	RUNDC1	Q96C34	613 aa		32.51	■■■□□ 2.79
PPP4C-209	ENST00000566749	RPS6KA4	O75676	772 aa		32.5	■■■□□ 2.79
PPP4C-209	ENST00000566749	RIPK4	P57078	832 aa		32.5	■■■□□ 2.79
PPP4C-209	ENST00000566749	TRAPPC3L	Q5T215	181 aa		32.5	■■■□□ 2.79
PPP4C-209	ENST00000566749	MSL1	Q68DK7	614 aa		32.5	■■■□□ 2.79
PPP4C-209	ENST00000566749	FMNL2	Q96PY5	1086 aa		32.49	■■■□□ 2.79
PPP4C-209	ENST00000566749	TMPO	P42166	694 aa	Known RBP	32.48	■■■□□ 2.79
PPP4C-209	ENST00000566749	TAF7	Q15545	349 aa	Predicted RBP	32.48	■■■□□ 2.79
PPP4C-209	ENST00000566749	ARX	Q96QS3	562 aa		32.48	■■■□□ 2.79
PPP4C-209	ENST00000566749	COL24A1	Q17RW2	1714 aa		32.48	■■■□□ 2.79
PPP4C-209	ENST00000566749	KCNQ3	O43525	872 aa		32.48	■■■□□ 2.79
PPP4C-209	ENST00000566749	CCDC184	Q52MB2	194 aa		32.48	■■■□□ 2.79
PPP4C-209	ENST00000566749	HEG1	Q9ULI3	1381 aa		32.47	■■■□□ 2.79
PPP4C-209	ENST00000566749	CYP19A1	P11511	503 aa	Predicted RBP	32.47	■■■□□ 2.79
PPP4C-209	ENST00000566749	ADRA2B	P18089	450 aa		32.47	■■■□□ 2.79
PPP4C-209	ENST00000566749	THUMPD2	Q9BTF0	503 aa	Known RBP	32.47	■■■□□ 2.79
PPP4C-209	ENST00000566749	CCDC87	Q9NVE4	849 aa		32.47	■■■□□ 2.79
PPP4C-209	ENST00000566749	INTS5	Q6P9B9	1019 aa	Known RBP	32.46	■■■□□ 2.79
PPP4C-209	ENST00000566749	RRP7A	Q9Y3A4	280 aa	Known RBP	32.46	■■■□□ 2.79
PPP4C-209	ENST00000566749	NEUROD2	Q15784	382 aa		32.45	■■■□□ 2.79
PPP4C-209	ENST00000566749	LMOD3	Q0VAK6	560 aa		32.44	■■■□□ 2.78
PPP4C-209	ENST00000566749	ARHGEF1	Q92888	912 aa	Known RBP	32.44	■■■□□ 2.78
PPP4C-209	ENST00000566749	STARD3NL	O95772	234 aa		32.43	■■■□□ 2.78
PPP4C-209	ENST00000566749	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.43	■■■□□ 2.78
PPP4C-209	ENST00000566749	RFC4	P35249	363 aa		32.42	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms