RNA–Protein interactions for RNA: ENST00000566056.1

AC135048.1-201, humanhuman

TSL 2 BASIC

Gene AC135048.1, Length 1,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC135048.1-201ENST00000566056 ZNF827Q17R98 1081 aa28.61■■■□□ 2.17
AC135048.1-201ENST00000566056 MTFR1LQ9H019 292 aa28.61■■■□□ 2.17
AC135048.1-201ENST00000566056 MAP3K5Q99683 1374 aa28.61■■■□□ 2.17
AC135048.1-201ENST00000566056 AK7Q96M32 723 aa28.6■■■□□ 2.17
AC135048.1-201ENST00000566056 PPP1R1BQ9UD71 204 aaPredicted RBP28.6■■■□□ 2.17
AC135048.1-201ENST00000566056 KCNQ4P56696 695 aa28.59■■■□□ 2.17
AC135048.1-201ENST00000566056 RTF1Q92541 710 aaKnown RBP28.59■■■□□ 2.17
AC135048.1-201ENST00000566056 RBM42Q9BTD8 480 aaKnown RBP28.59■■■□□ 2.17
AC135048.1-201ENST00000566056 TEFQ10587 303 aa28.58■■■□□ 2.17
AC135048.1-201ENST00000566056 SCN11AQ9UI33 1791 aa28.57■■■□□ 2.16
AC135048.1-201ENST00000566056 PRKRIP1Q9H875 184 aaPredicted RBP28.56■■■□□ 2.16
AC135048.1-201ENST00000566056 LGR6Q9HBX8 967 aa28.56■■■□□ 2.16
AC135048.1-201ENST00000566056 HTATSF1O43719 755 aaKnown RBP28.55■■■□□ 2.16
AC135048.1-201ENST00000566056 QSER1Q2KHR3 1735 aa28.55■■■□□ 2.16
AC135048.1-201ENST00000566056 CASZ1Q86V15 1759 aa28.54■■■□□ 2.16
AC135048.1-201ENST00000566056 MAPK8IP3Q9UPT6 1336 aa28.54■■■□□ 2.16
AC135048.1-201ENST00000566056 C5P01031 1676 aa28.54■■■□□ 2.16
AC135048.1-201ENST00000566056 ZBTB7AO95365 584 aa28.53■■■□□ 2.16
AC135048.1-201ENST00000566056 PHACTR3Q96KR7 559 aa28.53■■■□□ 2.16
AC135048.1-201ENST00000566056 PNPLA7Q6ZV29 1317 aa28.53■■■□□ 2.16
AC135048.1-201ENST00000566056 MSH5O43196 834 aa28.52■■■□□ 2.16
AC135048.1-201ENST00000566056 TTC5Q8N0Z6 440 aa28.52■■■□□ 2.16
AC135048.1-201ENST00000566056 MRC1P22897 1456 aa28.51■■■□□ 2.16
AC135048.1-201ENST00000566056 ZNF831Q5JPB2 1677 aa28.51■■■□□ 2.15
AC135048.1-201ENST00000566056 SSFA2P28290 1259 aa28.5■■■□□ 2.15
AC135048.1-201ENST00000566056 POLD1P28340 1107 aa28.5■■■□□ 2.15
AC135048.1-201ENST00000566056 WDR43Q15061 677 aaKnown RBP eCLIP28.5■■■□□ 2.15
AC135048.1-201ENST00000566056 RC3H1Q5TC82 1133 aaKnown RBP28.5■■■□□ 2.15
AC135048.1-201ENST00000566056 PTCD1O75127 700 aaKnown RBP28.49■■■□□ 2.15
AC135048.1-201ENST00000566056 ATF5Q9Y2D1 282 aaPredicted RBP28.49■■■□□ 2.15
AC135048.1-201ENST00000566056 TAF1LQ8IZX4 1826 aa28.48■■■□□ 2.15
AC135048.1-201ENST00000566056 ADAMTS7Q9UKP4 1686 aa28.48■■■□□ 2.15
AC135048.1-201ENST00000566056 C4BP0C0L5 1744 aa28.48■■■□□ 2.15
AC135048.1-201ENST00000566056 IL17REQ8NFR9 667 aa28.47■■■□□ 2.15
AC135048.1-201ENST00000566056 PDGFDQ9GZP0 370 aaPredicted RBP28.47■■■□□ 2.15
AC135048.1-201ENST00000566056 ITPK1Q13572 414 aa28.46■■■□□ 2.15
AC135048.1-201ENST00000566056 VSIG10Q8N0Z9 540 aa28.46■■■□□ 2.15
AC135048.1-201ENST00000566056 LINC00116Q8NCU8 138 aa28.46■■■□□ 2.15
AC135048.1-201ENST00000566056 RTCBQ9Y3I0 505 aaKnown RBP28.46■■■□□ 2.15
AC135048.1-201ENST00000566056 CEMIPQ8WUJ3 1361 aa28.45■■■□□ 2.15
AC135048.1-201ENST00000566056 CNTNAP4Q9C0A0 1308 aa28.45■■■□□ 2.15
AC135048.1-201ENST00000566056 GNPATO15228 680 aa28.44■■■□□ 2.14
AC135048.1-201ENST00000566056 ADRA2BP18089 450 aa28.44■■■□□ 2.14
AC135048.1-201ENST00000566056 COL23A1Q86Y22 540 aaPredicted RBP28.44■■■□□ 2.14
AC135048.1-201ENST00000566056 ANP32CO43423 234 aa28.43■■■□□ 2.14
AC135048.1-201ENST00000566056 PLEKHF1Q96S99 279 aa28.43■■■□□ 2.14
AC135048.1-201ENST00000566056 TEX13AQ9BXU3 409 aaPredicted RBP28.43■■■□□ 2.14
AC135048.1-201ENST00000566056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.43■■■□□ 2.14
AC135048.1-201ENST00000566056 DCAF8L1A6NGE4 600 aa28.42■■■□□ 2.14
AC135048.1-201ENST00000566056 NFE2L2Q16236 605 aa28.42■■■□□ 2.14
AC135048.1-201ENST00000566056 TRAPPC3LQ5T215 181 aa28.42■■■□□ 2.14
AC135048.1-201ENST00000566056 BTBD11A6QL63 1104 aa28.41■■■□□ 2.14
AC135048.1-201ENST00000566056 PTGER2P43116 358 aa28.41■■■□□ 2.14
AC135048.1-201ENST00000566056 LMOD3Q0VAK6 560 aa28.41■■■□□ 2.14
AC135048.1-201ENST00000566056 SLC39A6Q13433 755 aa28.41■■■□□ 2.14
AC135048.1-201ENST00000566056 ZNF790Q6PG37 636 aa28.41■■■□□ 2.14
AC135048.1-201ENST00000566056 SLC4A9Q96Q91 983 aa28.41■■■□□ 2.14
AC135048.1-201ENST00000566056 VIRMAQ69YN4 1812 aaKnown RBP28.4■■■□□ 2.14
AC135048.1-201ENST00000566056 RPS6KA4O75676 772 aa28.4■■■□□ 2.14
AC135048.1-201ENST00000566056 PHF14O94880 888 aa28.4■■■□□ 2.14
AC135048.1-201ENST00000566056 PNISRQ8TF01 805 aaKnown RBP28.4■■■□□ 2.14
AC135048.1-201ENST00000566056 ARXQ96QS3 562 aa28.4■■■□□ 2.14
AC135048.1-201ENST00000566056 STARD3NLO95772 234 aa28.38■■■□□ 2.13
AC135048.1-201ENST00000566056 FMNL2Q96PY5 1086 aa28.38■■■□□ 2.13
AC135048.1-201ENST00000566056 SGIP1Q9BQI5 828 aa28.38■■■□□ 2.13
AC135048.1-201ENST00000566056 MCM10Q7L590 875 aa28.37■■■□□ 2.13
AC135048.1-201ENST00000566056 CRKLP46109 303 aaKnown RBP28.36■■■□□ 2.13
AC135048.1-201ENST00000566056 TAF7Q15545 349 aaPredicted RBP28.36■■■□□ 2.13
AC135048.1-201ENST00000566056 TUBGCP6Q96RT7 1819 aa28.36■■■□□ 2.13
AC135048.1-201ENST00000566056 CICQ96RK0 1608 aaPredicted RBP28.35■■■□□ 2.13
AC135048.1-201ENST00000566056 RFC4P35249 363 aa28.35■■■□□ 2.13
AC135048.1-201ENST00000566056 RUNDC1Q96C34 613 aa28.35■■■□□ 2.13
AC135048.1-201ENST00000566056 UBR3Q6ZT12 1888 aa28.33■■■□□ 2.13
AC135048.1-201ENST00000566056 DNAJC10Q8IXB1 793 aa28.33■■■□□ 2.13
AC135048.1-201ENST00000566056 CCDC87Q9NVE4 849 aa28.33■■■□□ 2.13
AC135048.1-201ENST00000566056 HEG1Q9ULI3 1381 aa28.32■■■□□ 2.12
AC135048.1-201ENST00000566056 RIPK4P57078 832 aa28.32■■■□□ 2.12
AC135048.1-201ENST00000566056 NPM2Q86SE8 214 aaKnown RBP28.32■■■□□ 2.12
AC135048.1-201ENST00000566056 COL5A3P25940 1745 aaPredicted RBP28.31■■■□□ 2.12
AC135048.1-201ENST00000566056 NLGN1Q8N2Q7 840 aa28.31■■■□□ 2.12
AC135048.1-201ENST00000566056 KCPQ6ZWJ8 1503 aa28.3■■■□□ 2.12
AC135048.1-201ENST00000566056 CYP19A1P11511 503 aaPredicted RBP28.3■■■□□ 2.12
AC135048.1-201ENST00000566056 ZNF496Q96IT1 587 aaPredicted RBP28.3■■■□□ 2.12
AC135048.1-201ENST00000566056 ADAMTS8Q9UP79 889 aa28.3■■■□□ 2.12
AC135048.1-201ENST00000566056 TMPOP42166 694 aaKnown RBP28.29■■■□□ 2.12
AC135048.1-201ENST00000566056 DCTN1Q14203 1278 aa28.29■■■□□ 2.12
AC135048.1-201ENST00000566056 ARHGEF1Q92888 912 aaKnown RBP28.29■■■□□ 2.12
AC135048.1-201ENST00000566056 SIPA1L3O60292 1781 aaPredicted RBP28.28■■■□□ 2.12
AC135048.1-201ENST00000566056 FHDC1Q9C0D6 1143 aaPredicted RBP28.28■■■□□ 2.12
AC135048.1-201ENST00000566056 COL24A1Q17RW2 1714 aa28.27■■■□□ 2.12
AC135048.1-201ENST00000566056 BABAM1Q9NWV8 329 aa28.27■■■□□ 2.12
AC135048.1-201ENST00000566056 UBR2Q8IWV8 1755 aa28.27■■■□□ 2.12
AC135048.1-201ENST00000566056 A0A087WZG4 1122 aa28.26■■■□□ 2.11
AC135048.1-201ENST00000566056 SNRPA1P09661 255 aaKnown RBP28.26■■■□□ 2.11
AC135048.1-201ENST00000566056 MSL1Q68DK7 614 aa28.26■■■□□ 2.11
AC135048.1-201ENST00000566056 INTS5Q6P9B9 1019 aaKnown RBP28.26■■■□□ 2.11
AC135048.1-201ENST00000566056 SYT17Q9BSW7 474 aa28.26■■■□□ 2.11
AC135048.1-201ENST00000566056 TJP1Q07157 1748 aa28.26■■■□□ 2.11
AC135048.1-201ENST00000566056 ZPR1O75312 459 aa28.25■■■□□ 2.11
AC135048.1-201ENST00000566056 AMIGO3Q86WK7 504 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms