RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 CABP4P57796 275 aa18.21■□□□□ 0.51
SPG7-215ENST00000566682 POTEHQ6S545 545 aa18.21■□□□□ 0.51
SPG7-215ENST00000566682 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
SPG7-215ENST00000566682 RNMTO43148 476 aaKnown RBP18.2■□□□□ 0.5
SPG7-215ENST00000566682 NBPF14Q5TI25 921 aa18.2■□□□□ 0.5
SPG7-215ENST00000566682 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
SPG7-215ENST00000566682 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
SPG7-215ENST00000566682 LRRC4BQ9NT99 713 aa18.2■□□□□ 0.5
SPG7-215ENST00000566682 SLC27A3Q5K4L6 730 aa18.19■□□□□ 0.5
SPG7-215ENST00000566682 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
SPG7-215ENST00000566682 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
SPG7-215ENST00000566682 ADAMTS7Q9UKP4 1686 aa18.18■□□□□ 0.5
SPG7-215ENST00000566682 PALLDQ8WX93 1383 aa18.18■□□□□ 0.5
SPG7-215ENST00000566682 MAP3K5Q99683 1374 aa18.18■□□□□ 0.5
SPG7-215ENST00000566682 NEFMP07197 916 aa18.18■□□□□ 0.5
SPG7-215ENST00000566682 KCNQ4P56696 695 aa18.18■□□□□ 0.5
SPG7-215ENST00000566682 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
SPG7-215ENST00000566682 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
SPG7-215ENST00000566682 R3HDM1Q15032 1099 aaKnown RBP18.17■□□□□ 0.5
SPG7-215ENST00000566682 WDR43Q15061 677 aaKnown RBP eCLIP18.17■□□□□ 0.5
SPG7-215ENST00000566682 CCDC184Q52MB2 194 aa18.17■□□□□ 0.5
SPG7-215ENST00000566682 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
SPG7-215ENST00000566682 CCNL1Q9UK58 526 aaPredicted RBP18.17■□□□□ 0.5
SPG7-215ENST00000566682 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
SPG7-215ENST00000566682 IL17REQ8NFR9 667 aa18.16■□□□□ 0.5
SPG7-215ENST00000566682 SLC52A2Q9HAB3 445 aa18.16■□□□□ 0.5
SPG7-215ENST00000566682 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
SPG7-215ENST00000566682 ADAMTS8Q9UP79 889 aa18.15■□□□□ 0.5
SPG7-215ENST00000566682 PAPPAQ13219 1627 aa18.14■□□□□ 0.49
SPG7-215ENST00000566682 MAPK8IP3Q9UPT6 1336 aa18.14■□□□□ 0.49
SPG7-215ENST00000566682 TAF1LQ8IZX4 1826 aa18.14■□□□□ 0.49
SPG7-215ENST00000566682 MRC1P22897 1456 aa18.14■□□□□ 0.49
SPG7-215ENST00000566682 SLC15A2Q16348 729 aa18.13■□□□□ 0.49
SPG7-215ENST00000566682 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
SPG7-215ENST00000566682 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
SPG7-215ENST00000566682 LOC102724428A0A0B4J2F2 783 aa18.12■□□□□ 0.49
SPG7-215ENST00000566682 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
SPG7-215ENST00000566682 SIK1P57059 783 aa18.12■□□□□ 0.49
SPG7-215ENST00000566682 TEFQ10587 303 aa18.12■□□□□ 0.49
SPG7-215ENST00000566682 CCDC146Q8IYE0 955 aa18.12■□□□□ 0.49
SPG7-215ENST00000566682 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
SPG7-215ENST00000566682 C5P01031 1676 aa18.12■□□□□ 0.49
SPG7-215ENST00000566682 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
SPG7-215ENST00000566682 NFE2L2Q16236 605 aa18.11■□□□□ 0.49
SPG7-215ENST00000566682 MCM10Q7L590 875 aa18.11■□□□□ 0.49
SPG7-215ENST00000566682 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
SPG7-215ENST00000566682 CEMIPQ8WUJ3 1361 aa18.11■□□□□ 0.49
SPG7-215ENST00000566682 ATP6V1AP38606 617 aa18.1■□□□□ 0.49
SPG7-215ENST00000566682 SLC39A6Q13433 755 aa18.1■□□□□ 0.49
SPG7-215ENST00000566682 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
SPG7-215ENST00000566682 ZNF827Q17R98 1081 aa18.1■□□□□ 0.49
SPG7-215ENST00000566682 AKT1S1Q96B36 256 aa18.1■□□□□ 0.49
SPG7-215ENST00000566682 RUNDC1Q96C34 613 aa18.1■□□□□ 0.49
SPG7-215ENST00000566682 MRS2Q9HD23 443 aa18.1■□□□□ 0.49
SPG7-215ENST00000566682 PTCD1O75127 700 aaKnown RBP18.09■□□□□ 0.49
SPG7-215ENST00000566682 SLC4A9Q96Q91 983 aa18.09■□□□□ 0.49
SPG7-215ENST00000566682 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
SPG7-215ENST00000566682 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
SPG7-215ENST00000566682 ITPK1Q13572 414 aa18.08■□□□□ 0.48
SPG7-215ENST00000566682 ZNF831Q5JPB2 1677 aa18.08■□□□□ 0.48
SPG7-215ENST00000566682 RIPK4P57078 832 aa18.07■□□□□ 0.48
SPG7-215ENST00000566682 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
SPG7-215ENST00000566682 TUBGCP6Q96RT7 1819 aa18.07■□□□□ 0.48
SPG7-215ENST00000566682 C4BP0C0L5 1744 aa18.06■□□□□ 0.48
SPG7-215ENST00000566682 POLA2Q14181 598 aa18.06■□□□□ 0.48
SPG7-215ENST00000566682 LINC00116Q8NCU8 138 aa18.06■□□□□ 0.48
SPG7-215ENST00000566682 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
SPG7-215ENST00000566682 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
SPG7-215ENST00000566682 BTBD11A6QL63 1104 aa18.05■□□□□ 0.48
SPG7-215ENST00000566682 NEUROD2Q15784 382 aa18.05■□□□□ 0.48
SPG7-215ENST00000566682 TFCP2L1Q9NZI6 479 aa18.05■□□□□ 0.48
SPG7-215ENST00000566682 RRP7AQ9Y3A4 280 aaKnown RBP18.05■□□□□ 0.48
SPG7-215ENST00000566682 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
SPG7-215ENST00000566682 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
SPG7-215ENST00000566682 ZNF790Q6PG37 636 aa18.04■□□□□ 0.48
SPG7-215ENST00000566682 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
SPG7-215ENST00000566682 COL5A3P25940 1745 aaPredicted RBP18.03■□□□□ 0.48
SPG7-215ENST00000566682 KCPQ6ZWJ8 1503 aa18.03■□□□□ 0.48
SPG7-215ENST00000566682 TAF7Q15545 349 aaPredicted RBP18.03■□□□□ 0.48
SPG7-215ENST00000566682 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
SPG7-215ENST00000566682 TJP1Q07157 1748 aa18.03■□□□□ 0.48
SPG7-215ENST00000566682 PNPLA7Q6ZV29 1317 aa18.02■□□□□ 0.48
SPG7-215ENST00000566682 KCNQ3O43525 872 aa18.02■□□□□ 0.48
SPG7-215ENST00000566682 AK7Q96M32 723 aa18.02■□□□□ 0.48
SPG7-215ENST00000566682 CICQ96RK0 1608 aaPredicted RBP18.01■□□□□ 0.47
SPG7-215ENST00000566682 UBR3Q6ZT12 1888 aa18.01■□□□□ 0.47
SPG7-215ENST00000566682 APAF1O14727 1248 aa18.01■□□□□ 0.47
SPG7-215ENST00000566682 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
SPG7-215ENST00000566682 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
SPG7-215ENST00000566682 DNAJC10Q8IXB1 793 aa18■□□□□ 0.47
SPG7-215ENST00000566682 VSIG10Q8N0Z9 540 aa18■□□□□ 0.47
SPG7-215ENST00000566682 ZNF496Q96IT1 587 aaPredicted RBP18■□□□□ 0.47
SPG7-215ENST00000566682 MIS18AQ9NYP9 233 aa18■□□□□ 0.47
SPG7-215ENST00000566682 TRIM35Q9UPQ4 493 aa18■□□□□ 0.47
SPG7-215ENST00000566682 RC3H1Q5TC82 1133 aaKnown RBP17.99■□□□□ 0.47
SPG7-215ENST00000566682 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
SPG7-215ENST00000566682 COL23A1Q86Y22 540 aaPredicted RBP17.99■□□□□ 0.47
SPG7-215ENST00000566682 GNPATO15228 680 aa17.98■□□□□ 0.47
SPG7-215ENST00000566682 ZBTB7AO95365 584 aa17.98■□□□□ 0.47
SPG7-215ENST00000566682 SMIM5Q71RC9 77 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms