RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RUNDC1Q96C34 613 aa15.18■□□□□ 0.02
KARS-207ENST00000566560 MAP3K5Q99683 1374 aa15.18■□□□□ 0.02
KARS-207ENST00000566560 ADAMTS7Q9UKP4 1686 aa15.18■□□□□ 0.02
KARS-207ENST00000566560 KAT6BQ8WYB5 2073 aa15.17■□□□□ 0.02
KARS-207ENST00000566560 PHKG2P15735 406 aa15.17■□□□□ 0.02
KARS-207ENST00000566560 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.027e-7■■■□□ 16.9
KARS-207ENST00000566560 IFNL2Q8IZJ0 200 aa15.17■□□□□ 0.02
KARS-207ENST00000566560 ITGB4P16144 1822 aa15.16■□□□□ 0.02
KARS-207ENST00000566560 FAM182BQ5T319 152 aa15.16■□□□□ 0.02
KARS-207ENST00000566560 BCL9O00512 1426 aa15.16■□□□□ 0.02
KARS-207ENST00000566560 KDM6AO15550 1401 aaPredicted RBP15.16■□□□□ 0.02
KARS-207ENST00000566560 AKAP4Q5JQC9 854 aa15.15■□□□□ 0.02
KARS-207ENST00000566560 TNS1Q9HBL0 1735 aaKnown RBP15.14■□□□□ 0.01
KARS-207ENST00000566560 MRC1P22897 1456 aa15.14■□□□□ 0.01
KARS-207ENST00000566560 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
KARS-207ENST00000566560 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
KARS-207ENST00000566560 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
KARS-207ENST00000566560 FAM196AQ6ZSG2 479 aa15.13■□□□□ 0.01
KARS-207ENST00000566560 BTAF1O14981 1849 aa15.13■□□□□ 0.01
KARS-207ENST00000566560 SIPA1L3O60292 1781 aaPredicted RBP15.12■□□□□ 0.01
KARS-207ENST00000566560 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
KARS-207ENST00000566560 TMPOP42166 694 aaKnown RBP15.12■□□□□ 0.01
KARS-207ENST00000566560 NKX1-1Q15270 411 aaPredicted RBP15.12■□□□□ 0.01
KARS-207ENST00000566560 DCAF5Q96JK2 942 aa15.12■□□□□ 0.01
KARS-207ENST00000566560 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
KARS-207ENST00000566560 APAF1O14727 1248 aa15.11■□□□□ 0.01
KARS-207ENST00000566560 CHADLQ6NUI6 762 aa15.11■□□□□ 0.01
KARS-207ENST00000566560 MPRIPQ6WCQ1 1025 aa15.11■□□□□ 0.01
KARS-207ENST00000566560 ILDR2Q71H61 639 aa15.11■□□□□ 0.01
KARS-207ENST00000566560 LMOD3Q0VAK6 560 aa15.1■□□□□ 0.01
KARS-207ENST00000566560 NEUROD2Q15784 382 aa15.1■□□□□ 0.01
KARS-207ENST00000566560 RTF1Q92541 710 aaKnown RBP15.1■□□□□ 0.01
KARS-207ENST00000566560 ACSBG1Q96GR2 724 aa15.1■□□□□ 0.01
KARS-207ENST00000566560 PAPPAQ13219 1627 aa15.1■□□□□ 0.01
KARS-207ENST00000566560 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
KARS-207ENST00000566560 RIPK4P57078 832 aa15.09■□□□□ 0.01
KARS-207ENST00000566560 SYTL4Q96C24 671 aaPredicted RBP15.09■□□□□ 0.01
KARS-207ENST00000566560 SENP3-EIF4A1A0A087X0R7 540 aa15.08■□□□□ 0
KARS-207ENST00000566560 RNMTO43148 476 aaKnown RBP15.08■□□□□ 0
KARS-207ENST00000566560 MCM10Q7L590 875 aa15.08■□□□□ 0
KARS-207ENST00000566560 PIP4P2Q8N4L2 257 aa15.08■□□□□ 0
KARS-207ENST00000566560 CEMIPQ8WUJ3 1361 aa15.08■□□□□ 0
KARS-207ENST00000566560 EP400Q96L91 3159 aa15.08■□□□□ 0
KARS-207ENST00000566560 RGPD3A6NKT7 1758 aaPredicted RBP15.07■□□□□ 0
KARS-207ENST00000566560 RGPD4Q7Z3J3 1758 aa15.07■□□□□ 0
KARS-207ENST00000566560 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
KARS-207ENST00000566560 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
KARS-207ENST00000566560 TRIM37O94972 964 aa15.06■□□□□ 0
KARS-207ENST00000566560 PRIM1P49642 420 aaKnown RBP15.06■□□□□ 0
KARS-207ENST00000566560 DCTN1Q14203 1278 aa15.06■□□□□ 0
KARS-207ENST00000566560 LGR6Q9HBX8 967 aa15.06■□□□□ 0
KARS-207ENST00000566560 TMOD3Q9NYL9 352 aa15.06■□□□□ 0
KARS-207ENST00000566560 KDM3BQ7LBC6 1761 aa15.06■□□□□ 0
KARS-207ENST00000566560 KCNQ2O43526 872 aa15.05■□□□□ -0
KARS-207ENST00000566560 CABP4P57796 275 aa15.05■□□□□ -0
KARS-207ENST00000566560 TEFQ10587 303 aa15.05■□□□□ -0
KARS-207ENST00000566560 IL17REQ8NFR9 667 aa15.05■□□□□ -0
KARS-207ENST00000566560 THUMPD2Q9BTF0 503 aaKnown RBP15.05■□□□□ -0
KARS-207ENST00000566560 SLC52A2Q9HAB3 445 aa15.05■□□□□ -0
KARS-207ENST00000566560 UBR2Q8IWV8 1755 aa15.04■□□□□ -0
KARS-207ENST00000566560 PTF1AQ7RTS3 328 aa15.04■□□□□ -0
KARS-207ENST00000566560 BCL11BQ9C0K0 894 aaPredicted RBP15.04■□□□□ -0
KARS-207ENST00000566560 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
KARS-207ENST00000566560 LY75O60449 1722 aa15.03■□□□□ -0
KARS-207ENST00000566560 SALL2Q9Y467 1007 aaPredicted RBP15.03■□□□□ -0
KARS-207ENST00000566560 NUBP1P53384 320 aa15.02■□□□□ -0
KARS-207ENST00000566560 CCDC27Q2M243 656 aa15.02■□□□□ -0
KARS-207ENST00000566560 NGEFQ8N5V2 710 aa15.02■□□□□ -0
KARS-207ENST00000566560 PIGBQ92521 554 aa15.02■□□□□ -0
KARS-207ENST00000566560 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
KARS-207ENST00000566560 SF3B2Q13435 895 aaKnown RBP15.01□□□□□ -0.01
KARS-207ENST00000566560 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
KARS-207ENST00000566560 PALLDQ8WX93 1383 aa15□□□□□ -0.01
KARS-207ENST00000566560 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.01
KARS-207ENST00000566560 CALD1Q05682 793 aaKnown RBP15□□□□□ -0.01
KARS-207ENST00000566560 WWC1Q8IX03 1113 aa15□□□□□ -0.01
KARS-207ENST00000566560 KCPQ6ZWJ8 1503 aa15□□□□□ -0.01
KARS-207ENST00000566560 RREB1Q92766 1687 aa15□□□□□ -0.01
KARS-207ENST00000566560 CICQ96RK0 1608 aaPredicted RBP14.99□□□□□ -0.01
KARS-207ENST00000566560 BTBD11A6QL63 1104 aa14.98□□□□□ -0.01
KARS-207ENST00000566560 APBA3O96018 575 aa14.98□□□□□ -0.01
KARS-207ENST00000566560 UPF1Q92900 1129 aaKnown RBP eCLIP14.98□□□□□ -0.01
KARS-207ENST00000566560 TJP1Q07157 1748 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 C5P01031 1676 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 BAG6P46379 1132 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 TAF7Q15545 349 aaPredicted RBP14.97□□□□□ -0.01
KARS-207ENST00000566560 CCDC125Q86Z20 511 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 TTC5Q8N0Z6 440 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 SMARCC1Q92922 1105 aaPredicted RBP14.97□□□□□ -0.01
KARS-207ENST00000566560 ATG3Q9NT62 314 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 ASAP1Q9ULH1 1129 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 LAMB4A4D0S4 1761 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 NUP188Q5SRE5 1749 aa14.97□□□□□ -0.01
KARS-207ENST00000566560 ZNF521Q96K83 1311 aa14.96□□□□□ -0.01
KARS-207ENST00000566560 SLC39A6Q13433 755 aa14.96□□□□□ -0.01
KARS-207ENST00000566560 IFT57Q9NWB7 429 aa14.96□□□□□ -0.01
KARS-207ENST00000566560 TSPYL4Q9UJ04 414 aa14.96□□□□□ -0.01
KARS-207ENST00000566560 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
KARS-207ENST00000566560 TAF1LQ8IZX4 1826 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms