RNA–Protein interactions for RNA: ENST00000565401.1

AC009041.1-201, humanhuman

TSL 4 BASIC

Gene AC009041.1, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-201ENST00000565401 NISCHQ9Y2I1 1504 aa33.5■■■□□ 2.95
AC009041.1-201ENST00000565401 ABCC9O60706 1549 aa32.09■■■□□ 2.73
AC009041.1-201ENST00000565401 DNAJC5BQ9UF47 199 aa31.39■■■□□ 2.62
AC009041.1-201ENST00000565401 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
AC009041.1-201ENST00000565401 RB1CC1Q8TDY2 1594 aa29.85■■■□□ 2.37
AC009041.1-201ENST00000565401 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
AC009041.1-201ENST00000565401 PABPN1Q86U42 306 aaKnown RBP eCLIP29.72■■■□□ 2.35
AC009041.1-201ENST00000565401 NACADO15069 1562 aa29.3■■■□□ 2.28
AC009041.1-201ENST00000565401 UNC13AQ9UPW8 1703 aa29.12■■■□□ 2.25
AC009041.1-201ENST00000565401 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
AC009041.1-201ENST00000565401 BICRAQ9NZM4 1560 aa29.04■■■□□ 2.24
AC009041.1-201ENST00000565401 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
AC009041.1-201ENST00000565401 CC2D2AQ9P2K1 1620 aa28.86■■■□□ 2.21
AC009041.1-201ENST00000565401 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
AC009041.1-201ENST00000565401 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.14
AC009041.1-201ENST00000565401 MYO15BQ96JP2 1530 aa28.4■■■□□ 2.14
AC009041.1-201ENST00000565401 CUX2O14529 1486 aa28.17■■■□□ 2.1
AC009041.1-201ENST00000565401 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
AC009041.1-201ENST00000565401 SCRIBQ14160 1630 aa27.88■■■□□ 2.05
AC009041.1-201ENST00000565401 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
AC009041.1-201ENST00000565401 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
AC009041.1-201ENST00000565401 ZCCHC6Q5VYS8 1495 aaKnown RBP27.45■■□□□ 1.99
AC009041.1-201ENST00000565401 NESP48681 1621 aa27.16■■□□□ 1.94
AC009041.1-201ENST00000565401 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
AC009041.1-201ENST00000565401 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
AC009041.1-201ENST00000565401 SMARCA2P51531 1590 aa26.87■■□□□ 1.89
AC009041.1-201ENST00000565401 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
AC009041.1-201ENST00000565401 OSCARQ8IYS5 282 aa26.74■■□□□ 1.87
AC009041.1-201ENST00000565401 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
AC009041.1-201ENST00000565401 KIF21AQ7Z4S6 1674 aa26.69■■□□□ 1.86
AC009041.1-201ENST00000565401 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
AC009041.1-201ENST00000565401 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
AC009041.1-201ENST00000565401 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
AC009041.1-201ENST00000565401 PDS5BQ9NTI5 1447 aa26.63■■□□□ 1.85
AC009041.1-201ENST00000565401 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
AC009041.1-201ENST00000565401 MRC2Q9UBG0 1479 aa26.47■■□□□ 1.83
AC009041.1-201ENST00000565401 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
AC009041.1-201ENST00000565401 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
AC009041.1-201ENST00000565401 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
AC009041.1-201ENST00000565401 WDR62O43379 1518 aa26.41■■□□□ 1.82
AC009041.1-201ENST00000565401 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
AC009041.1-201ENST00000565401 TRHP20396 242 aaPredicted RBP26.41■■□□□ 1.82
AC009041.1-201ENST00000565401 ARHGEF11O15085 1522 aa26.25■■□□□ 1.79
AC009041.1-201ENST00000565401 CADPSQ9ULU8 1353 aa26.24■■□□□ 1.79
AC009041.1-201ENST00000565401 CYB5RLQ6IPT4 315 aa26.23■■□□□ 1.79
AC009041.1-201ENST00000565401 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
AC009041.1-201ENST00000565401 CEP164Q9UPV0 1460 aa26.08■■□□□ 1.77
AC009041.1-201ENST00000565401 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
AC009041.1-201ENST00000565401 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
AC009041.1-201ENST00000565401 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
AC009041.1-201ENST00000565401 URB2Q14146 1524 aaKnown RBP25.81■■□□□ 1.72
AC009041.1-201ENST00000565401 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
AC009041.1-201ENST00000565401 ZNF608Q9ULD9 1512 aaPredicted RBP25.74■■□□□ 1.71
AC009041.1-201ENST00000565401 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
AC009041.1-201ENST00000565401 CFTRP13569 1480 aa25.62■■□□□ 1.69
AC009041.1-201ENST00000565401 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
AC009041.1-201ENST00000565401 CHD1O14646 1710 aa25.53■■□□□ 1.68
AC009041.1-201ENST00000565401 FBLN2P98095 1184 aa25.52■■□□□ 1.68
AC009041.1-201ENST00000565401 EIF4G3O43432 1585 aaKnown RBP25.46■■□□□ 1.67
AC009041.1-201ENST00000565401 WIZO95785 1651 aa25.42■■□□□ 1.66
AC009041.1-201ENST00000565401 AQRO60306 1485 aaKnown RBP eCLIP25.35■■□□□ 1.65
AC009041.1-201ENST00000565401 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
AC009041.1-201ENST00000565401 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
AC009041.1-201ENST00000565401 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
AC009041.1-201ENST00000565401 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
AC009041.1-201ENST00000565401 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
AC009041.1-201ENST00000565401 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
AC009041.1-201ENST00000565401 KDM4FA0A1W2PPD8 638 aa25.08■■□□□ 1.61
AC009041.1-201ENST00000565401 SYNJ1O43426 1573 aa25.08■■□□□ 1.61
AC009041.1-201ENST00000565401 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
AC009041.1-201ENST00000565401 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
AC009041.1-201ENST00000565401 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
AC009041.1-201ENST00000565401 TOP2AP11388 1531 aaKnown RBP24.99■■□□□ 1.59
AC009041.1-201ENST00000565401 TDRD9Q8NDG6 1382 aaKnown RBP24.99■■□□□ 1.59
AC009041.1-201ENST00000565401 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
AC009041.1-201ENST00000565401 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
AC009041.1-201ENST00000565401 MAGI1Q96QZ7 1491 aaPredicted RBP24.86■■□□□ 1.57
AC009041.1-201ENST00000565401 KIF13AQ9H1H9 1805 aa24.86■■□□□ 1.57
AC009041.1-201ENST00000565401 SOGA1O94964 1423 aa24.82■■□□□ 1.56
AC009041.1-201ENST00000565401 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
AC009041.1-201ENST00000565401 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
AC009041.1-201ENST00000565401 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
AC009041.1-201ENST00000565401 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
AC009041.1-201ENST00000565401 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
AC009041.1-201ENST00000565401 FAM69CQ0P6D2 419 aa24.7■■□□□ 1.54
AC009041.1-201ENST00000565401 KDM6BO15054 1643 aa24.62■■□□□ 1.53
AC009041.1-201ENST00000565401 FBXO41Q8TF61 875 aa24.62■■□□□ 1.53
AC009041.1-201ENST00000565401 HECW2Q9P2P5 1572 aa24.59■■□□□ 1.53
AC009041.1-201ENST00000565401 ABCC10Q5T3U5 1492 aa24.58■■□□□ 1.53
AC009041.1-201ENST00000565401 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.53
AC009041.1-201ENST00000565401 CEP170Q5SW79 1584 aa24.57■■□□□ 1.52
AC009041.1-201ENST00000565401 ADGRL1O94910 1474 aa24.5■■□□□ 1.51
AC009041.1-201ENST00000565401 PBRM1Q86U86 1689 aa24.48■■□□□ 1.51
AC009041.1-201ENST00000565401 DIP2BQ9P265 1576 aa24.45■■□□□ 1.5
AC009041.1-201ENST00000565401 NPM1P06748 294 aaKnown RBP eCLIP24.43■■□□□ 1.5
AC009041.1-201ENST00000565401 GRIN2AQ12879 1464 aa24.42■■□□□ 1.5
AC009041.1-201ENST00000565401 LMTK3Q96Q04 1460 aa24.4■■□□□ 1.5
AC009041.1-201ENST00000565401 SHROOM2Q13796 1616 aa24.39■■□□□ 1.5
AC009041.1-201ENST00000565401 NUP160Q12769 1436 aa24.39■■□□□ 1.5
AC009041.1-201ENST00000565401 MAPKBP1O60336 1514 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms