RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TMPOP42166 694 aaKnown RBP14.56□□□□□ -0.08
SF3B3-205ENST00000564899 NFE2L2Q16236 605 aa14.56□□□□□ -0.08
SF3B3-205ENST00000564899 PELP1Q8IZL8 1130 aaKnown RBP14.56□□□□□ -0.08
SF3B3-205ENST00000564899 PNPLA7Q6ZV29 1317 aa14.56□□□□□ -0.08
SF3B3-205ENST00000564899 GIGYF1O75420 1035 aaPredicted RBP14.55□□□□□ -0.08
SF3B3-205ENST00000564899 YBX3P16989 372 aaKnown RBP eCLIP14.55□□□□□ -0.083e-11■■□□□ 11.5
SF3B3-205ENST00000564899 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
SF3B3-205ENST00000564899 RIPK4P57078 832 aa14.54□□□□□ -0.08
SF3B3-205ENST00000564899 QSER1Q2KHR3 1735 aa14.54□□□□□ -0.08
SF3B3-205ENST00000564899 RGPD2P0DJD1 1756 aa14.54□□□□□ -0.08
SF3B3-205ENST00000564899 ZNF521Q96K83 1311 aa14.53□□□□□ -0.08
SF3B3-205ENST00000564899 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
SF3B3-205ENST00000564899 GAS2L2Q8NHY3 880 aa14.53□□□□□ -0.08
SF3B3-205ENST00000564899 MTHFSDQ2M296 383 aaKnown RBP14.52□□□□□ -0.09
SF3B3-205ENST00000564899 WWC1Q8IX03 1113 aa14.52□□□□□ -0.09
SF3B3-205ENST00000564899 RAPGEF4Q8WZA2 1011 aa14.52□□□□□ -0.09
SF3B3-205ENST00000564899 IL2RBP14784 551 aa14.51□□□□□ -0.09
SF3B3-205ENST00000564899 LMOD3Q0VAK6 560 aa14.51□□□□□ -0.09
SF3B3-205ENST00000564899 MEGF6O75095 1541 aa14.51□□□□□ -0.09
SF3B3-205ENST00000564899 PLEKHG2Q9H7P9 1386 aa14.5□□□□□ -0.09
SF3B3-205ENST00000564899 DOT1LQ8TEK3 1739 aa14.5□□□□□ -0.09
SF3B3-205ENST00000564899 TATP17735 454 aaPredicted RBP14.5□□□□□ -0.09
SF3B3-205ENST00000564899 GOLGA2Q08379 1002 aa14.5□□□□□ -0.09
SF3B3-205ENST00000564899 AMOTQ4VCS5 1084 aa14.5□□□□□ -0.09
SF3B3-205ENST00000564899 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
SF3B3-205ENST00000564899 TRIM35Q9UPQ4 493 aa14.5□□□□□ -0.09
SF3B3-205ENST00000564899 WDR63Q8IWG1 891 aa14.49□□□□□ -0.09
SF3B3-205ENST00000564899 CDCA7LQ96GN5 454 aa14.48□□□□□ -0.09
SF3B3-205ENST00000564899 ATP10DQ9P241 1426 aa14.48□□□□□ -0.09
SF3B3-205ENST00000564899 LY75O60449 1722 aa14.47□□□□□ -0.09
SF3B3-205ENST00000564899 MSL1Q68DK7 614 aa14.47□□□□□ -0.09
SF3B3-205ENST00000564899 ZNF530Q6P9A1 599 aaPredicted RBP14.47□□□□□ -0.09
SF3B3-205ENST00000564899 DDX54Q8TDD1 881 aaKnown RBP14.47□□□□□ -0.09
SF3B3-205ENST00000564899 GNAT3A8MTJ3 354 aa14.46□□□□□ -0.09
SF3B3-205ENST00000564899 E9PSI1 815 aa14.46□□□□□ -0.09
SF3B3-205ENST00000564899 RTF1Q92541 710 aaKnown RBP14.46□□□□□ -0.09
SF3B3-205ENST00000564899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.46□□□□□ -0.09
SF3B3-205ENST00000564899 TFCP2L1Q9NZI6 479 aa14.46□□□□□ -0.09
SF3B3-205ENST00000564899 SPG7Q9UQ90 795 aa14.46□□□□□ -0.09
SF3B3-205ENST00000564899 HTATSF1O43719 755 aaKnown RBP14.45□□□□□ -0.1
SF3B3-205ENST00000564899 POLD1P28340 1107 aa14.45□□□□□ -0.1
SF3B3-205ENST00000564899 PRIM1P49642 420 aaKnown RBP14.45□□□□□ -0.1
SF3B3-205ENST00000564899 CALD1Q05682 793 aaKnown RBP14.45□□□□□ -0.1
SF3B3-205ENST00000564899 SLFN5Q08AF3 891 aa14.45□□□□□ -0.1
SF3B3-205ENST00000564899 DCTN1Q14203 1278 aa14.45□□□□□ -0.1
SF3B3-205ENST00000564899 C1orf141Q5JVX7 400 aa14.45□□□□□ -0.1
SF3B3-205ENST00000564899 SLC16A10Q8TF71 515 aa14.45□□□□□ -0.1
SF3B3-205ENST00000564899 THUMPD2Q9BTF0 503 aaKnown RBP14.45□□□□□ -0.1
SF3B3-205ENST00000564899 IL16Q14005 1332 aa14.44□□□□□ -0.1
SF3B3-205ENST00000564899 AKAP4Q5JQC9 854 aa14.44□□□□□ -0.1
SF3B3-205ENST00000564899 SLC27A3Q5K4L6 730 aa14.44□□□□□ -0.1
SF3B3-205ENST00000564899 MCM10Q7L590 875 aa14.44□□□□□ -0.1
SF3B3-205ENST00000564899 COL23A1Q86Y22 540 aaPredicted RBP14.44□□□□□ -0.1
SF3B3-205ENST00000564899 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
SF3B3-205ENST00000564899 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
SF3B3-205ENST00000564899 WWC3Q9ULE0 1092 aa14.43□□□□□ -0.1
SF3B3-205ENST00000564899 PKD1L3Q7Z443 1732 aa14.42□□□□□ -0.1
SF3B3-205ENST00000564899 DUSP27Q5VZP5 1158 aa14.42□□□□□ -0.1
SF3B3-205ENST00000564899 AMIGO3Q86WK7 504 aa14.42□□□□□ -0.1
SF3B3-205ENST00000564899 ZCRB1Q8TBF4 217 aaKnown RBP14.42□□□□□ -0.1
SF3B3-205ENST00000564899 ZNF526Q8TF50 670 aaPredicted RBP14.42□□□□□ -0.1
SF3B3-205ENST00000564899 MYH16Q9H6N6 1097 aa14.42□□□□□ -0.1
SF3B3-205ENST00000564899 ADCY9O60503 1353 aa14.42□□□□□ -0.1
SF3B3-205ENST00000564899 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
SF3B3-205ENST00000564899 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
SF3B3-205ENST00000564899 DLG5Q8TDM6 1919 aa14.41□□□□□ -0.1
SF3B3-205ENST00000564899 PHKG2P15735 406 aa14.41□□□□□ -0.1
SF3B3-205ENST00000564899 SMIM5Q71RC9 77 aa14.41□□□□□ -0.1
SF3B3-205ENST00000564899 TRMT2AQ8IZ69 625 aaKnown RBP14.41□□□□□ -0.1
SF3B3-205ENST00000564899 IFNL2Q8IZJ0 200 aa14.41□□□□□ -0.1
SF3B3-205ENST00000564899 IFT57Q9NWB7 429 aa14.41□□□□□ -0.1
SF3B3-205ENST00000564899 GNAI1P63096 354 aa14.4□□□□□ -0.1
SF3B3-205ENST00000564899 IL17REQ8NFR9 667 aa14.4□□□□□ -0.1
SF3B3-205ENST00000564899 CCNL1Q9UK58 526 aaPredicted RBP14.4□□□□□ -0.1
SF3B3-205ENST00000564899 LAS1LQ9Y4W2 734 aaKnown RBP14.4□□□□□ -0.1
SF3B3-205ENST00000564899 FANCIQ9NVI1 1328 aa14.4□□□□□ -0.1
SF3B3-205ENST00000564899 TOGARAM1Q9Y4F4 1720 aa14.39□□□□□ -0.11
SF3B3-205ENST00000564899 CYP27B1O15528 508 aa14.39□□□□□ -0.11
SF3B3-205ENST00000564899 MSH5O43196 834 aa14.39□□□□□ -0.11
SF3B3-205ENST00000564899 HSP90AB1P08238 724 aaKnown RBP14.39□□□□□ -0.11
SF3B3-205ENST00000564899 MPRIPQ6WCQ1 1025 aa14.39□□□□□ -0.11
SF3B3-205ENST00000564899 TSR2Q969E8 191 aaKnown RBP14.39□□□□□ -0.11
SF3B3-205ENST00000564899 C5P01031 1676 aa14.39□□□□□ -0.11
SF3B3-205ENST00000564899 CEMIPQ8WUJ3 1361 aa14.38□□□□□ -0.11
SF3B3-205ENST00000564899 RNMTO43148 476 aaKnown RBP14.38□□□□□ -0.11
SF3B3-205ENST00000564899 CFAP44Q96MT7 982 aa14.38□□□□□ -0.11
SF3B3-205ENST00000564899 PCNTO95613 3336 aa14.37□□□□□ -0.11
SF3B3-205ENST00000564899 GRIN3BO60391 1043 aa14.37□□□□□ -0.11
SF3B3-205ENST00000564899 ZNF853P0CG23 659 aa14.37□□□□□ -0.11
SF3B3-205ENST00000564899 LGR6Q9HBX8 967 aa14.37□□□□□ -0.11
SF3B3-205ENST00000564899 KDM6AO15550 1401 aaPredicted RBP14.37□□□□□ -0.11
SF3B3-205ENST00000564899 TAF1LQ8IZX4 1826 aa14.36□□□□□ -0.11
SF3B3-205ENST00000564899 HSPA6P17066 643 aa14.36□□□□□ -0.11
SF3B3-205ENST00000564899 TEFQ10587 303 aa14.36□□□□□ -0.11
SF3B3-205ENST00000564899 DCAF5Q96JK2 942 aa14.36□□□□□ -0.11
SF3B3-205ENST00000564899 GPBP1L1Q9HC44 474 aaPredicted RBP14.36□□□□□ -0.11
SF3B3-205ENST00000564899 MBIPQ9NS73 344 aa14.36□□□□□ -0.11
SF3B3-205ENST00000564899 CHL1O00533 1208 aa14.35□□□□□ -0.11
SF3B3-205ENST00000564899 TSPYL4Q9UJ04 414 aa14.35□□□□□ -0.11
SF3B3-205ENST00000564899 ADAMTS7Q9UKP4 1686 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms