RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 C20orf194Q5TEA3 1177 aa23.83■■□□□ 1.4
EDC3-208ENST00000565602 RNMTO43148 476 aaKnown RBP23.82■■□□□ 1.4
EDC3-208ENST00000565602 BCAR3O75815 825 aa23.82■■□□□ 1.4
EDC3-208ENST00000565602 ITGB4P16144 1822 aa23.82■■□□□ 1.4
EDC3-208ENST00000565602 DOT1LQ8TEK3 1739 aa23.82■■□□□ 1.4
EDC3-208ENST00000565602 RBM6P78332 1123 aaKnown RBP23.81■■□□□ 1.4
EDC3-208ENST00000565602 POTEAQ6S8J7 498 aa23.81■■□□□ 1.4
EDC3-208ENST00000565602 MARCH10Q8NA82 808 aaPredicted RBP23.8■■□□□ 1.4
EDC3-208ENST00000565602 KDM3BQ7LBC6 1761 aa23.8■■□□□ 1.4
EDC3-208ENST00000565602 DCAF5Q96JK2 942 aa23.79■■□□□ 1.4
EDC3-208ENST00000565602 HSP90AB1P08238 724 aaKnown RBP23.79■■□□□ 1.4
EDC3-208ENST00000565602 CT47B1P0C2W7 299 aaPredicted RBP23.79■■□□□ 1.4
EDC3-208ENST00000565602 SEPT12Q8IYM1 358 aa23.79■■□□□ 1.4
EDC3-208ENST00000565602 ZNF853P0CG23 659 aa23.78■■□□□ 1.4
EDC3-208ENST00000565602 RARSP54136 660 aaKnown RBP23.78■■□□□ 1.4
EDC3-208ENST00000565602 TSR2Q969E8 191 aaKnown RBP23.78■■□□□ 1.4
EDC3-208ENST00000565602 A0A0G2JS52 829 aa23.77■■□□□ 1.4
EDC3-208ENST00000565602 MYT1Q01538 1121 aa23.77■■□□□ 1.4
EDC3-208ENST00000565602 CALD1Q05682 793 aaKnown RBP23.76■■□□□ 1.39
EDC3-208ENST00000565602 IFT57Q9NWB7 429 aa23.75■■□□□ 1.39
EDC3-208ENST00000565602 SBF2Q86WG5 1849 aa23.75■■□□□ 1.39
EDC3-208ENST00000565602 CFAP44Q96MT7 982 aa23.75■■□□□ 1.39
EDC3-208ENST00000565602 RGS12O14924 1447 aa23.74■■□□□ 1.39
EDC3-208ENST00000565602 RXRBP28702 533 aa23.74■■□□□ 1.39
EDC3-208ENST00000565602 PAPPAQ13219 1627 aa23.74■■□□□ 1.39
EDC3-208ENST00000565602 KAT6BQ8WYB5 2073 aa23.73■■□□□ 1.39
EDC3-208ENST00000565602 CHL1O00533 1208 aa23.73■■□□□ 1.39
EDC3-208ENST00000565602 CANXP27824 592 aaKnown RBP23.73■■□□□ 1.39
EDC3-208ENST00000565602 EXOSC9Q06265 439 aaKnown RBP23.73■■□□□ 1.39
EDC3-208ENST00000565602 SLC52A2Q9HAB3 445 aa23.73■■□□□ 1.39
EDC3-208ENST00000565602 GNAI1P63096 354 aa23.72■■□□□ 1.39
EDC3-208ENST00000565602 PDE3AQ14432 1141 aa23.72■■□□□ 1.39
EDC3-208ENST00000565602 ERVV-2B6SEH9 535 aa23.71■■□□□ 1.39
EDC3-208ENST00000565602 TEFQ10587 303 aa23.71■■□□□ 1.39
EDC3-208ENST00000565602 TAF7Q15545 349 aaPredicted RBP23.71■■□□□ 1.39
EDC3-208ENST00000565602 MBIPQ9NS73 344 aa23.71■■□□□ 1.39
EDC3-208ENST00000565602 LAS1LQ9Y4W2 734 aaKnown RBP23.71■■□□□ 1.39
EDC3-208ENST00000565602 MIS18AQ9NYP9 233 aa23.7■■□□□ 1.39
EDC3-208ENST00000565602 BCL9O00512 1426 aa23.7■■□□□ 1.38
EDC3-208ENST00000565602 NFATC2IPQ8NCF5 419 aa23.7■■□□□ 1.38
EDC3-208ENST00000565602 EP400Q96L91 3159 aa23.7■■□□□ 1.38
EDC3-208ENST00000565602 NHSQ6T4R5 1651 aa23.7■■□□□ 1.38
EDC3-208ENST00000565602 UBR2Q8IWV8 1755 aa23.69■■□□□ 1.38
EDC3-208ENST00000565602 FAM182BQ5T319 152 aa23.68■■□□□ 1.38
EDC3-208ENST00000565602 BABAM1Q9NWV8 329 aa23.68■■□□□ 1.38
EDC3-208ENST00000565602 CABP4P57796 275 aa23.67■■□□□ 1.38
EDC3-208ENST00000565602 FRAT1Q92837 279 aaPredicted RBP23.67■■□□□ 1.38
EDC3-208ENST00000565602 BCL2L13Q9BXK5 485 aa23.66■■□□□ 1.38
EDC3-208ENST00000565602 TSPYL4Q9UJ04 414 aa23.66■■□□□ 1.38
EDC3-208ENST00000565602 BTBD11A6QL63 1104 aa23.65■■□□□ 1.38
EDC3-208ENST00000565602 KRT27Q7Z3Y8 459 aa23.65■■□□□ 1.38
EDC3-208ENST00000565602 KCNQ3O43525 872 aa23.64■■□□□ 1.38
EDC3-208ENST00000565602 PRIM1P49642 420 aaKnown RBP23.64■■□□□ 1.37
EDC3-208ENST00000565602 BTAF1O14981 1849 aa23.63■■□□□ 1.37
EDC3-208ENST00000565602 PIGBQ92521 554 aa23.63■■□□□ 1.37
EDC3-208ENST00000565602 ACSBG1Q96GR2 724 aa23.63■■□□□ 1.37
EDC3-208ENST00000565602 SMC4Q9NTJ3 1288 aa23.63■■□□□ 1.37
EDC3-208ENST00000565602 TMOD3Q9NYL9 352 aa23.63■■□□□ 1.37
EDC3-208ENST00000565602 KCPQ6ZWJ8 1503 aa23.62■■□□□ 1.37
EDC3-208ENST00000565602 SLC39A6Q13433 755 aa23.62■■□□□ 1.37
EDC3-208ENST00000565602 C5P01031 1676 aa23.61■■□□□ 1.37
EDC3-208ENST00000565602 KCNQ2O43526 872 aa23.61■■□□□ 1.37
EDC3-208ENST00000565602 KRT24Q2M2I5 525 aa23.61■■□□□ 1.37
EDC3-208ENST00000565602 PANK1Q8TE04 598 aa23.61■■□□□ 1.37
EDC3-208ENST00000565602 ZNF790Q6PG37 636 aa23.6■■□□□ 1.37
EDC3-208ENST00000565602 SSH1Q8WYL5 1049 aa23.6■■□□□ 1.37
EDC3-208ENST00000565602 ZNF428Q96B54 188 aa23.6■■□□□ 1.37
EDC3-208ENST00000565602 ZKSCAN2Q63HK3 967 aa23.6■■□□□ 1.37
EDC3-208ENST00000565602 C8orf58Q8NAV2 365 aa23.6■■□□□ 1.37
EDC3-208ENST00000565602 EIF4A1P60842 406 aaKnown RBP23.59■■□□□ 1.37
EDC3-208ENST00000565602 ALDH1L2Q3SY69 923 aa23.59■■□□□ 1.37
EDC3-208ENST00000565602 SYTL4Q96C24 671 aaPredicted RBP23.59■■□□□ 1.37
EDC3-208ENST00000565602 HEG1Q9ULI3 1381 aa23.59■■□□□ 1.37
EDC3-208ENST00000565602 PTF1AQ7RTS3 328 aa23.58■■□□□ 1.37
EDC3-208ENST00000565602 TSPYL6Q8N831 410 aa23.58■■□□□ 1.37
EDC3-208ENST00000565602 KDM2BQ8NHM5 1336 aa23.58■■□□□ 1.37
EDC3-208ENST00000565602 COG6Q9Y2V7 657 aa23.58■■□□□ 1.37
EDC3-208ENST00000565602 KIF16BQ96L93 1317 aa23.57■■□□□ 1.36
EDC3-208ENST00000565602 ATG3Q9NT62 314 aa23.57■■□□□ 1.36
EDC3-208ENST00000565602 MS4A1P11836 297 aa23.56■■□□□ 1.36
EDC3-208ENST00000565602 CENPQQ7L2Z9 268 aaPredicted RBP23.56■■□□□ 1.36
EDC3-208ENST00000565602 ASAP1Q9ULH1 1129 aa23.56■■□□□ 1.36
EDC3-208ENST00000565602 TNNQ9UQP3 1299 aa23.56■■□□□ 1.36
EDC3-208ENST00000565602 RLBP1P12271 317 aa23.56■■□□□ 1.36
EDC3-208ENST00000565602 FAM196AQ6ZSG2 479 aa23.56■■□□□ 1.36
EDC3-208ENST00000565602 LAMB4A4D0S4 1761 aa23.55■■□□□ 1.36
EDC3-208ENST00000565602 AAMPQ13685 434 aa23.55■■□□□ 1.36
EDC3-208ENST00000565602 ZNF496Q96IT1 587 aaPredicted RBP23.54■■□□□ 1.36
EDC3-208ENST00000565602 CLUAP1Q96AJ1 413 aa23.53■■□□□ 1.36
EDC3-208ENST00000565602 LY75O60449 1722 aa23.53■■□□□ 1.36
EDC3-208ENST00000565602 ELL2O00472 640 aaPredicted RBP23.53■■□□□ 1.36
EDC3-208ENST00000565602 VAMP4O75379 141 aa23.53■■□□□ 1.36
EDC3-208ENST00000565602 TWISTNBQ3B726 338 aaPredicted RBP23.53■■□□□ 1.36
EDC3-208ENST00000565602 FTSJ3Q8IY81 847 aaKnown RBP23.53■■□□□ 1.36
EDC3-208ENST00000565602 DZIP1LQ8IYY4 767 aaKnown RBP23.53■■□□□ 1.36
EDC3-208ENST00000565602 TTC5Q8N0Z6 440 aa23.53■■□□□ 1.36
EDC3-208ENST00000565602 TJP1Q07157 1748 aa23.53■■□□□ 1.36
EDC3-208ENST00000565602 CICQ96RK0 1608 aaPredicted RBP23.52■■□□□ 1.36
EDC3-208ENST00000565602 TNS1Q9HBL0 1735 aaKnown RBP23.52■■□□□ 1.36
EDC3-208ENST00000565602 RBM19Q9Y4C8 960 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms