RNA–Protein interactions for RNA: ENST00000565401.1

AC009041.1-201, humanhuman

TSL 4 BASIC

Gene AC009041.1, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-201ENST00000565401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.54■□□□□ 0.56
AC009041.1-201ENST00000565401 PARP3Q9Y6F1 533 aa18.54■□□□□ 0.56
AC009041.1-201ENST00000565401 KDM6AO15550 1401 aaPredicted RBP18.54■□□□□ 0.56
AC009041.1-201ENST00000565401 MEGF6O75095 1541 aa18.54■□□□□ 0.56
AC009041.1-201ENST00000565401 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
AC009041.1-201ENST00000565401 USP31Q70CQ4 1352 aa18.53■□□□□ 0.56
AC009041.1-201ENST00000565401 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
AC009041.1-201ENST00000565401 POTEIP0CG38 1075 aa18.52■□□□□ 0.56
AC009041.1-201ENST00000565401 POTEJP0CG39 1038 aa18.52■□□□□ 0.56
AC009041.1-201ENST00000565401 IP6K1Q92551 441 aa18.52■□□□□ 0.56
AC009041.1-201ENST00000565401 C4AP0C0L4 1744 aa18.52■□□□□ 0.55
AC009041.1-201ENST00000565401 TMEM88BA6NKF7 163 aa18.51■□□□□ 0.55
AC009041.1-201ENST00000565401 PASKQ96RG2 1323 aa18.5■□□□□ 0.55
AC009041.1-201ENST00000565401 LOC102724428A0A0B4J2F2 783 aa18.5■□□□□ 0.55
AC009041.1-201ENST00000565401 CHRNA5P30532 468 aa18.5■□□□□ 0.55
AC009041.1-201ENST00000565401 SIK1P57059 783 aa18.5■□□□□ 0.55
AC009041.1-201ENST00000565401 PRPF38BQ5VTL8 546 aaKnown RBP18.5■□□□□ 0.55
AC009041.1-201ENST00000565401 DPY19L2Q6NUT2 758 aa18.5■□□□□ 0.55
AC009041.1-201ENST00000565401 NME9Q86XW9 330 aa18.5■□□□□ 0.55
AC009041.1-201ENST00000565401 NBPF1Q3BBV0 1214 aa18.49■□□□□ 0.55
AC009041.1-201ENST00000565401 TRAPPC3LQ5T215 181 aa18.49■□□□□ 0.55
AC009041.1-201ENST00000565401 FAM208AQ9UK61 1670 aaKnown RBP18.49■□□□□ 0.55
AC009041.1-201ENST00000565401 MCOLN1Q9GZU1 580 aa18.48■□□□□ 0.55
AC009041.1-201ENST00000565401 ITPK1Q13572 414 aa18.47■□□□□ 0.55
AC009041.1-201ENST00000565401 EVC2Q86UK5 1308 aa18.47■□□□□ 0.55
AC009041.1-201ENST00000565401 GYS1P13807 737 aa18.46■□□□□ 0.55
AC009041.1-201ENST00000565401 DEFB115Q30KQ5 88 aa18.46■□□□□ 0.55
AC009041.1-201ENST00000565401 PIGBQ92521 554 aa18.46■□□□□ 0.55
AC009041.1-201ENST00000565401 WDR33Q9C0J8 1336 aaKnown RBP18.46■□□□□ 0.55
AC009041.1-201ENST00000565401 BEGAINQ9BUH8 593 aa18.45■□□□□ 0.54
AC009041.1-201ENST00000565401 RTCBQ9Y3I0 505 aaKnown RBP18.45■□□□□ 0.54
AC009041.1-201ENST00000565401 TIAM2Q8IVF5 1701 aa18.44■□□□□ 0.54
AC009041.1-201ENST00000565401 RASSF10A6NK89 507 aa18.44■□□□□ 0.54
AC009041.1-201ENST00000565401 ATP6V1AP38606 617 aa18.44■□□□□ 0.54
AC009041.1-201ENST00000565401 ARHGEF1Q92888 912 aaKnown RBP18.44■□□□□ 0.54
AC009041.1-201ENST00000565401 CGNL1Q0VF96 1302 aa18.44■□□□□ 0.54
AC009041.1-201ENST00000565401 RAPGEF4Q8WZA2 1011 aa18.43■□□□□ 0.54
AC009041.1-201ENST00000565401 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
AC009041.1-201ENST00000565401 PCDH11XQ9BZA7 1347 aa18.43■□□□□ 0.54
AC009041.1-201ENST00000565401 PCDH11YQ9BZA8 1340 aa18.43■□□□□ 0.54
AC009041.1-201ENST00000565401 RGPD2P0DJD1 1756 aa18.41■□□□□ 0.54
AC009041.1-201ENST00000565401 RFC4P35249 363 aa18.41■□□□□ 0.54
AC009041.1-201ENST00000565401 USHBP1Q8N6Y0 703 aa18.41■□□□□ 0.54
AC009041.1-201ENST00000565401 TSKSQ9UJT2 592 aa18.41■□□□□ 0.54
AC009041.1-201ENST00000565401 ITGB4P16144 1822 aa18.4■□□□□ 0.54
AC009041.1-201ENST00000565401 CCDC88AQ3V6T2 1871 aa18.4■□□□□ 0.54
AC009041.1-201ENST00000565401 ITGBL1O95965 494 aaPredicted RBP18.4■□□□□ 0.54
AC009041.1-201ENST00000565401 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
AC009041.1-201ENST00000565401 LDHDQ86WU2 507 aa18.4■□□□□ 0.54
AC009041.1-201ENST00000565401 CYP27B1O15528 508 aa18.39■□□□□ 0.53
AC009041.1-201ENST00000565401 NBPF6Q5VWK0 638 aa18.39■□□□□ 0.53
AC009041.1-201ENST00000565401 NBPF4Q96M43 638 aa18.39■□□□□ 0.53
AC009041.1-201ENST00000565401 NFKBIEO00221 500 aa18.38■□□□□ 0.53
AC009041.1-201ENST00000565401 ADRA2BP18089 450 aa18.38■□□□□ 0.53
AC009041.1-201ENST00000565401 HOXC9P31274 260 aa18.38■□□□□ 0.53
AC009041.1-201ENST00000565401 MON2Q7Z3U7 1717 aa18.37■□□□□ 0.53
AC009041.1-201ENST00000565401 DDR1Q08345 913 aa18.37■□□□□ 0.53
AC009041.1-201ENST00000565401 ASAP1Q9ULH1 1129 aa18.37■□□□□ 0.53
AC009041.1-201ENST00000565401 ABT1Q9ULW3 272 aaKnown RBP18.37■□□□□ 0.53
AC009041.1-201ENST00000565401 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
AC009041.1-201ENST00000565401 CD163L1Q9NR16 1453 aa18.37■□□□□ 0.53
AC009041.1-201ENST00000565401 DDNO94850 711 aaPredicted RBP18.36■□□□□ 0.53
AC009041.1-201ENST00000565401 AMPHP49418 695 aa18.36■□□□□ 0.53
AC009041.1-201ENST00000565401 SOX10P56693 466 aa18.36■□□□□ 0.53
AC009041.1-201ENST00000565401 DGKZQ13574 1117 aa18.36■□□□□ 0.53
AC009041.1-201ENST00000565401 ERFEQ4G0M1 354 aa18.36■□□□□ 0.53
AC009041.1-201ENST00000565401 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
AC009041.1-201ENST00000565401 MAP3K19Q56UN5 1328 aa18.34■□□□□ 0.53
AC009041.1-201ENST00000565401 PAXIP1Q6ZW49 1069 aaPredicted RBP18.33■□□□□ 0.52
AC009041.1-201ENST00000565401 CASP8AP2Q9UKL3 1982 aa18.33■□□□□ 0.52
AC009041.1-201ENST00000565401 IQCA1LA6NCM1 817 aa18.32■□□□□ 0.52
AC009041.1-201ENST00000565401 GRM1Q13255 1194 aa18.32■□□□□ 0.52
AC009041.1-201ENST00000565401 FKBP8Q14318 412 aa18.32■□□□□ 0.52
AC009041.1-201ENST00000565401 TTLL6Q8N841 843 aa18.32■□□□□ 0.52
AC009041.1-201ENST00000565401 CAPNS2Q96L46 248 aa18.32■□□□□ 0.52
AC009041.1-201ENST00000565401 TAF1DQ9H5J8 278 aaPredicted RBP18.32■□□□□ 0.52
AC009041.1-201ENST00000565401 TMOD3Q9NYL9 352 aa18.32■□□□□ 0.52
AC009041.1-201ENST00000565401 RPS6KA4O75676 772 aa18.31■□□□□ 0.52
AC009041.1-201ENST00000565401 EAPPQ56P03 285 aaPredicted RBP18.31■□□□□ 0.52
AC009041.1-201ENST00000565401 GPR101Q96P66 508 aaPredicted RBP18.31■□□□□ 0.52
AC009041.1-201ENST00000565401 SRP68Q9UHB9 627 aaKnown RBP18.31■□□□□ 0.52
AC009041.1-201ENST00000565401 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
AC009041.1-201ENST00000565401 FBLN1P23142 703 aa18.3■□□□□ 0.52
AC009041.1-201ENST00000565401 RC3H1Q5TC82 1133 aaKnown RBP18.3■□□□□ 0.52
AC009041.1-201ENST00000565401 POLRMTO00411 1230 aaKnown RBP18.29■□□□□ 0.52
AC009041.1-201ENST00000565401 ECE1P42892 770 aa18.29■□□□□ 0.52
AC009041.1-201ENST00000565401 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
AC009041.1-201ENST00000565401 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
AC009041.1-201ENST00000565401 THSD7BQ9C0I4 1608 aa18.27■□□□□ 0.52
AC009041.1-201ENST00000565401 CNTNAP4Q9C0A0 1308 aa18.27■□□□□ 0.52
AC009041.1-201ENST00000565401 NKX1-1Q15270 411 aaPredicted RBP18.27■□□□□ 0.52
AC009041.1-201ENST00000565401 CYP4F22Q6NT55 531 aa18.27■□□□□ 0.52
AC009041.1-201ENST00000565401 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
AC009041.1-201ENST00000565401 MAP1SQ66K74 1059 aaPredicted RBP18.26■□□□□ 0.51
AC009041.1-201ENST00000565401 HDGFL2Q7Z4V5 671 aaPredicted RBP18.26■□□□□ 0.51
AC009041.1-201ENST00000565401 SLC4A9Q96Q91 983 aa18.26■□□□□ 0.51
AC009041.1-201ENST00000565401 LTBP1Q14766 1721 aa18.26■□□□□ 0.51
AC009041.1-201ENST00000565401 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
AC009041.1-201ENST00000565401 CA12O43570 354 aa18.25■□□□□ 0.51
AC009041.1-201ENST00000565401 HABP4Q5JVS0 413 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms