RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PLCH2O75038 1416 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 KDM6BO15054 1643 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
COMMD4-209ENST00000564068 PPP1R9BQ96SB3 815 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 IL16Q14005 1332 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 ZBTB7BO15156 539 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-209ENST00000564068 DTNBO60941 627 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 HSP90B2PQ58FF3 399 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 SMAP1Q8IYB5 467 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-209ENST00000564068 RASSF8Q8NHQ8 419 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 PDE1AP54750 535 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 PIP4K2BP78356 416 aa14.93□□□□□ -0.02
COMMD4-209ENST00000564068 MRPL50Q8N5N7 158 aaKnown RBP14.93□□□□□ -0.02
COMMD4-209ENST00000564068 BBXQ8WY36 941 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-209ENST00000564068 ZSCAN31Q96LW9 406 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-209ENST00000564068 VAMP4O75379 141 aa14.92□□□□□ -0.02
COMMD4-209ENST00000564068 DNAJC2Q99543 621 aaKnown RBP14.92□□□□□ -0.02
COMMD4-209ENST00000564068 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
COMMD4-209ENST00000564068 ZNF165P49910 485 aa14.92□□□□□ -0.02
COMMD4-209ENST00000564068 UBXN4Q92575 508 aa14.92□□□□□ -0.02
COMMD4-209ENST00000564068 ARHGAP45Q92619 1136 aa14.92□□□□□ -0.02
COMMD4-209ENST00000564068 GJB2P29033 226 aa14.92□□□□□ -0.02
COMMD4-209ENST00000564068 STK38Q15208 465 aa14.92□□□□□ -0.02
COMMD4-209ENST00000564068 NME9Q86XW9 330 aa14.92□□□□□ -0.02
COMMD4-209ENST00000564068 KIF18AQ8NI77 898 aa14.92□□□□□ -0.02
COMMD4-209ENST00000564068 CPLX2Q6PUV4 134 aaKnown RBP14.91□□□□□ -0.02
COMMD4-209ENST00000564068 POLR3GO15318 223 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-209ENST00000564068 ANKRD44Q8N8A2 993 aa14.91□□□□□ -0.02
COMMD4-209ENST00000564068 LRRFIP2Q9Y608 721 aaKnown RBP14.91□□□□□ -0.02
COMMD4-209ENST00000564068 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
COMMD4-209ENST00000564068 DCTPP1Q9H773 170 aa14.91□□□□□ -0.02
COMMD4-209ENST00000564068 FYB1O15117 783 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 RAB11FIP3O75154 756 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 SERPINC1P01008 464 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 TPM1P09493 284 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 CHMP4CQ96CF2 233 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 RPGRIP1LQ68CZ1 1315 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 APPP05067 770 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 ZSCAN22P10073 491 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-209ENST00000564068 ATF3P18847 181 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 KRT24Q2M2I5 525 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 TAF3Q5VWG9 929 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 CEP57L1Q8IYX8 460 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 NOC3LQ8WTT2 800 aaKnown RBP14.9□□□□□ -0.02
COMMD4-209ENST00000564068 ARHGEF12Q9NZN5 1544 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 ATAD2Q6PL18 1390 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 AACSQ86V21 672 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 NLRP6P59044 892 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 DNM1Q05193 864 aaKnown RBP14.9□□□□□ -0.02
COMMD4-209ENST00000564068 NECAB1Q8N987 351 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 ESYT1Q9BSJ8 1104 aa14.9□□□□□ -0.02
COMMD4-209ENST00000564068 NOS1P29475 1434 aa14.89□□□□□ -0.03
COMMD4-209ENST00000564068 RBM33Q96EV2 1170 aaKnown RBP14.89□□□□□ -0.03
COMMD4-209ENST00000564068 SCAND2PQ9GZW5 306 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-209ENST00000564068 INSRP06213 1382 aa14.89□□□□□ -0.03
COMMD4-209ENST00000564068 ATP2B1P20020 1258 aa14.89□□□□□ -0.03
COMMD4-209ENST00000564068 TERF1P54274 439 aa14.89□□□□□ -0.03
COMMD4-209ENST00000564068 TRIM29Q14134 588 aa14.89□□□□□ -0.03
COMMD4-209ENST00000564068 CWC15Q9P013 229 aaKnown RBP14.89□□□□□ -0.03
COMMD4-209ENST00000564068 FAM135AQ9P2D6 1515 aa14.89□□□□□ -0.03
COMMD4-209ENST00000564068 ANKRD1Q15327 319 aa14.89□□□□□ -0.03
COMMD4-209ENST00000564068 RIC3Q7Z5B4 369 aa14.89□□□□□ -0.03
COMMD4-209ENST00000564068 STK11IPQ8N1F8 1099 aa14.89□□□□□ -0.03
COMMD4-209ENST00000564068 PPFIA3O75145 1194 aa14.88□□□□□ -0.03
COMMD4-209ENST00000564068 DDX58O95786 925 aaKnown RBP14.88□□□□□ -0.03
COMMD4-209ENST00000564068 PTGS1P23219 599 aa14.88□□□□□ -0.03
COMMD4-209ENST00000564068 TSR1Q2NL82 804 aaKnown RBP14.88□□□□□ -0.03
COMMD4-209ENST00000564068 PHACTR3Q96KR7 559 aa14.88□□□□□ -0.03
COMMD4-209ENST00000564068 TCEANC2Q96MN5 208 aa14.88□□□□□ -0.03
COMMD4-209ENST00000564068 ITSN2Q9NZM3 1697 aa14.88□□□□□ -0.03
COMMD4-209ENST00000564068 U2AF2P26368 475 aaKnown RBP eCLIP14.88□□□□□ -0.03
COMMD4-209ENST00000564068 GTF2F1P35269 517 aaKnown RBP eCLIP14.88□□□□□ -0.034e-9■■■■■ 28.7
COMMD4-209ENST00000564068 OLFM4Q6UX06 510 aa14.88□□□□□ -0.03
COMMD4-209ENST00000564068 CFAP45Q9UL16 551 aa14.88□□□□□ -0.03
COMMD4-209ENST00000564068 ERCC6L2Q5T890 1561 aa14.88□□□□□ -0.03
COMMD4-209ENST00000564068 MYRIPQ8NFW9 859 aa14.87□□□□□ -0.03
COMMD4-209ENST00000564068 ZNF396Q96N95 335 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-209ENST00000564068 TMCO3Q6UWJ1 677 aa14.87□□□□□ -0.03
COMMD4-209ENST00000564068 KIF1BPQ96EK5 621 aa14.87□□□□□ -0.03
COMMD4-209ENST00000564068 C14orf93Q9H972 538 aaKnown RBP14.87□□□□□ -0.03
COMMD4-209ENST00000564068 ZNF500O60304 480 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-209ENST00000564068 GADD45BO75293 160 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-209ENST00000564068 URI1O94763 535 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-209ENST00000564068 SFPQP23246 707 aaKnown RBP eCLIP14.87□□□□□ -0.03
COMMD4-209ENST00000564068 WASHC4Q2M389 1173 aa14.87□□□□□ -0.03
COMMD4-209ENST00000564068 NOM1Q5C9Z4 860 aaKnown RBP14.87□□□□□ -0.03
COMMD4-209ENST00000564068 CEP135Q66GS9 1140 aa14.87□□□□□ -0.03
COMMD4-209ENST00000564068 GTPBP4Q9BZE4 634 aaKnown RBP14.87□□□□□ -0.03
COMMD4-209ENST00000564068 DNMT1P26358 1616 aaKnown RBP14.86□□□□□ -0.03
COMMD4-209ENST00000564068 A2MP01023 1474 aa14.86□□□□□ -0.03
COMMD4-209ENST00000564068 TRIM35Q9UPQ4 493 aa14.86□□□□□ -0.03
COMMD4-209ENST00000564068 HIP1O00291 1037 aa14.86□□□□□ -0.03
COMMD4-209ENST00000564068 TRDNQ13061 729 aa14.86□□□□□ -0.03
COMMD4-209ENST00000564068 GLRX3O76003 335 aaKnown RBP14.86□□□□□ -0.03
COMMD4-209ENST00000564068 LEKR1Q6ZMV7 388 aa14.86□□□□□ -0.03
COMMD4-209ENST00000564068 RALYLQ86SE5 291 aaKnown RBP14.86□□□□□ -0.03
COMMD4-209ENST00000564068 DACT1Q9NYF0 836 aa14.86□□□□□ -0.03
COMMD4-209ENST00000564068 BRPF1P55201 1214 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-209ENST00000564068 GUCY1B3Q02153 619 aa14.85□□□□□ -0.03
COMMD4-209ENST00000564068 ANO6Q4KMQ2 910 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms