RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 SGIP1Q9BQI5 828 aa19.93■□□□□ 0.78
SNX29-203ENST00000564111 NUDCQ9Y266 331 aa19.93■□□□□ 0.78
SNX29-203ENST00000564111 ARXQ96QS3 562 aa19.92■□□□□ 0.78
SNX29-203ENST00000564111 PDGFDQ9GZP0 370 aaPredicted RBP19.91■□□□□ 0.78
SNX29-203ENST00000564111 SSFA2P28290 1259 aa19.91■□□□□ 0.78
SNX29-203ENST00000564111 ATG3Q9NT62 314 aa19.9■□□□□ 0.78
SNX29-203ENST00000564111 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
SNX29-203ENST00000564111 ASAP1Q9ULH1 1129 aa19.88■□□□□ 0.77
SNX29-203ENST00000564111 MSH5O43196 834 aa19.88■□□□□ 0.77
SNX29-203ENST00000564111 ATP6V1AP38606 617 aa19.88■□□□□ 0.77
SNX29-203ENST00000564111 KCNQ4P56696 695 aa19.87■□□□□ 0.77
SNX29-203ENST00000564111 CNTNAP4Q9C0A0 1308 aa19.87■□□□□ 0.77
SNX29-203ENST00000564111 RC3H1Q5TC82 1133 aaKnown RBP19.87■□□□□ 0.77
SNX29-203ENST00000564111 U2SURPO15042 1029 aaKnown RBP19.86■□□□□ 0.77
SNX29-203ENST00000564111 HMOX1P09601 288 aa19.86■□□□□ 0.77
SNX29-203ENST00000564111 ADRA2BP18089 450 aa19.86■□□□□ 0.77
SNX29-203ENST00000564111 COL23A1Q86Y22 540 aaPredicted RBP19.86■□□□□ 0.77
SNX29-203ENST00000564111 TJP1Q07157 1748 aa19.86■□□□□ 0.77
SNX29-203ENST00000564111 PPP2R1AP30153 589 aa19.86■□□□□ 0.77
SNX29-203ENST00000564111 LINC00116Q8NCU8 138 aa19.84■□□□□ 0.77
SNX29-203ENST00000564111 FHDC1Q9C0D6 1143 aaPredicted RBP19.84■□□□□ 0.77
SNX29-203ENST00000564111 SLC52A2Q9HAB3 445 aa19.84■□□□□ 0.77
SNX29-203ENST00000564111 UBR2Q8IWV8 1755 aa19.84■□□□□ 0.77
SNX29-203ENST00000564111 RNMTO43148 476 aaKnown RBP19.84■□□□□ 0.77
SNX29-203ENST00000564111 SIPA1L3O60292 1781 aaPredicted RBP19.83■□□□□ 0.77
SNX29-203ENST00000564111 RBM42Q9BTD8 480 aaKnown RBP19.83■□□□□ 0.76
SNX29-203ENST00000564111 SYT17Q9BSW7 474 aa19.82■□□□□ 0.76
SNX29-203ENST00000564111 ITPK1Q13572 414 aa19.82■□□□□ 0.76
SNX29-203ENST00000564111 MTHFSDQ2M296 383 aaKnown RBP19.82■□□□□ 0.76
SNX29-203ENST00000564111 GNPATO15228 680 aa19.81■□□□□ 0.76
SNX29-203ENST00000564111 RTCBQ9Y3I0 505 aaKnown RBP19.81■□□□□ 0.76
SNX29-203ENST00000564111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.8■□□□□ 0.76
SNX29-203ENST00000564111 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
SNX29-203ENST00000564111 NFATC2IPQ8NCF5 419 aa19.8■□□□□ 0.76
SNX29-203ENST00000564111 GNAT3A8MTJ3 354 aa19.8■□□□□ 0.76
SNX29-203ENST00000564111 FCHSD2O94868 740 aa19.79■□□□□ 0.76
SNX29-203ENST00000564111 NEFMP07197 916 aa19.79■□□□□ 0.76
SNX29-203ENST00000564111 CNGB1Q14028 1251 aaPredicted RBP19.79■□□□□ 0.76
SNX29-203ENST00000564111 PNNQ9H307 717 aaKnown RBP19.79■□□□□ 0.76
SNX29-203ENST00000564111 CHD4Q14839 1912 aa19.79■□□□□ 0.76
SNX29-203ENST00000564111 C4AP0C0L4 1744 aa19.79■□□□□ 0.76
SNX29-203ENST00000564111 RALBP1Q15311 655 aa19.79■□□□□ 0.76
SNX29-203ENST00000564111 YY1P25490 414 aa19.78■□□□□ 0.76
SNX29-203ENST00000564111 VSIG10Q8N0Z9 540 aa19.78■□□□□ 0.76
SNX29-203ENST00000564111 RSPH6AQ9H0K4 717 aa19.78■□□□□ 0.76
SNX29-203ENST00000564111 KCPQ6ZWJ8 1503 aa19.78■□□□□ 0.76
SNX29-203ENST00000564111 RPS6KA4O75676 772 aa19.78■□□□□ 0.76
SNX29-203ENST00000564111 CD2APQ9Y5K6 639 aa19.78■□□□□ 0.76
SNX29-203ENST00000564111 TRAPPC3LQ5T215 181 aa19.77■□□□□ 0.76
SNX29-203ENST00000564111 PHF14O94880 888 aa19.76■□□□□ 0.75
SNX29-203ENST00000564111 U2AF1L5P0DN76 240 aaPredicted RBP19.76■□□□□ 0.75
SNX29-203ENST00000564111 U2AF1Q01081 240 aaKnown RBP eCLIP19.76■□□□□ 0.75
SNX29-203ENST00000564111 TEFQ10587 303 aa19.76■□□□□ 0.75
SNX29-203ENST00000564111 PRKAR2BP31323 418 aa19.76■□□□□ 0.75
SNX29-203ENST00000564111 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
SNX29-203ENST00000564111 TTC5Q8N0Z6 440 aa19.75■□□□□ 0.75
SNX29-203ENST00000564111 KIF13BQ9NQT8 1826 aa19.74■□□□□ 0.75
SNX29-203ENST00000564111 NLGN1Q8N2Q7 840 aa19.74■□□□□ 0.75
SNX29-203ENST00000564111 LGR6Q9HBX8 967 aa19.74■□□□□ 0.75
SNX29-203ENST00000564111 MYH14Q7Z406 1995 aaKnown RBP19.74■□□□□ 0.75
SNX29-203ENST00000564111 PTCD1O75127 700 aaKnown RBP19.74■□□□□ 0.75
SNX29-203ENST00000564111 SLC4A9Q96Q91 983 aa19.74■□□□□ 0.75
SNX29-203ENST00000564111 TEX13AQ9BXU3 409 aaPredicted RBP19.74■□□□□ 0.75
SNX29-203ENST00000564111 CEMIPQ8WUJ3 1361 aa19.73■□□□□ 0.75
SNX29-203ENST00000564111 MSL1Q68DK7 614 aa19.73■□□□□ 0.75
SNX29-203ENST00000564111 RFC4P35249 363 aa19.72■□□□□ 0.75
SNX29-203ENST00000564111 KLHL34Q8N239 644 aa19.72■□□□□ 0.75
SNX29-203ENST00000564111 RTF1Q92541 710 aaKnown RBP19.72■□□□□ 0.75
SNX29-203ENST00000564111 CRKLP46109 303 aaKnown RBP19.72■□□□□ 0.75
SNX29-203ENST00000564111 CCDC87Q9NVE4 849 aa19.71■□□□□ 0.75
SNX29-203ENST00000564111 GRIN3BO60391 1043 aa19.69■□□□□ 0.74
SNX29-203ENST00000564111 STARD3NLO95772 234 aa19.68■□□□□ 0.74
SNX29-203ENST00000564111 GPR162Q16538 588 aa19.68■□□□□ 0.74
SNX29-203ENST00000564111 DLG5Q8TDM6 1919 aa19.68■□□□□ 0.74
SNX29-203ENST00000564111 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
SNX29-203ENST00000564111 MYBBP1AQ9BQG0 1328 aaKnown RBP19.67■□□□□ 0.74
SNX29-203ENST00000564111 A0A087WZG4 1122 aa19.67■□□□□ 0.74
SNX29-203ENST00000564111 AMIGO3Q86WK7 504 aa19.67■□□□□ 0.74
SNX29-203ENST00000564111 FMNL2Q96PY5 1086 aa19.67■□□□□ 0.74
SNX29-203ENST00000564111 HEG1Q9ULI3 1381 aa19.67■□□□□ 0.74
SNX29-203ENST00000564111 IL17REQ8NFR9 667 aa19.67■□□□□ 0.74
SNX29-203ENST00000564111 SOS1Q07889 1333 aaPredicted RBP19.66■□□□□ 0.74
SNX29-203ENST00000564111 CYP19A1P11511 503 aaPredicted RBP19.66■□□□□ 0.74
SNX29-203ENST00000564111 ZNF790Q6PG37 636 aa19.66■□□□□ 0.74
SNX29-203ENST00000564111 DNAJC10Q8IXB1 793 aa19.66■□□□□ 0.74
SNX29-203ENST00000564111 USP42Q9H9J4 1324 aaKnown RBP19.66■□□□□ 0.74
SNX29-203ENST00000564111 MAPK8IP3Q9UPT6 1336 aa19.66■□□□□ 0.74
SNX29-203ENST00000564111 PHACTR3Q96KR7 559 aa19.66■□□□□ 0.74
SNX29-203ENST00000564111 C10orf71Q711Q0 1435 aa19.65■□□□□ 0.74
SNX29-203ENST00000564111 LAMB4A4D0S4 1761 aa19.65■□□□□ 0.74
SNX29-203ENST00000564111 PNISRQ8TF01 805 aaKnown RBP19.65■□□□□ 0.74
SNX29-203ENST00000564111 PARP3Q9Y6F1 533 aa19.65■□□□□ 0.74
SNX29-203ENST00000564111 COL15A1P39059 1388 aa19.64■□□□□ 0.74
SNX29-203ENST00000564111 MMP10P09238 476 aa19.64■□□□□ 0.74
SNX29-203ENST00000564111 SLC39A6Q13433 755 aa19.64■□□□□ 0.74
SNX29-203ENST00000564111 INTS5Q6P9B9 1019 aaKnown RBP19.64■□□□□ 0.74
SNX29-203ENST00000564111 SCN7AQ01118 1682 aa19.64■□□□□ 0.73
SNX29-203ENST00000564111 ZPR1O75312 459 aa19.64■□□□□ 0.73
SNX29-203ENST00000564111 GYS1P13807 737 aa19.64■□□□□ 0.73
SNX29-203ENST00000564111 BTBD11A6QL63 1104 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms