RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 U2SURPO15042 1029 aaKnown RBP16.5■□□□□ 0.23
FANCA-210ENST00000563318 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
FANCA-210ENST00000563318 PDGFDQ9GZP0 370 aaPredicted RBP16.5■□□□□ 0.23
FANCA-210ENST00000563318 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
FANCA-210ENST00000563318 ATG3Q9NT62 314 aa16.5■□□□□ 0.23
FANCA-210ENST00000563318 TMOD3Q9NYL9 352 aa16.5■□□□□ 0.23
FANCA-210ENST00000563318 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
FANCA-210ENST00000563318 C5P01031 1676 aa16.5■□□□□ 0.23
FANCA-210ENST00000563318 TAF1LQ8IZX4 1826 aa16.49■□□□□ 0.23
FANCA-210ENST00000563318 MYBBP1AQ9BQG0 1328 aaKnown RBP16.49■□□□□ 0.23
FANCA-210ENST00000563318 ZNF316A6NFI3 1004 aaPredicted RBP16.49■□□□□ 0.23
FANCA-210ENST00000563318 FCHSD2O94868 740 aa16.49■□□□□ 0.23
FANCA-210ENST00000563318 KCNQ4P56696 695 aa16.49■□□□□ 0.23
FANCA-210ENST00000563318 SMARCC1Q92922 1105 aaPredicted RBP16.49■□□□□ 0.23
FANCA-210ENST00000563318 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
FANCA-210ENST00000563318 ASAP1Q9ULH1 1129 aa16.49■□□□□ 0.23
FANCA-210ENST00000563318 TUBGCP6Q96RT7 1819 aa16.49■□□□□ 0.23
FANCA-210ENST00000563318 CEMIPQ8WUJ3 1361 aa16.49■□□□□ 0.23
FANCA-210ENST00000563318 PRKAR2BP31323 418 aa16.48■□□□□ 0.23
FANCA-210ENST00000563318 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
FANCA-210ENST00000563318 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
FANCA-210ENST00000563318 CCNL1Q9UK58 526 aaPredicted RBP16.48■□□□□ 0.23
FANCA-210ENST00000563318 NUDCQ9Y266 331 aa16.48■□□□□ 0.23
FANCA-210ENST00000563318 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
FANCA-210ENST00000563318 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
FANCA-210ENST00000563318 MAP3K5Q99683 1374 aa16.47■□□□□ 0.23
FANCA-210ENST00000563318 COL24A1Q17RW2 1714 aa16.47■□□□□ 0.23
FANCA-210ENST00000563318 U2AF1L5P0DN76 240 aaPredicted RBP16.46■□□□□ 0.23
FANCA-210ENST00000563318 U2AF1Q01081 240 aaKnown RBP eCLIP16.46■□□□□ 0.237e-7■■□□□ 13.3
FANCA-210ENST00000563318 SLC52A2Q9HAB3 445 aa16.46■□□□□ 0.23
FANCA-210ENST00000563318 STK32BQ9NY57 414 aa16.46■□□□□ 0.23
FANCA-210ENST00000563318 SIPA1L3O60292 1781 aaPredicted RBP16.46■□□□□ 0.22
FANCA-210ENST00000563318 C4BP0C0L5 1744 aa16.45■□□□□ 0.22
FANCA-210ENST00000563318 VIRMAQ69YN4 1812 aaKnown RBP16.45■□□□□ 0.22
FANCA-210ENST00000563318 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
FANCA-210ENST00000563318 SIK1P57059 783 aa16.45■□□□□ 0.22
FANCA-210ENST00000563318 NFATC2IPQ8NCF5 419 aa16.45■□□□□ 0.22
FANCA-210ENST00000563318 IL17REQ8NFR9 667 aa16.45■□□□□ 0.22
FANCA-210ENST00000563318 GAS2L2Q8NHY3 880 aa16.45■□□□□ 0.22
FANCA-210ENST00000563318 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
FANCA-210ENST00000563318 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
FANCA-210ENST00000563318 ITPK1Q13572 414 aa16.44■□□□□ 0.22
FANCA-210ENST00000563318 SGIP1Q9BQI5 828 aa16.44■□□□□ 0.22
FANCA-210ENST00000563318 COL5A3P25940 1745 aaPredicted RBP16.44■□□□□ 0.22
FANCA-210ENST00000563318 CABP4P57796 275 aa16.43■□□□□ 0.22
FANCA-210ENST00000563318 AMIGO3Q86WK7 504 aa16.43■□□□□ 0.22
FANCA-210ENST00000563318 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
FANCA-210ENST00000563318 TJP1Q07157 1748 aa16.42■□□□□ 0.22
FANCA-210ENST00000563318 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
FANCA-210ENST00000563318 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
FANCA-210ENST00000563318 PTGER2P43116 358 aa16.41■□□□□ 0.22
FANCA-210ENST00000563318 UBR3Q6ZT12 1888 aa16.41■□□□□ 0.22
FANCA-210ENST00000563318 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
FANCA-210ENST00000563318 MTFR1LQ9H019 292 aa16.38■□□□□ 0.21
FANCA-210ENST00000563318 HMGB2P26583 209 aaKnown RBP16.37■□□□□ 0.21
FANCA-210ENST00000563318 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
FANCA-210ENST00000563318 COL23A1Q86Y22 540 aaPredicted RBP16.37■□□□□ 0.21
FANCA-210ENST00000563318 SLC16A10Q8TF71 515 aa16.37■□□□□ 0.21
FANCA-210ENST00000563318 SPON1Q9HCB6 807 aa16.37■□□□□ 0.21
FANCA-210ENST00000563318 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
FANCA-210ENST00000563318 ZBTB7AO95365 584 aa16.36■□□□□ 0.21
FANCA-210ENST00000563318 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
FANCA-210ENST00000563318 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
FANCA-210ENST00000563318 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
FANCA-210ENST00000563318 MYH14Q7Z406 1995 aaKnown RBP16.36■□□□□ 0.21
FANCA-210ENST00000563318 DLG5Q8TDM6 1919 aa16.35■□□□□ 0.21
FANCA-210ENST00000563318 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
FANCA-210ENST00000563318 UTRNP46939 3433 aa16.34■□□□□ 0.21
FANCA-210ENST00000563318 SSFA2P28290 1259 aa16.34■□□□□ 0.21
FANCA-210ENST00000563318 CCDC184Q52MB2 194 aa16.34■□□□□ 0.21
FANCA-210ENST00000563318 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
FANCA-210ENST00000563318 PTCD1O75127 700 aaKnown RBP16.33■□□□□ 0.2
FANCA-210ENST00000563318 ZNF790Q6PG37 636 aa16.33■□□□□ 0.2
FANCA-210ENST00000563318 MCM10Q7L590 875 aa16.33■□□□□ 0.2
FANCA-210ENST00000563318 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
FANCA-210ENST00000563318 DCTN1Q14203 1278 aa16.32■□□□□ 0.2
FANCA-210ENST00000563318 GOLGB1Q14789 3259 aaKnown RBP16.32■□□□□ 0.2
FANCA-210ENST00000563318 SMIM5Q71RC9 77 aa16.32■□□□□ 0.2
FANCA-210ENST00000563318 FLAD1Q8NFF5 587 aa16.32■□□□□ 0.2
FANCA-210ENST00000563318 ADAMTS8Q9UP79 889 aa16.32■□□□□ 0.2
FANCA-210ENST00000563318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.31■□□□□ 0.2
FANCA-210ENST00000563318 TEFQ10587 303 aa16.31■□□□□ 0.2
FANCA-210ENST00000563318 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
FANCA-210ENST00000563318 ZNF496Q96IT1 587 aaPredicted RBP16.31■□□□□ 0.2
FANCA-210ENST00000563318 AK7Q96M32 723 aa16.31■□□□□ 0.2
FANCA-210ENST00000563318 PNNQ9H307 717 aaKnown RBP16.31■□□□□ 0.2
FANCA-210ENST00000563318 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
FANCA-210ENST00000563318 KCNQ3O43525 872 aa16.3■□□□□ 0.2
FANCA-210ENST00000563318 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
FANCA-210ENST00000563318 CYP19A1P11511 503 aaPredicted RBP16.3■□□□□ 0.2
FANCA-210ENST00000563318 CRKLP46109 303 aaKnown RBP16.3■□□□□ 0.2
FANCA-210ENST00000563318 DNAJC10Q8IXB1 793 aa16.3■□□□□ 0.2
FANCA-210ENST00000563318 KDM3BQ7LBC6 1761 aa16.3■□□□□ 0.2
FANCA-210ENST00000563318 C4AP0C0L4 1744 aa16.3■□□□□ 0.2
FANCA-210ENST00000563318 GNPATO15228 680 aa16.29■□□□□ 0.2
FANCA-210ENST00000563318 TMPOP42166 694 aaKnown RBP16.29■□□□□ 0.2
FANCA-210ENST00000563318 RUNDC1Q96C34 613 aa16.28■□□□□ 0.2
FANCA-210ENST00000563318 MAPK8IP3Q9UPT6 1336 aa16.27■□□□□ 0.2
FANCA-210ENST00000563318 BTBD11A6QL63 1104 aa16.27■□□□□ 0.2
FANCA-210ENST00000563318 RTF1Q92541 710 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms