RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 U2AF1Q01081 240 aaKnown RBP eCLIP24.97■■□□□ 1.59
PKD1-223ENST00000561668 AK7Q96M32 723 aa24.97■■□□□ 1.59
PKD1-223ENST00000561668 PNPLA7Q6ZV29 1317 aa24.96■■□□□ 1.59
PKD1-223ENST00000561668 MYBBP1AQ9BQG0 1328 aaKnown RBP24.96■■□□□ 1.59
PKD1-223ENST00000561668 KDM6AO15550 1401 aaPredicted RBP24.95■■□□□ 1.59
PKD1-223ENST00000561668 GAS2L2Q8NHY3 880 aa24.95■■□□□ 1.58
PKD1-223ENST00000561668 LGR6Q9HBX8 967 aa24.94■■□□□ 1.58
PKD1-223ENST00000561668 RNMTO43148 476 aaKnown RBP24.93■■□□□ 1.58
PKD1-223ENST00000561668 POLD1P28340 1107 aa24.93■■□□□ 1.58
PKD1-223ENST00000561668 PTGER2P43116 358 aa24.93■■□□□ 1.58
PKD1-223ENST00000561668 C5P01031 1676 aa24.93■■□□□ 1.58
PKD1-223ENST00000561668 FCHSD2O94868 740 aa24.92■■□□□ 1.58
PKD1-223ENST00000561668 PRKAR2BP31323 418 aa24.92■■□□□ 1.58
PKD1-223ENST00000561668 SLC52A2Q9HAB3 445 aa24.92■■□□□ 1.58
PKD1-223ENST00000561668 DCAF8L1A6NGE4 600 aa24.91■■□□□ 1.58
PKD1-223ENST00000561668 GNAT3A8MTJ3 354 aa24.91■■□□□ 1.58
PKD1-223ENST00000561668 NEFMP07197 916 aa24.91■■□□□ 1.58
PKD1-223ENST00000561668 COL23A1Q86Y22 540 aaPredicted RBP24.91■■□□□ 1.58
PKD1-223ENST00000561668 QSER1Q2KHR3 1735 aa24.9■■□□□ 1.58
PKD1-223ENST00000561668 PTCD1O75127 700 aaKnown RBP24.9■■□□□ 1.58
PKD1-223ENST00000561668 LINC00116Q8NCU8 138 aa24.9■■□□□ 1.58
PKD1-223ENST00000561668 ITPK1Q13572 414 aa24.89■■□□□ 1.58
PKD1-223ENST00000561668 ARXQ96QS3 562 aa24.89■■□□□ 1.58
PKD1-223ENST00000561668 RSPH6AQ9H0K4 717 aa24.89■■□□□ 1.58
PKD1-223ENST00000561668 TAF1LQ8IZX4 1826 aa24.89■■□□□ 1.57
PKD1-223ENST00000561668 PHF14O94880 888 aa24.87■■□□□ 1.57
PKD1-223ENST00000561668 TEFQ10587 303 aa24.87■■□□□ 1.57
PKD1-223ENST00000561668 PHACTR3Q96KR7 559 aa24.87■■□□□ 1.57
PKD1-223ENST00000561668 SCN11AQ9UI33 1791 aa24.87■■□□□ 1.57
PKD1-223ENST00000561668 C4BP0C0L5 1744 aa24.86■■□□□ 1.57
PKD1-223ENST00000561668 GNPATO15228 680 aa24.86■■□□□ 1.57
PKD1-223ENST00000561668 SGIP1Q9BQI5 828 aa24.86■■□□□ 1.57
PKD1-223ENST00000561668 PNNQ9H307 717 aaKnown RBP24.86■■□□□ 1.57
PKD1-223ENST00000561668 MAP3K5Q99683 1374 aa24.85■■□□□ 1.57
PKD1-223ENST00000561668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.85■■□□□ 1.57
PKD1-223ENST00000561668 SSFA2P28290 1259 aa24.85■■□□□ 1.57
PKD1-223ENST00000561668 RTF1Q92541 710 aaKnown RBP24.84■■□□□ 1.57
PKD1-223ENST00000561668 RTCBQ9Y3I0 505 aaKnown RBP24.84■■□□□ 1.57
PKD1-223ENST00000561668 RC3H1Q5TC82 1133 aaKnown RBP24.83■■□□□ 1.57
PKD1-223ENST00000561668 SLC4A9Q96Q91 983 aa24.83■■□□□ 1.57
PKD1-223ENST00000561668 TUBGCP6Q96RT7 1819 aa24.83■■□□□ 1.57
PKD1-223ENST00000561668 TRAPPC3LQ5T215 181 aa24.82■■□□□ 1.56
PKD1-223ENST00000561668 TTC5Q8N0Z6 440 aa24.82■■□□□ 1.56
PKD1-223ENST00000561668 FHDC1Q9C0D6 1143 aaPredicted RBP24.82■■□□□ 1.56
PKD1-223ENST00000561668 SLC39A6Q13433 755 aa24.81■■□□□ 1.56
PKD1-223ENST00000561668 KLHL34Q8N239 644 aa24.81■■□□□ 1.56
PKD1-223ENST00000561668 IL17REQ8NFR9 667 aa24.81■■□□□ 1.56
PKD1-223ENST00000561668 SYT17Q9BSW7 474 aa24.81■■□□□ 1.56
PKD1-223ENST00000561668 MSL1Q68DK7 614 aa24.8■■□□□ 1.56
PKD1-223ENST00000561668 ADAMTS7Q9UKP4 1686 aa24.8■■□□□ 1.56
PKD1-223ENST00000561668 SMIM5Q71RC9 77 aa24.78■■□□□ 1.56
PKD1-223ENST00000561668 PLEKHF1Q96S99 279 aa24.78■■□□□ 1.56
PKD1-223ENST00000561668 CNTNAP4Q9C0A0 1308 aa24.78■■□□□ 1.56
PKD1-223ENST00000561668 ZNF831Q5JPB2 1677 aa24.78■■□□□ 1.56
PKD1-223ENST00000561668 RPS6KA4O75676 772 aa24.77■■□□□ 1.56
PKD1-223ENST00000561668 VIRMAQ69YN4 1812 aaKnown RBP24.77■■□□□ 1.56
PKD1-223ENST00000561668 HTATSF1O43719 755 aaKnown RBP24.76■■□□□ 1.55
PKD1-223ENST00000561668 ADRA2BP18089 450 aa24.76■■□□□ 1.55
PKD1-223ENST00000561668 RFC4P35249 363 aa24.76■■□□□ 1.55
PKD1-223ENST00000561668 AMIGO3Q86WK7 504 aa24.76■■□□□ 1.55
PKD1-223ENST00000561668 MRC1P22897 1456 aa24.76■■□□□ 1.55
PKD1-223ENST00000561668 UBR3Q6ZT12 1888 aa24.75■■□□□ 1.55
PKD1-223ENST00000561668 ANP32CO43423 234 aa24.75■■□□□ 1.55
PKD1-223ENST00000561668 CRKLP46109 303 aaKnown RBP24.75■■□□□ 1.55
PKD1-223ENST00000561668 MAPK8IP3Q9UPT6 1336 aa24.75■■□□□ 1.55
PKD1-223ENST00000561668 ZNF790Q6PG37 636 aa24.74■■□□□ 1.55
PKD1-223ENST00000561668 DNAJC10Q8IXB1 793 aa24.74■■□□□ 1.55
PKD1-223ENST00000561668 VSIG10Q8N0Z9 540 aa24.74■■□□□ 1.55
PKD1-223ENST00000561668 BTBD11A6QL63 1104 aa24.73■■□□□ 1.55
PKD1-223ENST00000561668 ARHGEF1Q92888 912 aaKnown RBP24.73■■□□□ 1.55
PKD1-223ENST00000561668 MCM10Q7L590 875 aa24.72■■□□□ 1.55
PKD1-223ENST00000561668 CEMIPQ8WUJ3 1361 aa24.71■■□□□ 1.55
PKD1-223ENST00000561668 STARD3NLO95772 234 aa24.71■■□□□ 1.55
PKD1-223ENST00000561668 NLGN1Q8N2Q7 840 aa24.71■■□□□ 1.55
PKD1-223ENST00000561668 TEX13AQ9BXU3 409 aaPredicted RBP24.71■■□□□ 1.55
PKD1-223ENST00000561668 CCDC87Q9NVE4 849 aa24.71■■□□□ 1.55
PKD1-223ENST00000561668 COL5A3P25940 1745 aaPredicted RBP24.69■■□□□ 1.54
PKD1-223ENST00000561668 CYP19A1P11511 503 aaPredicted RBP24.69■■□□□ 1.54
PKD1-223ENST00000561668 WDR43Q15061 677 aaKnown RBP eCLIP24.69■■□□□ 1.54
PKD1-223ENST00000561668 FMNL2Q96PY5 1086 aa24.69■■□□□ 1.54
PKD1-223ENST00000561668 COL24A1Q17RW2 1714 aa24.69■■□□□ 1.54
PKD1-223ENST00000561668 DCTN1Q14203 1278 aa24.68■■□□□ 1.54
PKD1-223ENST00000561668 CCDC184Q52MB2 194 aa24.68■■□□□ 1.54
PKD1-223ENST00000561668 INTS5Q6P9B9 1019 aaKnown RBP24.68■■□□□ 1.54
PKD1-223ENST00000561668 ZNF496Q96IT1 587 aaPredicted RBP24.68■■□□□ 1.54
PKD1-223ENST00000561668 NFE2L2Q16236 605 aa24.67■■□□□ 1.54
PKD1-223ENST00000561668 ADAMTS8Q9UP79 889 aa24.67■■□□□ 1.54
PKD1-223ENST00000561668 TAF7Q15545 349 aaPredicted RBP24.66■■□□□ 1.54
PKD1-223ENST00000561668 CD2APQ9Y5K6 639 aa24.66■■□□□ 1.54
PKD1-223ENST00000561668 ZPR1O75312 459 aa24.65■■□□□ 1.54
PKD1-223ENST00000561668 KCPQ6ZWJ8 1503 aa24.65■■□□□ 1.54
PKD1-223ENST00000561668 HEG1Q9ULI3 1381 aa24.65■■□□□ 1.54
PKD1-223ENST00000561668 GPR162Q16538 588 aa24.64■■□□□ 1.54
PKD1-223ENST00000561668 NPM2Q86SE8 214 aaKnown RBP24.64■■□□□ 1.54
PKD1-223ENST00000561668 TJP1Q07157 1748 aa24.64■■□□□ 1.53
PKD1-223ENST00000561668 MMP10P09238 476 aa24.63■■□□□ 1.53
PKD1-223ENST00000561668 PNISRQ8TF01 805 aaKnown RBP24.63■■□□□ 1.53
PKD1-223ENST00000561668 MYH14Q7Z406 1995 aaKnown RBP24.63■■□□□ 1.53
PKD1-223ENST00000561668 GYS1P13807 737 aa24.62■■□□□ 1.53
PKD1-223ENST00000561668 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms