RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 SIPA1L3O60292 1781 aaPredicted RBP20.13■□□□□ 0.81
EDC3-206ENST00000563009 RTF1Q92541 710 aaKnown RBP20.12■□□□□ 0.81
EDC3-206ENST00000563009 PROM2Q8N271 834 aa20.11■□□□□ 0.81
EDC3-206ENST00000563009 SMARCC1Q92922 1105 aaPredicted RBP20.11■□□□□ 0.81
EDC3-206ENST00000563009 PALLDQ8WX93 1383 aa20.1■□□□□ 0.81
EDC3-206ENST00000563009 PAPPAQ13219 1627 aa20.1■□□□□ 0.81
EDC3-206ENST00000563009 RIPK4P57078 832 aa20.1■□□□□ 0.81
EDC3-206ENST00000563009 MCM10Q7L590 875 aa20.1■□□□□ 0.81
EDC3-206ENST00000563009 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
EDC3-206ENST00000563009 ASAP1Q9ULH1 1129 aa20.1■□□□□ 0.81
EDC3-206ENST00000563009 NUP188Q5SRE5 1749 aa20.1■□□□□ 0.81
EDC3-206ENST00000563009 DCTN1Q14203 1278 aa20.09■□□□□ 0.81
EDC3-206ENST00000563009 TXNRD1Q16881 649 aa20.09■□□□□ 0.81
EDC3-206ENST00000563009 APAF1O14727 1248 aa20.08■□□□□ 0.81
EDC3-206ENST00000563009 LMOD3Q0VAK6 560 aa20.08■□□□□ 0.81
EDC3-206ENST00000563009 TEFQ10587 303 aa20.08■□□□□ 0.81
EDC3-206ENST00000563009 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
EDC3-206ENST00000563009 RRP7AQ9Y3A4 280 aaKnown RBP20.08■□□□□ 0.81
EDC3-206ENST00000563009 SLC27A3Q5K4L6 730 aa20.07■□□□□ 0.8
EDC3-206ENST00000563009 TRIM35Q9UPQ4 493 aa20.06■□□□□ 0.8
EDC3-206ENST00000563009 ZNF831Q5JPB2 1677 aa20.06■□□□□ 0.8
EDC3-206ENST00000563009 NEUROD2Q15784 382 aa20.05■□□□□ 0.8
EDC3-206ENST00000563009 LRRC4BQ9NT99 713 aa20.05■□□□□ 0.8
EDC3-206ENST00000563009 UBR2Q8IWV8 1755 aa20.04■□□□□ 0.8
EDC3-206ENST00000563009 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
EDC3-206ENST00000563009 THUMPD2Q9BTF0 503 aaKnown RBP20.04■□□□□ 0.8
EDC3-206ENST00000563009 LOC102724428A0A0B4J2F2 783 aa20.03■□□□□ 0.8
EDC3-206ENST00000563009 SIK1P57059 783 aa20.03■□□□□ 0.8
EDC3-206ENST00000563009 CCNL1Q9UK58 526 aaPredicted RBP20.03■□□□□ 0.8
EDC3-206ENST00000563009 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.8
EDC3-206ENST00000563009 SLC39A6Q13433 755 aa20.02■□□□□ 0.8
EDC3-206ENST00000563009 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
EDC3-206ENST00000563009 CICQ96RK0 1608 aaPredicted RBP20.02■□□□□ 0.79
EDC3-206ENST00000563009 BTBD11A6QL63 1104 aa20.01■□□□□ 0.79
EDC3-206ENST00000563009 CCDC27Q2M243 656 aa20.01■□□□□ 0.79
EDC3-206ENST00000563009 ZNF790Q6PG37 636 aa20.01■□□□□ 0.79
EDC3-206ENST00000563009 TAF1LQ8IZX4 1826 aa20.01■□□□□ 0.79
EDC3-206ENST00000563009 C5P01031 1676 aa20■□□□□ 0.79
EDC3-206ENST00000563009 KCNQ4P56696 695 aa20■□□□□ 0.79
EDC3-206ENST00000563009 SLC4A9Q96Q91 983 aa20■□□□□ 0.79
EDC3-206ENST00000563009 KDM3BQ7LBC6 1761 aa19.99■□□□□ 0.79
EDC3-206ENST00000563009 PTCD1O75127 700 aaKnown RBP19.98■□□□□ 0.79
EDC3-206ENST00000563009 HMGB2P26583 209 aaKnown RBP19.98■□□□□ 0.79
EDC3-206ENST00000563009 ATP6V1AP38606 617 aa19.98■□□□□ 0.79
EDC3-206ENST00000563009 TTC5Q8N0Z6 440 aa19.98■□□□□ 0.79
EDC3-206ENST00000563009 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
EDC3-206ENST00000563009 BABAM1Q9NWV8 329 aa19.98■□□□□ 0.79
EDC3-206ENST00000563009 TJP1Q07157 1748 aa19.97■□□□□ 0.79
EDC3-206ENST00000563009 ITPK1Q13572 414 aa19.97■□□□□ 0.79
EDC3-206ENST00000563009 NGEFQ8N5V2 710 aa19.97■□□□□ 0.79
EDC3-206ENST00000563009 ANO8Q9HCE9 1232 aaPredicted RBP19.97■□□□□ 0.79
EDC3-206ENST00000563009 COL5A3P25940 1745 aaPredicted RBP19.96■□□□□ 0.79
EDC3-206ENST00000563009 KCNQ3O43525 872 aa19.96■□□□□ 0.79
EDC3-206ENST00000563009 NBPF14Q5TI25 921 aa19.96■□□□□ 0.79
EDC3-206ENST00000563009 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
EDC3-206ENST00000563009 ZNF496Q96IT1 587 aaPredicted RBP19.96■□□□□ 0.79
EDC3-206ENST00000563009 C4BP0C0L5 1744 aa19.96■□□□□ 0.79
EDC3-206ENST00000563009 WWC1Q8IX03 1113 aa19.95■□□□□ 0.78
EDC3-206ENST00000563009 AKT1S1Q96B36 256 aa19.95■□□□□ 0.78
EDC3-206ENST00000563009 MIS18AQ9NYP9 233 aa19.95■□□□□ 0.78
EDC3-206ENST00000563009 SENP3-EIF4A1A0A087X0R7 540 aa19.94■□□□□ 0.78
EDC3-206ENST00000563009 CALD1Q05682 793 aaKnown RBP19.94■□□□□ 0.78
EDC3-206ENST00000563009 LINC00116Q8NCU8 138 aa19.94■□□□□ 0.78
EDC3-206ENST00000563009 FMNL2Q96PY5 1086 aa19.94■□□□□ 0.78
EDC3-206ENST00000563009 HEG1Q9ULI3 1381 aa19.94■□□□□ 0.78
EDC3-206ENST00000563009 CHL1O00533 1208 aa19.93■□□□□ 0.78
EDC3-206ENST00000563009 SLC15A2Q16348 729 aa19.93■□□□□ 0.78
EDC3-206ENST00000563009 ZNF827Q17R98 1081 aa19.93■□□□□ 0.78
EDC3-206ENST00000563009 STK32BQ9NY57 414 aa19.93■□□□□ 0.78
EDC3-206ENST00000563009 ZNF853P0CG23 659 aa19.92■□□□□ 0.78
EDC3-206ENST00000563009 CFAP44Q96MT7 982 aa19.92■□□□□ 0.78
EDC3-206ENST00000563009 TSPYL4Q9UJ04 414 aa19.92■□□□□ 0.78
EDC3-206ENST00000563009 QSER1Q2KHR3 1735 aa19.92■□□□□ 0.78
EDC3-206ENST00000563009 IFT57Q9NWB7 429 aa19.91■□□□□ 0.78
EDC3-206ENST00000563009 TUBGCP6Q96RT7 1819 aa19.9■□□□□ 0.78
EDC3-206ENST00000563009 EIF4A1P60842 406 aaKnown RBP19.9■□□□□ 0.78
EDC3-206ENST00000563009 R3HDM1Q15032 1099 aaKnown RBP19.9■□□□□ 0.78
EDC3-206ENST00000563009 DNAJC10Q8IXB1 793 aa19.9■□□□□ 0.78
EDC3-206ENST00000563009 CNTNAP4Q9C0A0 1308 aa19.9■□□□□ 0.78
EDC3-206ENST00000563009 IL16Q14005 1332 aa19.89■□□□□ 0.77
EDC3-206ENST00000563009 RC3H1Q5TC82 1133 aaKnown RBP19.89■□□□□ 0.77
EDC3-206ENST00000563009 MYH14Q7Z406 1995 aaKnown RBP19.89■□□□□ 0.77
EDC3-206ENST00000563009 TEX13AQ9BXU3 409 aaPredicted RBP19.89■□□□□ 0.77
EDC3-206ENST00000563009 SALL2Q9Y467 1007 aaPredicted RBP19.89■□□□□ 0.77
EDC3-206ENST00000563009 UBR3Q6ZT12 1888 aa19.88■□□□□ 0.77
EDC3-206ENST00000563009 ZNF521Q96K83 1311 aa19.88■□□□□ 0.77
EDC3-206ENST00000563009 SNRPA1P09661 255 aaKnown RBP19.88■□□□□ 0.77
EDC3-206ENST00000563009 CYP19A1P11511 503 aaPredicted RBP19.88■□□□□ 0.77
EDC3-206ENST00000563009 GNAI1P63096 354 aa19.88■□□□□ 0.77
EDC3-206ENST00000563009 WDR63Q8IWG1 891 aa19.88■□□□□ 0.77
EDC3-206ENST00000563009 LAS1LQ9Y4W2 734 aaKnown RBP19.88■□□□□ 0.77
EDC3-206ENST00000563009 AK7Q96M32 723 aa19.87■□□□□ 0.77
EDC3-206ENST00000563009 MBIPQ9NS73 344 aa19.87■□□□□ 0.77
EDC3-206ENST00000563009 LAMB4A4D0S4 1761 aa19.86■□□□□ 0.77
EDC3-206ENST00000563009 CASZ1Q86V15 1759 aa19.86■□□□□ 0.77
EDC3-206ENST00000563009 PSDA5PKW4 1024 aaPredicted RBP19.86■□□□□ 0.77
EDC3-206ENST00000563009 GIGYF1O75420 1035 aaPredicted RBP19.86■□□□□ 0.77
EDC3-206ENST00000563009 CRKLP46109 303 aaKnown RBP19.86■□□□□ 0.77
EDC3-206ENST00000563009 INTS5Q6P9B9 1019 aaKnown RBP19.86■□□□□ 0.77
EDC3-206ENST00000563009 TFCP2L1Q9NZI6 479 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms