RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 MCM10Q7L590 875 aa15.23■□□□□ 0.03
HERC1-214ENST00000561400 THUMPD2Q9BTF0 503 aaKnown RBP15.23■□□□□ 0.03
HERC1-214ENST00000561400 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
HERC1-214ENST00000561400 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
HERC1-214ENST00000561400 HTATSF1O43719 755 aaKnown RBP15.21■□□□□ 0.03
HERC1-214ENST00000561400 CCDC27Q2M243 656 aa15.21■□□□□ 0.03
HERC1-214ENST00000561400 WWC1Q8IX03 1113 aa15.21■□□□□ 0.03
HERC1-214ENST00000561400 RTF1Q92541 710 aaKnown RBP15.21■□□□□ 0.03
HERC1-214ENST00000561400 DCAF5Q96JK2 942 aa15.21■□□□□ 0.03
HERC1-214ENST00000561400 DOT1LQ8TEK3 1739 aa15.21■□□□□ 0.03
HERC1-214ENST00000561400 ITGB4P16144 1822 aa15.21■□□□□ 0.03
HERC1-214ENST00000561400 RNMTO43148 476 aaKnown RBP15.21■□□□□ 0.03
HERC1-214ENST00000561400 MSH5O43196 834 aa15.21■□□□□ 0.03
HERC1-214ENST00000561400 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.03
HERC1-214ENST00000561400 CEMIPQ8WUJ3 1361 aa15.21■□□□□ 0.03
HERC1-214ENST00000561400 SBF2Q86WG5 1849 aa15.2■□□□□ 0.02
HERC1-214ENST00000561400 RBM10P98175 930 aaKnown RBP15.2■□□□□ 0.02
HERC1-214ENST00000561400 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
HERC1-214ENST00000561400 LMOD3Q0VAK6 560 aa15.2■□□□□ 0.02
HERC1-214ENST00000561400 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
HERC1-214ENST00000561400 SIPA1L3O60292 1781 aaPredicted RBP15.19■□□□□ 0.02
HERC1-214ENST00000561400 RBM19Q9Y4C8 960 aaKnown RBP15.19■□□□□ 0.02
HERC1-214ENST00000561400 TULP1O00294 542 aaPredicted RBP15.18■□□□□ 0.02
HERC1-214ENST00000561400 BCL9O00512 1426 aa15.17■□□□□ 0.02
HERC1-214ENST00000561400 ACSBG1Q96GR2 724 aa15.17■□□□□ 0.02
HERC1-214ENST00000561400 MRC1P22897 1456 aa15.17■□□□□ 0.02
HERC1-214ENST00000561400 ERVV-2B6SEH9 535 aa15.16■□□□□ 0.02
HERC1-214ENST00000561400 NFATC2IPQ8NCF5 419 aa15.16■□□□□ 0.02
HERC1-214ENST00000561400 ZBED9Q6R2W3 1325 aa15.16■□□□□ 0.02
HERC1-214ENST00000561400 KCNQ2O43526 872 aa15.16■□□□□ 0.02
HERC1-214ENST00000561400 PRIM1P49642 420 aaKnown RBP15.16■□□□□ 0.02
HERC1-214ENST00000561400 TEFQ10587 303 aa15.16■□□□□ 0.02
HERC1-214ENST00000561400 SLC52A2Q9HAB3 445 aa15.16■□□□□ 0.02
HERC1-214ENST00000561400 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
HERC1-214ENST00000561400 CABP4P57796 275 aa15.15■□□□□ 0.02
HERC1-214ENST00000561400 FAM196AQ6ZSG2 479 aa15.15■□□□□ 0.02
HERC1-214ENST00000561400 PTF1AQ7RTS3 328 aa15.15■□□□□ 0.02
HERC1-214ENST00000561400 WDR63Q8IWG1 891 aa15.15■□□□□ 0.02
HERC1-214ENST00000561400 SYTL4Q96C24 671 aaPredicted RBP15.15■□□□□ 0.02
HERC1-214ENST00000561400 NHSQ6T4R5 1651 aa15.14■□□□□ 0.01
HERC1-214ENST00000561400 TAF7Q15545 349 aaPredicted RBP15.13■□□□□ 0.01
HERC1-214ENST00000561400 PIGBQ92521 554 aa15.13■□□□□ 0.01
HERC1-214ENST00000561400 MIS18AQ9NYP9 233 aa15.13■□□□□ 0.01
HERC1-214ENST00000561400 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
HERC1-214ENST00000561400 TMOD3Q9NYL9 352 aa15.13■□□□□ 0.01
HERC1-214ENST00000561400 LAS1LQ9Y4W2 734 aaKnown RBP15.12■□□□□ 0.01
HERC1-214ENST00000561400 BTAF1O14981 1849 aa15.12■□□□□ 0.01
HERC1-214ENST00000561400 KDM3BQ7LBC6 1761 aa15.12■□□□□ 0.01
HERC1-214ENST00000561400 ZNF853P0CG23 659 aa15.12■□□□□ 0.01
HERC1-214ENST00000561400 CALD1Q05682 793 aaKnown RBP15.12■□□□□ 0.01
HERC1-214ENST00000561400 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
HERC1-214ENST00000561400 CFAP44Q96MT7 982 aa15.12■□□□□ 0.01
HERC1-214ENST00000561400 IL16Q14005 1332 aa15.11■□□□□ 0.01
HERC1-214ENST00000561400 IL27Q8NEV9 243 aa15.11■□□□□ 0.01
HERC1-214ENST00000561400 BTBD11A6QL63 1104 aa15.11■□□□□ 0.01
HERC1-214ENST00000561400 CHL1O00533 1208 aa15.11■□□□□ 0.01
HERC1-214ENST00000561400 SLC39A6Q13433 755 aa15.11■□□□□ 0.01
HERC1-214ENST00000561400 IFT57Q9NWB7 429 aa15.11■□□□□ 0.01
HERC1-214ENST00000561400 PAPPAQ13219 1627 aa15.1■□□□□ 0.01
HERC1-214ENST00000561400 TRIM37O94972 964 aa15.1■□□□□ 0.01
HERC1-214ENST00000561400 KCNQ3O43525 872 aa15.09■□□□□ 0.01
HERC1-214ENST00000561400 GNAI1P63096 354 aa15.09■□□□□ 0.01
HERC1-214ENST00000561400 SLFN5Q08AF3 891 aa15.09■□□□□ 0.01
HERC1-214ENST00000561400 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
HERC1-214ENST00000561400 TSR2Q969E8 191 aaKnown RBP15.09■□□□□ 0.01
HERC1-214ENST00000561400 MBIPQ9NS73 344 aa15.09■□□□□ 0.01
HERC1-214ENST00000561400 ASAP1Q9ULH1 1129 aa15.09■□□□□ 0.01
HERC1-214ENST00000561400 TSPYL4Q9UJ04 414 aa15.09■□□□□ 0.01
HERC1-214ENST00000561400 ATG3Q9NT62 314 aa15.08■□□□□ 0
HERC1-214ENST00000561400 UBR2Q8IWV8 1755 aa15.08■□□□□ 0
HERC1-214ENST00000561400 ZNF790Q6PG37 636 aa15.08■□□□□ 0
HERC1-214ENST00000561400 TNS1Q9HBL0 1735 aaKnown RBP15.07■□□□□ 0
HERC1-214ENST00000561400 E9PSI1 815 aa15.07■□□□□ 0
HERC1-214ENST00000561400 TRMT2AQ8IZ69 625 aaKnown RBP15.07■□□□□ 0
HERC1-214ENST00000561400 BABAM1Q9NWV8 329 aa15.07■□□□□ 0
HERC1-214ENST00000561400 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
HERC1-214ENST00000561400 DUSP27Q5VZP5 1158 aa15.06■□□□□ 0
HERC1-214ENST00000561400 ILDR2Q71H61 639 aa15.06■□□□□ 0
HERC1-214ENST00000561400 MYH16Q9H6N6 1097 aa15.05■□□□□ 0
HERC1-214ENST00000561400 KCPQ6ZWJ8 1503 aa15.05■□□□□ 0
HERC1-214ENST00000561400 KRT24Q2M2I5 525 aa15.05■□□□□ -0
HERC1-214ENST00000561400 PTCD1O75127 700 aaKnown RBP15.04■□□□□ -0
HERC1-214ENST00000561400 EIF4A1P60842 406 aaKnown RBP15.04■□□□□ -0
HERC1-214ENST00000561400 ZNF496Q96IT1 587 aaPredicted RBP15.04■□□□□ -0
HERC1-214ENST00000561400 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
HERC1-214ENST00000561400 LY75O60449 1722 aa15.04■□□□□ -0
HERC1-214ENST00000561400 PALLDQ8WX93 1383 aa15.03■□□□□ -0
HERC1-214ENST00000561400 HEG1Q9ULI3 1381 aa15.03■□□□□ -0
HERC1-214ENST00000561400 CHMP4AQ9BY43 222 aa15.02■□□□□ -0
HERC1-214ENST00000561400 C5P01031 1676 aa15.02■□□□□ -0
HERC1-214ENST00000561400 BRD2P25440 801 aaKnown RBP15.02□□□□□ -0.01
HERC1-214ENST00000561400 EXOSC9Q06265 439 aaKnown RBP15.02□□□□□ -0.01
HERC1-214ENST00000561400 C8orf58Q8NAV2 365 aa15.02□□□□□ -0.01
HERC1-214ENST00000561400 SMARCC1Q92922 1105 aaPredicted RBP15.02□□□□□ -0.01
HERC1-214ENST00000561400 SLC4A9Q96Q91 983 aa15.02□□□□□ -0.01
HERC1-214ENST00000561400 APBA3O96018 575 aa15.01□□□□□ -0.01
HERC1-214ENST00000561400 TSPYL6Q8N831 410 aa15.01□□□□□ -0.01
HERC1-214ENST00000561400 RBM42Q9BTD8 480 aaKnown RBP15.01□□□□□ -0.01
HERC1-214ENST00000561400 PRAMEF22A3QJZ6 481 aa15.01□□□□□ -0.01
HERC1-214ENST00000561400 ELL2O00472 640 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms